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Derdare M, Boudjahem AG, Cheghib N. Stability and electronic properties of V-doped ruthenium nanoclusters and their adsorptive properties towards hydrogen sulphide and serine molecules. Mol Phys 2022. [DOI: 10.1080/00268976.2022.2070088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Meryem Derdare
- Computational Catalysis Group, Laboratory of Applied Chemistry, University of Guelma, Guelma, Algeria
| | - Abdel-Ghani Boudjahem
- Computational Catalysis Group, Laboratory of Applied Chemistry, University of Guelma, Guelma, Algeria
| | - Nedjoua Cheghib
- Computational Catalysis Group, Laboratory of Applied Chemistry, University of Guelma, Guelma, Algeria
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2
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Lan NT, Mai NT, La DD, Tam NM, Ngo ST, Cuong NT, Dang NV, Phung TT, Tung NT. DFT investigation of Au9M2+ nanoclusters (M = Sc-Ni): The magnetic superatomic behavior of Au9Cr2+. Chem Phys Lett 2022. [DOI: 10.1016/j.cplett.2022.139451] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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3
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Minamikawa K, Sarugaku S, Arakawa M, Terasaki A. Electron counting in cationic and anionic silver clusters doped with a 3d transition-metal atom: endo- vs. exohedral geometry. Phys Chem Chem Phys 2022; 24:1447-1455. [DOI: 10.1039/d1cp04197e] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Cationic and anionic AgNM+/− (M = Sc–Ni) clusters are explored to examine the electron-counting rule. Among 18-valence-electron clusters, endohedrally doped ones are stable due to superatomic electron-shell closure involving delocalized 3d electrons.
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Affiliation(s)
- Kento Minamikawa
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Shun Sarugaku
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Masashi Arakawa
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
| | - Akira Terasaki
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan
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4
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Arakawa M, Horioka M, Minamikawa K, Kawano T, Terasaki A. Reaction of nitric oxide molecules on transition-metal-doped silver cluster cations: size- and dopant-dependent reaction pathways. Phys Chem Chem Phys 2021; 23:22947-22956. [PMID: 34622905 DOI: 10.1039/d1cp02882k] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
We report size- and dopant-dependent reaction pathways as well as reactivity of gas-phase free AgnM+ (M = Sc-Ni) clusters interacting with NO. The reactivity of AgnM+, except for M = Cr and Mn, exhibits a minimum at a specific size, where the cluster cation possesses 18 or 20 valence electrons consisting of Ag 5s and dopant's 3d and 4s. The product ions range from NO adducts, AgnM(NO)m+, and oxygen adducts, AgnMOm+, to NO2 adducts, AgnM(NO2)m+. At small sizes, AgnMOm+ are the major products for M = Sc-V, whereas AgnM(NO)m+ dominate the products for M = Cr-Ni in striking contrast. In both cases, these reaction products are reminiscent of those from an atomic transition metal. However, the reaction pathways are different at least for M = Sc and Ti; kinetics measurements reveal that the present oxygen adducts are formed via NO adducts, while, for example, Ti+ is known to produce TiO+ directly by reaction with a single NO molecule. At larger sizes, on the other hand, AgnM(NO2)m+ are dominantly produced regardless of the dopant element because the dopant atom is encapsulated by the Ag host; the NO2 formation on the cluster is similar to that reported for undoped Agn+.
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Affiliation(s)
- Masashi Arakawa
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Masataka Horioka
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Kento Minamikawa
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Tomoki Kawano
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
| | - Akira Terasaki
- Department of Chemistry, Faculty of Science, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan.
