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Janežič M, Dileep KV, Zhang KYJ. A multidimensional computational exploration of congenital myasthenic syndrome causing mutations in human choline acetyltransferase. J Cell Biochem 2021; 122:787-800. [PMID: 33650116 DOI: 10.1002/jcb.29913] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 02/08/2021] [Accepted: 02/09/2021] [Indexed: 11/09/2022]
Abstract
Missense mutations of human choline acetyltransferase (CHAT) are mainly associated with congenital myasthenic syndrome (CMS). To date, several pathogenic mutations have been reported, but due to the rarity and genetic complexity of CMS and difficult genotype-phenotype correlations, the CHAT mutations, and their consequences are underexplored. In this study, we systematically sift through the available genetic data in search of previously unreported pathogenic mutations and use a dynamic in silico model to provide structural explanations for the pathogenicity of the reported deleterious and undetermined variants. Through rigorous multiparameter analyses, we conclude that mutations can affect CHAT through a variety of different mechanisms: by disrupting the secondary structure, by perturbing the P-loop through long-range allosteric interactions, by disrupting the domain connecting loop, and by affecting the phosphorylation process. This study provides the first dynamic look at how mutations affect the structure and catalytic activity in CHAT and highlights the need for further genomic research to better understand the pathology of CHAT.
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Affiliation(s)
- Matej Janežič
- Laboratory for Structural Bioinformatics, Center for Biosystems Dynamics Research, RIKEN, Yokohama, Kanagawa, Japan.,Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, Japan
| | - Kalarickal V Dileep
- Laboratory for Structural Bioinformatics, Center for Biosystems Dynamics Research, RIKEN, Yokohama, Kanagawa, Japan
| | - Kam Y J Zhang
- Laboratory for Structural Bioinformatics, Center for Biosystems Dynamics Research, RIKEN, Yokohama, Kanagawa, Japan.,Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, Japan
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Yiş U, Becker K, Kurul SH, Uyanik G, Bayram E, Haliloğlu G, Polat Aİ, Ayanoğlu M, Okur D, Tosun AF, Serdaroğlu G, Yilmaz S, Topaloğlu H, Anlar B, Cirak S, Engel AG. Genetic Landscape of Congenital Myasthenic Syndromes From Turkey: Novel Mutations and Clinical Insights. J Child Neurol 2017; 32:759-765. [PMID: 28464723 PMCID: PMC5655993 DOI: 10.1177/0883073817705252] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Congenital myasthenic syndromes are clinically and genetically heterogeneous disorders of neuromuscular transmission. Most are treatable, but certain subtypes worsen with cholinesterase inhibitors. This underlines the importance of genetic diagnosis. Here, the authors report on cases with genetically proven congenital myasthenic syndromes from Turkey. The authors retrospectively reviewed their experience of all patients with congenital myasthenic syndromes, referred over a 5-year period (2011-2016) to the Child Neurology Department of Dokuz Eylül University, Izmir, Turkey. In addition, PubMed was searched for published cases of genetically proven congenital myasthenic syndromes originating from Turkey. In total, the authors identified 43 (8 new patients, 35 recently published patients) cases. Defects in the acetylcholine receptor (n = 15; 35%) were the most common type, followed by synaptic basal-lamina associated (n = 14; 33%) and presynaptic syndromes (n = 10; 23%). The authors had only 3 cases (7%) who had defects in endplate development. One patient had mutation GFPT1 gene (n = 1; 2%). Knowledge on congenital myasthenic syndromes and related genes in Turkey will lead to prompt diagnosis and treatment of these rare neuromuscular disorders.
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Affiliation(s)
- Uluç Yiş
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Kerstin Becker
- Cologne University, Department of Pediatrics, Center for Molecular Medicine Cologne, Cologne, GERMANY
| | - Semra Hız Kurul
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Gökhan Uyanik
- Center for Medical Genetics, Hanusch Hospital, Vienna, AUSTRIA
- Medical Faculty, Sigmund Freud University, Vienna, AUSTRIA
| | - Erhan Bayram
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Göknur Haliloğlu
- Hacettepe University, School of Medicine, Department of Pediatrics, Division of Child Neurology, Ankara, TURKEY
| | - Ayşe İpek Polat
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Müge Ayanoğlu
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Derya Okur
- Dokuz Eylül University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Ayşe Fahriye Tosun
- Adnan Menderes University, School of Medicine, Department of Pediatrics, Division of Child Neurology, Aydın, TURKEY
| | - Gül Serdaroğlu
- Ege University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Sanem Yilmaz
- Ege University, School of Medicine, Department of Pediatrics, Division of Child Neurology, İzmir, TURKEY
| | - Haluk Topaloğlu
- Hacettepe University, School of Medicine, Department of Pediatrics, Division of Child Neurology, Ankara, TURKEY
| | - Banu Anlar
- Hacettepe University, School of Medicine, Department of Pediatrics, Division of Child Neurology, Ankara, TURKEY
| | - Sebahattin Cirak
- Cologne University, Department of Pediatrics, Center for Molecular Medicine Cologne, Cologne, GERMANY
| | - Andrew G. Engel
- Mayo Clinic, Rochester, Department of Neurology, MN 55905, USA
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