A sensitive method for rapid detection of alkyl halides and dehalogenase activity using a multistep enzyme assay

Isolation and Characterization of a Novel Bacterium from the Marine Environment for Trichloroacetic Acid Bioremediation

Halogenated compounds are an important class of environmental pollutants that are widely used in industrial chemicals such as solvents, herbicides, and pesticides. Many studies have been carried out to explore the biodegradation of these chemicals. Trichloroacetic acid (TCA) is one of the main halogenated compounds that are carcinogenic to humans and animals. The bacterium was isolated from the northern coastline of Johor Strait. In this study, the ability of strain MH2 to biodegrade TCA was evaluated by a growth experiment and dehalogenase enzyme assay. The growth profile of the isolated strain was examined. The doubling time for L. boronitolerans MH2 was found to be 32 h. The release of chloride ion in the degradation process was measured at 0.33 × 10−3 ± 0.03 mol∙L−1 after 96 h when the growth curve had reached its maximum within the late bacterial exponential phase. The results showed that the strain had a promising ability to degrade TCA by producing dehalogenase enzyme when cell-free extracts were prepared from growth on TCA as the sole carbon source with enzyme-specific activity, 1.1 ± 0.05 µmolCl−min−1∙mg−1 protein. Furthermore, the morphological, and biochemical aspects of the isolated bacterium were studied to identify and characterize the strain. The morphological observation of the isolated bacterium was seen to be a rod-shaped, Gram-positive, motile, heterotrophic, and spore-forming bacterium. The amplification of the 16S rRNA and gene analysis results indicated that the isolated bacterium had 98% similarity to Lysinibacillus boronitolerans. The morphological and biochemical tests supported the 16S rRNA gene amplification. To the best of the authors’ knowledge, this is the first reported case of this genus of bacteria to degrade this type of halogenated compound.

Biosynthesis of TiO2 and ZnO nanoparticles by Halomonas elongata IBRC-M 10214 in different conditions of medium

Introduction: In the recent years, green synthesis is a novel method without some disadvantages of physical and chemical methods. In this approach, bacteria, archaebacteria, fungi, and plants may be applied without utilizing toxic and expensive materials for metal nanoparticles (MNPs) preparation. Methods: In this study, we used Taguchi method to obtain optimum conditions in titanium dioxide and zinc oxide nanoparticle (NPs) biosynthesis by Halomonas elongata IBRC-M 10214. Design and analysis of Taguchi experiments (an orthogonal assay and analysis of variance [ANOVA]) carried out by the Qualitek-4 software. Effects of TiO(OH)2, incubation temperature, and culturing time for synthesis of TiO2 NPs as well as ZnCl2 concentration, glucose concentration, and incubation temperature for the preparation of ZnO NPs were evaluated as the controllable factors with 3 levels. Characterization of TiO2 and ZnO NPs were determined by UV-Vis spectroscopy, X-ray diffraction (XRD), Fourier transform infrared spectroscopy (FT-IR), scanning electron microscopy (SEM), and dynamic light scattering (DLS) analysis. Also, the antimicrobial properties of these NPs were investigated based on agar diffusion assay of NPs dispersed in batch cultures using Escherichia coli ATCC 25922 and Staphylococcus aureus ATCC 43300 as multidrug-resistant (MDR) bacteria. Results: It was evaluated that TiO2 and ZnO NPs had respectively average diameter sizes of 104.63±27.75 and 18.11±8.93 nm with spherical shapes. In contrast to the TiO2 NPs without antibacterial activity, the ZnO NPs had antibacterial effects at 0.1 and 0.01 M of (ZnCl2). Conclusion: The ZnO NPs have the antibacterial effect that can be operative in the medicinal aspect for fighting against prominent MDR bacteria such as E. coli ATCC 25922 and S. aureus ATCC 43300. In total, this study presents a simple method in the biosynthesis of TiO2 and ZnO NPs with low the expense, eco-friendly, and high productivity properties.