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Mai NT, Lan NT, Cuong NT, Tam NM, Ngo ST, Phung TT, Dang NV, Tung NT. Systematic Investigation of the Structure, Stability, and Spin Magnetic Moment of CrM n Clusters (M = Cu, Ag, Au, and n = 2-20) by DFT Calculations. ACS OMEGA 2021; 6:20341-20350. [PMID: 34395982 PMCID: PMC8358970 DOI: 10.1021/acsomega.1c02282] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/30/2021] [Accepted: 07/15/2021] [Indexed: 06/13/2023]
Abstract
Binary clusters of transition-metal and noble-metal elements have been gathering momentum for not only advanced fundamental understanding but also potential as elementary blocks of novel nanostructured materials. In this regard, the geometries, electronic structures, stability, and magnetic properties of Cr-doped Cu n , Ag n , and Au n clusters (n = 2-20) have been systematically studied by means of density functional theory calculations. It is found that the structural evolutions of CrCu n and CrAg n clusters are identical. The icosahedral CrCu12 and CrAg12 are crucial sizes for doped copper and silver species. Small CrAu n clusters prefer the planar geometries, while the larger ones appear as on the way to establish the tetrahedral CrAu19. Our results show that while each noble atom contributes one s valence electron to the cluster shell, the number of chromium delocalized electrons is strongly size-dependent. The localization and delocalization behavior of 3d orbitals of the chromium decide how they participate in metallic bonding, stabilize the cluster, and give rise to and eventually quench the spin magnetic moment. Moreover, molecular orbital analysis in combination with a qualitative interpretation using the phenomenological shell model is applied to reveal the complex interplay between geometric structure, electronic structure, and magnetic moment of clusters. The finding results are expected to provide greater insight into how a host material electronic structure influences the geometry, stability, and formation of spin magnetic moments in doped systems.
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Affiliation(s)
- Nguyen Thi Mai
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
| | - Ngo Thi Lan
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
- Department
of Physics and Technology, Thai Nguyen University
of Science, Thai Nguyen 250000, Vietnam
| | - Ngo Tuan Cuong
- Center
for Computational Science, Hanoi National
University of Education, Hanoi 11310, Vietnam
| | - Nguyen Minh Tam
- Computational
Chemistry Research Group, Ton Duc Thang
University, Ho Chi
Minh City 72915, Vietnam
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 72915, Vietnam
| | - Son Tung Ngo
- Faculty
of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City 72915, Vietnam
- Laboratory
of Theoretical and Computational Biophysics, Ton Duc Thang University, Ho Chi
Minh City 72915, Vietnam
| | - Thu Thi Phung
- University
of Science and Technology of Hanoi, Vietnam
Academy of Science and Technology, Hanoi 11307, Vietnam
| | - Nguyen Van Dang
- Department
of Physics and Technology, Thai Nguyen University
of Science, Thai Nguyen 250000, Vietnam
| | - Nguyen Thanh Tung
- Institute
of Materials Science and Graduate University of Science and Technology, Vietnam Academy of Science and Technology, Hanoi 11307, Vietnam
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Cuong NT, Mai NT, Tung NT, Lan NT, Duong LV, Nguyen MT, Tam NM. The binary aluminum scandium clusters Al xSc y with x + y = 13: when is the icosahedron retained? RSC Adv 2021; 11:40072-40084. [PMID: 35494155 PMCID: PMC9044545 DOI: 10.1039/d1ra06994b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2021] [Revised: 12/24/2021] [Accepted: 12/07/2021] [Indexed: 11/27/2022] Open
Abstract
Geometrical and electronic structures of the 13-atom clusters AlxScy with x + y = 13, as well as their thermodynamic stabilities were investigated using DFT calculations. Both anionic and neutral isomers of AlxScy were found to retain an icosahedral shape of both Al13 and Sc13 systems in which an Al atom occupies the endohedral central position of the icosahedral cage, irrespective of the number of Al atoms present. Such a phenomenon occurs to maximize the number of stronger Al–Al and Sc–Al bonds instead of the weaker Sc–Sc bonds. NBO analyses were applied to examine their electron configurations and rationalize the large number of open shells and thereby high multiplicities of the mixed clusters having more than three Sc atoms. The SOMOs are the molecular orbitals belonged to the irreducible representations of the symmetry point group of the clusters studied, rather than to the cluster electron shells. Evaluation of the average binding energies showed that the thermodynamic stability of AlxScy clusters is insignificantly altered as the number y goes from 0 to 7 and then steadily decreases when y attains the 7–13 range. Increase of the Sc atom number also reduces the electron affinities of the binary AlxScy clusters, and thus they gradually lose the superhalogen characteristics with respect to the pure Al13. The icosahedral structure of the AlxScy clusters with x + y = 13.![]()
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Affiliation(s)
- Ngo Tuan Cuong
