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For: Sewatanon J, Srichatrapimuk S, Auewarakul P. Compositional bias and size of genomes of human DNA viruses. Intervirology 2006;50:123-32. [PMID: 17191014 DOI: 10.1159/000098238] [Citation(s) in RCA: 16] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2006] [Accepted: 07/27/2006] [Indexed: 11/19/2022]  Open
Number Cited by Other Article(s)
1
Deb B, Uddin A, Chakraborty S. Composition, codon usage pattern, protein properties, and influencing factors in the genomes of members of the family Anelloviridae. Arch Virol 2021;166:461-474. [PMID: 33392821 PMCID: PMC7779081 DOI: 10.1007/s00705-020-04890-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2020] [Accepted: 10/02/2020] [Indexed: 01/31/2023]
2
Dutta R, Buragohain L, Borah P. Analysis of codon usage of severe acute respiratory syndrome corona virus 2 (SARS-CoV-2) and its adaptability in dog. Virus Res 2020;288:198113. [PMID: 32771430 PMCID: PMC7410794 DOI: 10.1016/j.virusres.2020.198113] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2020] [Revised: 08/02/2020] [Accepted: 08/03/2020] [Indexed: 01/10/2023]
3
Analysis of the codon usage pattern in Middle East Respiratory Syndrome Coronavirus. Oncotarget 2017;8:110337-110349. [PMID: 29299151 PMCID: PMC5746386 DOI: 10.18632/oncotarget.22738] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 10/27/2017] [Indexed: 11/25/2022]  Open
4
Tian XT, Li BY, Zhang L, Jiao WQ, Liu JX. Bioinformatics analysis of rabbit haemorrhagic disease virus genome. Virol J 2011;8:494. [PMID: 22044910 PMCID: PMC3377956 DOI: 10.1186/1743-422x-8-494] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2011] [Accepted: 11/01/2011] [Indexed: 11/10/2022]  Open
5
Gu YX, Zhang J, Zhou JH, Zhao F, Liu WQ, Wang M, Chen HT, Ma LN, Ding YZ, Liu YS. Comparative analysis of ovine adenovirus 287 and human adenovirus 2 and 5 based on their codon usage. DNA Cell Biol 2011;31:360-6. [PMID: 21810025 DOI: 10.1089/dna.2011.1256] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/13/2022]  Open
6
RoyChoudhury S, Mukherjee D. A detailed comparative analysis on the overall codon usage pattern in herpesviruses. Virus Res 2010;148:31-43. [DOI: 10.1016/j.virusres.2009.11.018] [Citation(s) in RCA: 47] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2009] [Revised: 11/27/2009] [Accepted: 11/30/2009] [Indexed: 11/30/2022]
7
Evolution of the sequence composition of Flaviviruses. INFECTION GENETICS AND EVOLUTION 2010;10:129-36. [DOI: 10.1016/j.meegid.2009.11.004] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2009] [Revised: 10/26/2009] [Accepted: 11/03/2009] [Indexed: 11/20/2022]
8
Shi L, Li H, Ma G, Zhou J, Hong L, Zheng X, Wu Y, Wang Y, Yan Y. Competitive replication of different genotypes of infectious bursal disease virus on chicken embryo fibroblasts. Virus Genes 2008;39:46-52. [DOI: 10.1007/s11262-008-0313-2] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/07/2008] [Accepted: 11/28/2008] [Indexed: 10/21/2022]
9
An extensive analysis on the global codon usage pattern of baculoviruses. Arch Virol 2008;153:2273-82. [DOI: 10.1007/s00705-008-0260-1] [Citation(s) in RCA: 30] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2008] [Accepted: 10/27/2008] [Indexed: 12/18/2022]
10
Analysis of synonymous codon usage in classical swine fever virus. Virus Genes 2008;38:104-12. [PMID: 18958611 PMCID: PMC7089228 DOI: 10.1007/s11262-008-0296-z] [Citation(s) in RCA: 89] [Impact Index Per Article: 5.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2008] [Accepted: 10/09/2008] [Indexed: 01/27/2023]
11
Greenbaum BD, Levine AJ, Bhanot G, Rabadan R. Patterns of evolution and host gene mimicry in influenza and other RNA viruses. PLoS Pathog 2008;4:e1000079. [PMID: 18535658 PMCID: PMC2390760 DOI: 10.1371/journal.ppat.1000079] [Citation(s) in RCA: 192] [Impact Index Per Article: 12.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2008] [Accepted: 04/25/2008] [Indexed: 12/25/2022]  Open
12
Woo PC, Wong BH, Huang Y, Lau SK, Yuen KY. Cytosine deamination and selection of CpG suppressed clones are the two major independent biological forces that shape codon usage bias in coronaviruses. Virology 2007;369:431-42. [PMID: 17881030 PMCID: PMC7103290 DOI: 10.1016/j.virol.2007.08.010] [Citation(s) in RCA: 66] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2007] [Revised: 08/02/2007] [Accepted: 08/07/2007] [Indexed: 12/01/2022]
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