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Shepherdson EMF, Elliot MA. Redefining development in Streptomyces venezuelae: integrating exploration into the classical sporulating life cycle. mBio 2024; 15:e0242423. [PMID: 38470267 PMCID: PMC11005364 DOI: 10.1128/mbio.02424-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Accepted: 02/23/2024] [Indexed: 03/13/2024] Open
Abstract
Two growth modes have been described for the filamentous Streptomyces bacteria. Their classic developmental life cycle culminates in the formation of dormant spores, where movement to new environments is mediated through spore dispersal. In contrast, exploratory growth proceeds as a rapidly expanding vegetative mycelium that leads to extensive surface colonization and is associated with the release of volatile compounds that promote alkalinization (and reduced iron bioavailability) of its surrounding environment. Here, we report that exploratory growth in Streptomyces venezuelae can proceed in tandem with classic sporulating development in response to specific nutritional cues. Sporulating exploration is not accompanied by a rise in environmental pH but has the same iron acquisition requirements as conventional exploration. We found that mutants that were defective in their ability to sporulate were unaffected in exploration, but mutants undergoing precocious sporulation were compromised in their exploratory growth and this appeared to be mediated through premature activation of the developmental regulator WhiI. Cell envelope integrity was also found to be critical for exploration, as mutations in the cell envelope stress-responsive extracytoplasmic function sigma factor SigE led to a failure to explore robustly under all exploration-promoting conditions. Finally, in expanding the known exploration-promoting conditions, we discovered that the model species Streptomyces lividans exhibited exploration capabilities, supporting the proposal that exploration is conserved across diverse streptomycetes. IMPORTANCE Streptomyces bacteria have evolved diverse developmental and metabolic strategies to thrive in dynamic environmental niches. Here, we report the amalgamation of previously disparate developmental pathways, showing that colony expansion via exploration can proceed in tandem with colony sporulation. This developmental integration extends beyond phenotype to include shared genetic elements, with sporulation-specific repressors being required for successful exploration. Comparing this new exploration mode with previously identified strategies has revealed key differences (e.g., no need for environmental alkalinization), and simultaneously allowed us to define unifying requirements for Streptomyces exploration. The "reproductive exploration" phenomenon reported here represents a unique bet-hedging strategy, with the Streptomyces colony engaging in an aggressive colonization strategy while transporting a protected genetic repository.
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Affiliation(s)
- Evan M. F. Shepherdson
- Department of Biochemistry and Biomedical Sciences, McMaster University, Hamilton, Ontario, Canada
- Institute for Infectious Disease Research, McMaster University, Hamilton, Ontario, Canada
| | - Marie A. Elliot
- Institute for Infectious Disease Research, McMaster University, Hamilton, Ontario, Canada
- Department of Biology, McMaster University, Hamilton, Ontario, Canada
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2
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Wu S, Luo Y, Zeng Z, Yu Y, Zhang S, Hu Y, Chen L. Determination of internal controls for quantitative gene expression of Spodoptera litura under microbial pesticide stress. Sci Rep 2024; 14:6143. [PMID: 38480844 PMCID: PMC10937984 DOI: 10.1038/s41598-024-56724-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2023] [Accepted: 03/10/2024] [Indexed: 03/17/2024] Open
Abstract
Quantitative real-time polymerase chain reaction (qRT-PCR) has become a commonly used method for the quantification of gene expression. However, accurate qRT-PCR analysis requires a valid internal reference for data normalization. To determine the valid reference characterized with low expression variability among Spodoptera litura samples after microbial pesticide treatments, nine housekeeping genes, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), arginine kinase, ubiquitin C, actin-5C (ACT5C), actin, ribosomal protein S13 (RPS13), tubulin, acidic ribosomal protein P0 (RPLP0) and ubiquinol-cytochrome c reductase, were evaluated for their suitability using geNorm, Normfinder, BestKeeper, RefFinder and the comparative delta CT methods in this study. S. litura larvae after direct treatment (larvae were immersed in biopesticides), indirect treatment (larvae were fed with biopesticide immersed artificial diets) and comprehensive treatment (larvae were treated with the first two treatments in sequence), respectively with Metarhizium anisopliae, Empedobacter brevis and Bacillus thuringiensis, were investigated. The results indicated that the best sets of internal references were as follows: RPLP0 and ACT5C for direct treatment conditions; RPLP0 and RPS13 for indirect treatment conditions; RPS13 and GAPDH for comprehensive treatment conditions; RPS13 and RPLP0 for all the samples. These results provide valuable bases for further genetic researches in S. litura.
