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Belot A, Ndiaye A, Luque-Fernandez MA, Kipourou DK, Maringe C, Rubio FJ, Rachet B. Summarizing and communicating on survival data according to the audience: a tutorial on different measures illustrated with population-based cancer registry data. Clin Epidemiol 2019; 11:53-65. [PMID: 30655705 PMCID: PMC6322561 DOI: 10.2147/clep.s173523] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022] Open
Abstract
Survival data analysis results are usually communicated through the overall survival probability. Alternative measures provide additional insights and may help in communicating the results to a wider audience. We describe these alternative measures in two data settings, the overall survival setting and the relative survival setting, the latter corresponding to the particular competing risk setting in which the cause of death is unavailable or unreliable. In the overall survival setting, we describe the overall survival probability, the conditional survival probability and the restricted mean survival time (restricted to a prespecified time window). In the relative survival setting, we describe the net survival probability, the conditional net survival probability, the restricted mean net survival time, the crude probability of death due to each cause and the number of life years lost due to each cause over a prespecified time window. These measures describe survival data either on a probability scale or on a timescale. The clinical or population health purpose of each measure is detailed, and their advantages and drawbacks are discussed. We then illustrate their use analyzing England population-based registry data of men 15-80 years old diagnosed with colon cancer in 2001-2003, aiming to describe the deprivation disparities in survival. We believe that both the provision of a detailed example of the interpretation of each measure and the software implementation will help in generalizing their use.
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Affiliation(s)
- Aurélien Belot
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Aminata Ndiaye
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Miguel-Angel Luque-Fernandez
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Dimitra-Kleio Kipourou
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Camille Maringe
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Francisco Javier Rubio
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
| | - Bernard Rachet
- Cancer Survival Group, Department of Non-Communicable DiseaseEpidemiology, Faculty of Epidemiology and Population Health, London School of Hygiene and Tropical Medicine, London, UK,
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Gillaizeau F, Dantan E, Giral M, Foucher Y. A multistate additive relative survival semi-Markov model. Stat Methods Med Res 2015; 26:1700-1711. [DOI: 10.1177/0962280215586456] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
Abstract
Medical researchers are often interested to investigate the relationship between explicative variables and times-to-events such as disease progression or death. Such multiple times-to-events can be studied using multistate models. For chronic diseases, it may be relevant to consider semi-Markov multistate models because the transition intensities between two clinical states more likely depend on the time already spent in the current state than on the chronological time. When the cause of death for a patient is unavailable or not totally attributable to the disease, it is not possible to specifically study the associations with the excess mortality related to the disease. Relative survival analysis allows an estimate of the net survival in the hypothetical situation where the disease would be the only possible cause of death. In this paper, we propose a semi-Markov additive relative survival (SMRS) model that combines the multistate and the relative survival approaches. The usefulness of the SMRS model is illustrated by two applications with data from a French cohort of kidney transplant recipients. Using simulated data, we also highlight the effectiveness of the SMRS model: the results tend to those obtained if the different causes of death are known.
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Affiliation(s)
- Florence Gillaizeau
- EA 4275 – SPHERE – bioStatistics, Pharmacoepidemiology and Human sciEnces REsearch team, Université de Nantes, Nantes, France
- INSERM CR1064 Centre pour la Recherche en Transplantation et Immunointervention (CRTI), Institut Transplantation-Urologie-Néphrologie (ITUN), Nantes, France
- Centre Hospitalier Universitaire de Nantes, Nantes, France
| | - Etienne Dantan
- EA 4275 – SPHERE – bioStatistics, Pharmacoepidemiology and Human sciEnces REsearch team, Université de Nantes, Nantes, France
| | - Magali Giral
- EA 4275 – SPHERE – bioStatistics, Pharmacoepidemiology and Human sciEnces REsearch team, Université de Nantes, Nantes, France
- INSERM CR1064 Centre pour la Recherche en Transplantation et Immunointervention (CRTI), Institut Transplantation-Urologie-Néphrologie (ITUN), Nantes, France
- Centre Hospitalier Universitaire de Nantes, Nantes, France
| | - Yohann Foucher
- EA 4275 – SPHERE – bioStatistics, Pharmacoepidemiology and Human sciEnces REsearch team, Université de Nantes, Nantes, France
- INSERM CR1064 Centre pour la Recherche en Transplantation et Immunointervention (CRTI), Institut Transplantation-Urologie-Néphrologie (ITUN), Nantes, France
- Centre Hospitalier Universitaire de Nantes, Nantes, France
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Lorent M, Giral M, Foucher Y. Net time-dependent ROC curves: a solution for evaluating the accuracy of a marker to predict disease-related mortality. Stat Med 2014; 33:2379-89. [DOI: 10.1002/sim.6079] [Citation(s) in RCA: 39] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2013] [Revised: 10/15/2013] [Accepted: 12/05/2013] [Indexed: 01/27/2023]
Affiliation(s)
- Marine Lorent
- SPHERE EA 4275 Biostatistics, Clinical Research and Subjective Measurements in Health Sciences; University of Nantes; 1 rue Gaston Veil 44035 Nantes France
| | - Magali Giral
- Transplantation, Urology and Nephrology Institute (ITUN); Nantes Hospital and University; Inserm U1064, 30 Bd. Jean Monnet 44093 Nantes France
| | - Yohann Foucher
- SPHERE EA 4275 Biostatistics, Clinical Research and Subjective Measurements in Health Sciences; University of Nantes; 1 rue Gaston Veil 44035 Nantes France
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