- Faculty of Chemistry, Center for Computational Science, Hanoi National University of Education, Hanoi, Vietnam
| | - Nguyen Thi Mai
- Institute of Materials Science, Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc, Hanoi Vietnam
| | - Nguyen Thanh Tung
- Institute of Materials Science, Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc, Hanoi Vietnam
| | - Ngo Thi Lan
- Institute of Materials Science, Graduate University of Science and Technology, Vietnam Academy of Science and Technology, 18 Hoang Quoc, Hanoi Vietnam
- Department of Physics and Technology, Thai Nguyen University of Science, Thai Nguyen, Vietnam
| | - Long Van Duong
- Institute for Computational Science and Technology (ICST), Quang Trung Software City, Ho Chi Minh City, Vietnam
| | - Minh Tho Nguyen
- Department of Chemistry, KU Leuven, Celestijnenlaan 200F, B-3001 Leuven, Belgium
| | - Nguyen Minh Tam
- Computational Chemistry Research Group, Ton Duc Thang University, Ho Chi Minh City, Vietnam
- Faculty of Applied Sciences, Ton Duc Thang University, Ho Chi Minh City, Vietnam
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Jabed MA, Dandu N, Tretiak S, Kilina S. Passivating Nucleobases Bring Charge Transfer Character to Optically Active Transitions in Small Silver Nanoclusters. J Phys Chem A 2020; 124:8931-8942. [PMID: 33079551 DOI: 10.1021/acs.jpca.0c06974] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Abstract
DNA-wrapped silver nanoclusters (DNA-AgNCs) are known for their efficient luminescence. However, their emission is highly sensitive to the DNA sequence, the cluster size, and its charge state. To get better insights into photophysics of these hybrid systems, simulations based on density functional theory (DFT) are performed. Our calculations elucidate the effect of the structural conformations, charges, solvent polarity, and passivating bases on optical spectra of DNA-AgNCs containing five and six Ag atoms. It is found that inclusion of water in calculations as a polar solvent media results in stabilization of nonplanar conformations of base-passivated clusters, while their planar conformations are more stable in vacuum, similar to the bare Ag5 and Ag6 clusters. Cytosines and guanines interact with the cluster twice stronger than thymines, due to their larger dipole moments. In addition to the base-cluster interactions, hydrogen bonds between bases notably contribute to the structure stabilization. While the relative intensity, line width, and the energy of absorption peaks are slightly changing depending on the cluster charge, conformations, and base types, the overall spectral shape with five well-resolved bands at 2.5-5.5 eV is consistent for all structures. Independent of the passivating bases and the cluster size and charge, the low energy optical transitions at 2.5-3.5 eV exhibit a metal to ligand charge transfer (MLCT) character with the main contribution emerging from Ag-core to the bases. Cytosines facilitate the MLCT character to a larger degree comparing to the other bases. However, the doublet transitions in clusters with the open shell electronic structure (Ag5 and Ag6+) result in appearance of additional red-shifted (<2.5 eV) and optically weak band with negligible MLCT character. The passivated clusters with the closed shell electronic structure (Ag5+ and Ag6) exhibit higher optical intensity of their lowest transitions with much higher MLCT contribution, thus having better potential for emission, than their open shell counterparts.
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Affiliation(s)
- Mohammed A Jabed
- Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58108, United States
| | - Naveen Dandu
- Argonne National Laboratory, Lemont, Illinois 60439, United States
| | - Sergei Tretiak
- Center for Nonlinear Studies, Center for Integrated Nanotechnologies, and Theoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico 87545, United States
| | - Svetlana Kilina
- Department of Chemistry and Biochemistry, North Dakota State University, Fargo, North Dakota 58108, United States
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Affiliation(s)
- Jijun Zhao
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Qiuying Du
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Si Zhou
- Key Laboratory of Materials Modification by Laser, Ion and Electron Beams (Dalian University of Technology), Ministry of Education, Dalian 116024, China
| | - Vijay Kumar
- Center for Informatics, School of Natural Sciences, Shiv Nadar University, NH-91, Tehsil Dadri, Gautam Buddha Nagar 201314, U. P., India
- Dr. Vijay Kumar Foundation, 1969 Sector 4, Gurgaon 122001, Haryana, India
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Minamikawa K, Arakawa M, Tono K, Terasaki A. A revisit to electronic structures of cobalt-doped silver cluster anions by size-dependent reactivity measurement. Chem Phys Lett 2020. [DOI: 10.1016/j.cplett.2020.137613] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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10
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Stability and electronic properties of IrnV (n = 2–10) nanoclusters and their reactivity toward N2H4 molecule. Struct Chem 2019. [DOI: 10.1007/s11224-019-01391-0] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
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