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Affiliation(s)
- Shuang Wu
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Yunmi Luo
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Zhihong Zeng
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Ying Yu
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Shicai Zhang
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Yan Hu
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China
| | - Lei Chen
- Institute of Vegetable and Flower Research, Chongqing Academy of Agricultural Sciences, Chongqing, 401329, China.
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Devi S, Diksha, Verma J, Sohal SK, Manhas RK. Insecticidal potential of endophytic Streptomyces sp. against Zeugodacus cucurbitae (Coquillett) (Diptera: Tephritidae) and biosafety evaluation. Toxicon 2023; 233:107246. [PMID: 37586611 DOI: 10.1016/j.toxicon.2023.107246] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2023] [Revised: 08/03/2023] [Accepted: 08/04/2023] [Indexed: 08/18/2023]
Abstract
Fruit flies of Tephritidae family pose a serious threat to cultivation of fruits and vegetables across the world. Among them, melon fruit fly, Zeugodacus cucurbitae (Coquillett) (Diptera: Tephritidae) is a devastating pest of plants from Cucurbitaceae family. In a rising concern about the harmful effects associated with the use of chemical insecticides and development of resistance in pest insects, safer pest management strategies such as, use of biopesticides of microbial origin are being contemplated. Therefore, the present study aimed to evaluate the insecticidal potential of Streptomyces sp. SP5 protein extract against Z. cucurbitae. MTT assay, Ames mutagenicity, DNA nicking, and comet assay were conducted to determine the biosafety of protein extract. Second instar larvae of Z. cucurbitae were treated with various concentrations (1, 100, 200, 300, 400, and 500 μg/ml) of Streptomyces sp. SP5 protein extract. The protein extract showed significant larvicidal effects with LC50 value of 308.92 μg/ml. The percentage of adults emerged declined with increase in concentration. There was significant prolongation in developmental durations of the larvae. Various morphological aberrations in the form of deformed adults and pupae and decline in pupal weight were also observed. The nutritional physiology of the treated larvae was also adversely affected. The results from biosafety evaluation revealed antimutagenic and non-toxic nature of Streptomyces sp. proteins. This study indicates that Streptomyces sp. SP5 has the potential to be used as an ecologically safe biocontrol agent against Z. cucurbitae.
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Affiliation(s)
- Sapna Devi
- Department of Microbiology, Guru Nanak Dev University, Amritsar, Punjab, 143005, India.
| | - Diksha
- Department of Zoology, Guru Nanak Dev University, Amritsar, Punjab, 143005, India.
| | - Jaya Verma
- Department of Microbiology, Guru Nanak Dev University, Amritsar, Punjab, 143005, India.
| | - Satwinder Kaur Sohal
- Department of Zoology, Guru Nanak Dev University, Amritsar, Punjab, 143005, India.
| | - Rajesh Kumari Manhas
- Department of Microbiology, Guru Nanak Dev University, Amritsar, Punjab, 143005, India.
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Irsad, Shahid M, Haq E, Mohamed A, Rizvi PQ, Kolanthasamy E. Entomopathogen-based biopesticides: insights into unraveling their potential in insect pest management. Front Microbiol 2023; 14:1208237. [PMID: 37564286 PMCID: PMC10411202 DOI: 10.3389/fmicb.2023.1208237] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2023] [Accepted: 06/09/2023] [Indexed: 08/12/2023] Open
Abstract
Global food security is a critical challenge to fulfill the demands of an exponentially growing population. To date, growers rely on chemicals; the broad-spectrum application of synthetic molecules leads to environmental contamination, resistance development, residual toxicity, pest resurgence, and a detrimental effect on human health and cattle. Crop production needs to be improved considering environmental and human health concerns to ensure food security. Furthermore, economically important crops are prone to attack by insect pests, causing considerable yield losses. Microbes are an eco-friendly, versatile alternative, and a potential candidate for combatting destructive pests below the economic injury level and improving the plant's health and productivity. Several microbial pathogens, including parasites, predators, parasitoids, pollinators, and many beneficial microorganisms, possess toxic properties against target organisms but do not cause harm to the non-target organisms. Entomopathogens (ENMs) have great potential for pest suppression due to their remarkable properties. Bacteria are host-specific, but fungi have a broader host range and can be significantly affected by both soil-dwelling and terrestrial insect pests. Virulent pathogens cause mortality in target insect pests known as ENMs and can penetrate through natural openings, ingestions, and integuments to cause a possible effect on target insect pests. The objective of using ENMs is to sustain productivity, improve environmental health, reduce pesticides, and conserve natural resources. Moreover, research is ongoing to discover other possible aspects, especially exploring potential ENMs. Therefore, there is a need for identification, isolation, and bioformulation to overcome the existing issues. This study is mainly focused on the status of bio-formulations, pathogenicity, their mode of action, and the potential application of different types of microbial formulations for sustainable pest management.
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Affiliation(s)
- Irsad
- Department of Plant Protection, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India
| | - Mohammad Shahid
- Plant-Microbe Interaction and Rhizosphere Biology, ICAR-NBAIM, Kushmaur, India
| | - Ejazul Haq
- Department of Plant Protection, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India
| | | | - Parvez Qamar Rizvi
- Department of Plant Protection, Faculty of Agricultural Sciences, Aligarh Muslim University, Aligarh, India
| | - Elango Kolanthasamy
- Kumaraguru Institute of Agriculture, Tamil Nadu Agricultural University (TNAU), Coimbatore, India
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Raguvaran K, Kalpana M, Manimegalai T, Maheswaran R. Bioefficacy of isolated compound l-isoleucine, N-allyloxycarbonyl-, and dodecyl ester from entomopathogenic actinobacteria Actinokineospora fastidiosa against agricultural insect pests, human vector mosquitoes, and antioxidant activities. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:42608-42628. [PMID: 36260230 DOI: 10.1007/s11356-022-23565-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/24/2021] [Accepted: 10/07/2022] [Indexed: 06/16/2023]
Abstract
Spodoptera litura and Helicoverpa armigera are polyphagous pests of agricultural crops in the Asian tropics since these pests have been responsible for massive crop and carry economic losses and low commodity production. At the same time, mosquitoes are vectors for numerous dreadful diseases, which is the most important group of insect for their public health concern. Using synthetic insecticides to control the pests can lead to contamination of land surface and groundwater and impact beneficial soil organisms and nontarget species. Applications of bioactive compounds are received considerable attention across the world as alternatives to synthetic insecticides. In the current study, actinobacterial secondary metabolite was isolated from Actinokineospora fastidiosa for the first time. The effect of actinobacterial metabolite (l-isoleucine, N-allyloxycarbonyl-, and dodecyl ester) was assessed on agricultural pest S. litura and H. armigera, mosquito vectors larvae Ae. aegypti, An. stephensi, and Cx. quinquefasciatus. The bioactive fraction was characterized through UV, FTIR, and NMR analysis. GC-MS analyses reveal the existence of a bioactive compound with a respective retention time of 19.740 responsible for larvicidal activity. The bioefficacy of the l-isoleucine, N-allyloxycarbonyl-, and dodecyl ester showed high antifeedant activity on S. litura (80.80%) and H. armigera (84.49%); and larvicidal activity on S. litura (82.77%) and H. armigera (88.00%) at 25 μg/mL concentration, respectively. The effective LC50 values were 8.07 μg/mL (F = 2.487, r2 = 0.988, P ≤ 0.05) on S. litura and 7.53 μg/mL (F = 123.25, r2 = 0.951, P ≤ 0.05) on H. armigera. The mosquito larvicidal effect of isolated compounds l-isoleucine, N-allyloxycarbonyl-, and dodecyl ester treated against Ae. aegypti, An. stephensi, and Cx. quinquefasciatus the obtained percentage mortality was 96.66, 83.24, 64.52, 50.00, and 40.00% against Ae. aegypti; 100.00, 86.22, 73.81, 65.37, and 56.24% against An. stephensi; 100.00, 90.00, 76.24, 68.75, and 56.23% against Cx. quinquefasciatus. The mosquito larvae of Ae. aegypti obtained LC50 value was 13.25 μg/mL, F = 28.50, r2 = 0.90; on An. stephensi was 10.19 μg/mL, F = 15.55, r2 = 0.83, and Cx. quinquefasciatus was 9.68 μg/mL, F = 20.00, r2 = 0.87. Furthermore, l-isoleucine-, N-allyloxycarbonyl-, and dodecyl ester-treated larvae produced significant pupicidal activity on S. litura (62.71%) and H. armigera (66.50%) at 25 μg/mL, along with increased larval and pupal duration as compared to control group. Treated larvae revealed obliteration in the midgut epithelial cells and destruction of microvilli was noticed as compared to the control. The isolated compounds l-isoleucine, N-allyloxycarbonyl-, and dodecyl ester did not produce any significant mortality on zebrafish embryos in all tested concentrations on biosafety observation. The potential microbial isolated molecule may fit well in IPM programs. Since the risk to human health, the environment, etc. is unknown.
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Affiliation(s)
- Krishnan Raguvaran
- Entomology Laboratory, Department of Zoology, Periyar University, Salem, 636 011, Tamil Nadu, India
| | - Manickam Kalpana
- Entomology Laboratory, Department of Zoology, Periyar University, Salem, 636 011, Tamil Nadu, India
| | - Thulasiraman Manimegalai
- Entomology Laboratory, Department of Zoology, Periyar University, Salem, 636 011, Tamil Nadu, India
| | - Rajan Maheswaran
- Entomology Laboratory, Department of Zoology, Periyar University, Salem, 636 011, Tamil Nadu, India.
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Siddharthan N, Balagurunathan R, Venkatesan S, Hemalatha N. Bio-efficacy of Geobacillus thermodenitrificans PS41 against larvicidal, fungicidal, and plant growth-promoting activities. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:42596-42607. [PMID: 35670947 DOI: 10.1007/s11356-022-20455-z] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 04/21/2022] [Indexed: 06/15/2023]
Abstract
The microbial interactions with plant hosts were known to establish plant growth and beneficial productivity. Some bacteria, fungi, actinomycetes, yeast, and algae have proven as potential effective microbes in agricultural field. In this study, the insecticidal effect of Geobacillus thermodenitrificans PS41 secondary metabolites was tested against third instar larvae of Spodoptera litura, with mortality rate 60.26 ± 1.5% which might influence the agropest management. The test bacterial metabolites were subjected to GC-MS analysis. Totally, 17 different compounds were identified from the ethyl acetate extract metabolites of PS41 strain. The highest peak was obtained with behenic alcohol compound followed by 1-octadecene and penta erythrityl tetrachloride. The Geobacillus thermodenitrificans PS41 secondary metabolites showed potential antifungal activity against plant pathogenic fungi. The highest inhibit was attained against Cladosporium sp., (25 mm) followed by Rhizoctonia solani and Alternaria brassicola (23 mm). However, no toxic effect was exerted upon earthworm (Perionyx excavatus) when treated with PS41 bacterial metabolites. The potential PS41 strain was also found supporting the plant growth. The potential bacterial strain PS41 did not show antagonistic activity against soil bacteria such as Rhizobium sp., Azotobacter sp., Azospirullum brasilense, Pseudomonas fluorescens and Bacillus megaterium. The potential test organism, Geobacillus thermodenitrificans PS41, possessing biopesticide and biofertilizer properties can be a suitable ecofriendly organic applicant in agricultural field for enhancing crop production.
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Affiliation(s)
- Nagarajan Siddharthan
- Department of Microbiology, Periyar University, Periyar Palkalai Nagar, Salem, Tamil Nadu, 11, India
| | - Ramasamy Balagurunathan
- Department of Microbiology, Periyar University, Periyar Palkalai Nagar, Salem, Tamil Nadu, 11, India
| | - Srinivasan Venkatesan
- Department of Environmental Science, Periyar University, Periyar Palkalai Nagar, Salem, Tamil Nadu, 11, India
| | - Natarajan Hemalatha
- Department of Microbiology, Periyar University, Periyar Palkalai Nagar, Salem, Tamil Nadu, 11, India.
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Insecticidal activities of Streptomyces sp. KSF103 ethyl acetate extract against medically important mosquitoes and non-target organisms. Sci Rep 2023; 13:4. [PMID: 36593229 PMCID: PMC9807562 DOI: 10.1038/s41598-022-25387-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2022] [Accepted: 11/29/2022] [Indexed: 01/03/2023] Open
Abstract
A potentially novel actinobacterium isolated from forest soil, Streptomyces sp. KSF103 was evaluated for its insecticidal effect against several mosquito species namely Aedes aegypti, Aedes albopictus, Anopheles cracens and Culex quinquefasciatus. Mosquito larvae and adults were exposed to various concentrations of the ethyl acetate (EA) extract for 24 h. Considerable mortality was evident after the EA extract treatment for all four important vector mosquitoes. Larvicidal activity of the EA extract resulted in LC50 at 0.045 mg/mL and LC90 at 0.080 mg/mL for Ae. aegypti; LC50 at 0.060 mg/mL and LC90 at 0.247 mg/mL for Ae. albopictus; LC50 at 2.141 mg/mL and LC90 at 6.345 mg/mL for An. cracens; and LC50 at 0.272 mg/mL and LC90 at 0.980 mg/mL for Cx. quinquefasciatus. In adulticidal tests, the EA extract was the most toxic to Ae. albopictus adults (LD50 = 2.445 mg/mL; LD90 = 20.004 mg/mL), followed by An. cracens (LD50 = 5.121 mg/mL; LD90 = 147.854 mg/mL) and then Ae. aegypti (LD50 = 28.873 mg/mL; LD90 = 274.823 mg/mL). Additionally, the EA extract exhibited ovicidal activity against Ae. aegypti (LC50 = 0.715 mg/mL; LC90 = 6.956 mg/mL), Ae. albopictus (LC50 = 0.715 mg/mL; LC90 = 6.956 mg/mL), and An. cracens (LC50 = 0.715 mg/mL; LC90 = 6.956 mg/mL), evaluated up to 168 h post-treatment. It displayed no toxicity on the freshwater microalga Chlorella sp. Beijerinck UMACC 313, marine microalga Chlorella sp. Beijerinck UMACC 258 and the ant Odontoponera denticulata. In conclusion, the EA extract showed promising larvicidal, adulticidal and ovicidal activity against Ae. aegypti, Ae. albopictus, An. cracens, and Cx. quinquefasciatus (larvae only). The results suggest that the EA extract of Streptomyces sp. KSF103 has the potential to be used as an environmental-friendly approach in mosquito control. The current study would serve as an initial step toward complementing microbe-based bioinsecticides for synthetic insecticides against medically important mosquitoes.
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Cryptic specialized metabolites drive Streptomyces exploration and provide a competitive advantage during growth with other microbes. Proc Natl Acad Sci U S A 2022; 119:e2211052119. [PMID: 36161918 DOI: 10.1073/pnas.2211052119] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Streptomyces bacteria have a complex life cycle that is intricately linked with their remarkable metabolic capabilities. Exploration is a recently discovered developmental innovation of these bacteria, that involves the rapid expansion of a structured colony on solid surfaces. Nutrient availability impacts exploration dynamics, and we have found that glycerol can dramatically increase exploration rates and alter the metabolic output of exploring colonies. We show here that glycerol-mediated growth acceleration is accompanied by distinct transcriptional signatures and by the activation of otherwise cryptic metabolites including the orange-pigmented coproporphyrin, the antibiotic chloramphenicol, and the uncommon, alternative siderophore foroxymithine. Exploring cultures are also known to produce the well-characterized desferrioxamine siderophore. Mutational studies of single and double siderophore mutants revealed functional redundancy when strains were cultured on their own; however, loss of the alternative foroxymithine siderophore imposed a more profound fitness penalty than loss of desferrioxamine during coculture with the yeast Saccharomyces cerevisiae. Notably, the two siderophores displayed distinct localization patterns, with desferrioxamine being confined within the colony area, and foroxymithine diffusing well beyond the colony boundary. The relative fitness advantage conferred by the alternative foroxymithine siderophore was abolished when the siderophore piracy capabilities of S. cerevisiae were eliminated (S. cerevisiae encodes a ferrioxamine-specific transporter). Our work suggests that exploring Streptomyces colonies can engage in nutrient-targeted metabolic arms races, deploying alternative siderophores that allow them to successfully outcompete other microbes for the limited bioavailable iron during coculture.
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Alam K, Mazumder A, Sikdar S, Zhao YM, Hao J, Song C, Wang Y, Sarkar R, Islam S, Zhang Y, Li A. Streptomyces: The biofactory of secondary metabolites. Front Microbiol 2022; 13:968053. [PMID: 36246257 PMCID: PMC9558229 DOI: 10.3389/fmicb.2022.968053] [Citation(s) in RCA: 80] [Impact Index Per Article: 40.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2022] [Accepted: 08/15/2022] [Indexed: 11/13/2022] Open
Abstract
Natural products derived from microorganisms serve as a vital resource of valuable pharmaceuticals and therapeutic agents. Streptomyces is the most ubiquitous bacterial genus in the environments with prolific capability to produce diverse and valuable natural products with significant biological activities in medicine, environments, food industries, and agronomy sectors. However, many natural products remain unexplored among Streptomyces. It is exigent to develop novel antibiotics, agrochemicals, anticancer medicines, etc., due to the fast growth in resistance to antibiotics, cancer chemotherapeutics, and pesticides. This review article focused the natural products secreted by Streptomyces and their function and importance in curing diseases and agriculture. Moreover, it discussed genomic-driven drug discovery strategies and also gave a future perspective for drug development from the Streptomyces.
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Affiliation(s)
- Khorshed Alam
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Arpita Mazumder
- Department of Microbiology, University of Chittagong, Chittagong, Bangladesh
| | - Suranjana Sikdar
- Department of Microbiology, University of Chittagong, Chittagong, Bangladesh
| | - Yi-Ming Zhao
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Jinfang Hao
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Chaoyi Song
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Yanyan Wang
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
| | - Rajib Sarkar
- Industrial Microbiology Research Division, BCSIR Chattogram Laboratories, Bangladesh Council of Scientific and Industrial Research (BCSIR), Chattogram, Bangladesh
| | - Saiful Islam
- Industrial Microbiology Research Division, BCSIR Chattogram Laboratories, Bangladesh Council of Scientific and Industrial Research (BCSIR), Chattogram, Bangladesh
- Saiful Islam,
| | - Youming Zhang
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
- Chinese Academy of Sciences (CAS) Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen, China
- Youming Zhang,
| | - Aiying Li
- Helmholtz International Lab for Anti-Infectives, Shandong University-Helmholtz Institute of Biotechnology, State Key Laboratory of Microbial Technology, Shandong University, Qingdao, China
- *Correspondence: Aiying Li,
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Insecticidal characteristics and structural identification of the potential active compounds from Streptomyces sp. KR0006: Strain improvement through mutagenesis. PLoS One 2022; 17:e0274766. [PMID: 36155980 PMCID: PMC9512179 DOI: 10.1371/journal.pone.0274766] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Accepted: 09/04/2022] [Indexed: 11/19/2022] Open
Abstract
Pest control by biological means is an effective, eco-friendly, and promising method that typically involves compounds naturally derived from actinomycetes. Thus, the present study aimed to screen, characterize, and identify the structure of insecticidal compounds from Streptomyces sp. KR0006 and increase the activity through mutagenesis. In the examination of the insecticidal activity level of the isolates, Streptomyces sp. KR0006 metabolite showed significant activity against larvae and moths of Plutella xylostella. Taxonomic analyses of the 16S rRNA gene sequences revealed that the isolated KR0006 strain tended to be 99% consistent with Streptomyces cinereoruber strain NBRC 12756. Three active compounds isolated from the culture filtrate of KR0006 were purified by solvent partition, mid-pressure liquid chromatography (MPLC), Sephadex LH20 column chromatography, and high-performance liquid chromatography (HPLC). By performing 1H-NMR, 13C-NMR, and 2D-NMR experiments, and high-resolution electrospray ionization mass spectrometry analysis, the 316-HP2, 316-HP3, and 316-HP5 compounds were inferred as antimycin A3a (MW, 519.; C26H36N2O9), antimycin A8a (MW, 534; C27H38N2O9), and antimycin A1a (MW, 548; C28H40N2O9) respectively. Mutant U67 obtained from exposure to ultraviolet (UV) irradiation (254 nm, height 17 cm) for 70 seconds resulted in a 70% more larval mortality than that of the initial wild culture. The second mutation of the culture broth enhanced insecticidal activity by 80 and 100% compared with the first mutation and initial medium, respectively. Our study found that Streptomyces sp. KR0006 strain produces insecticidal active compounds and could be used for practical pest management.
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Wang Y, Yang D, Bi Y, Yu Z. Macrolides from Streptomyces sp. SN5452 and Their Antifungal Activity against Pyricularia oryzae. Microorganisms 2022; 10:1612. [PMID: 36014030 PMCID: PMC9416504 DOI: 10.3390/microorganisms10081612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2022] [Revised: 08/07/2022] [Accepted: 08/08/2022] [Indexed: 11/23/2022] Open
Abstract
Pyricularia oryzae causes rice blast, the major destructive disease in nearly all rice fields. In order to obtain highly active compounds against P. oryzae, four new 20-membered macrolides named venturicidins G-J (1-4) were isolated from the culture broth of Streptomyces sp. SN5452 along with two known ones, venturicidins A (5) and B (6). Their structures were determined by the cumulative analyses of nuclear magnetic resonance (NMR) spectroscopy and high-resolution electrospray ionization mass spectrometry (HRESIMS) data. All isolated compounds were evaluated for their antifungal activity against P. oryzae. Interestingly, these compounds exhibited obvious inhibition to mycelial growth and conidial germination of P. oryzae. Remarkably, the EC50 values of venturicidins A (5), B (6), and I (3) against mycelial growth were 0.11, 0.15 and 0.35 µg/mL, and their EC50 values of conidial germination were 0.27, 0.39 and 1.14 µg/mL, respectively. The analysis of structure-activity relationships (SARs) revealed that the methylated positions might be involved in the antifungal activity of venturicidins. These results indicate that the venturicidins are prospective candidates for novel fungicides that can be applied in controlling rice blast.
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Affiliation(s)
- Yinan Wang
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
| | - Di Yang
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
| | - Yuhui Bi
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
| | - Zhiguo Yu
- College of Plant Protection, Shenyang Agricultural University, Shenyang 110866, China
- Engineering & Technological Research Center of Biopesticide for Liaoning Province, Shenyang 110866, China
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Bi H, Xu X, Li X, Wang Y, Zhou S, Huang Y. CRISPR/Cas9-mediated Serine protease 2 disruption induces male sterility in Spodoptera litura. Front Physiol 2022; 13:931824. [PMID: 35991171 PMCID: PMC9382020 DOI: 10.3389/fphys.2022.931824] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Accepted: 07/07/2022] [Indexed: 11/13/2022] Open
Abstract
Male fertility is essential for reproduction and population growth in animals. Many factors affect male fertility, such as courtship behavior, sperm quantity, and sperm motility, among others. Seminal Fluid Proteins (SFPs) are vital components of seminal fluid in the male ejaculate, which affect male fertility, sperm activation, and female ovulation. However, the knowledge of SFPs is insufficient; the function of many SFPs remains unknown, and most described functions were mainly characterized in Drosophila or other laboratory models. Here, we focus on the Serine protease 2 (Ser2) gene in the lepidopteran pest Spodoptera litura. The Ser2 gene was specifically expressed in male adults. Disruption of the Ser2 gene mediated by CRISPR/Cas9 induced male sterility but females remained fertile. PCR-based detection of the next-generation mutants showed that male sterility was stably inherited. The qRT-PCR analysis of SlSer2 mutants showed that motor protein family genes and structural protein family genes were down-regulated, while protein modification family genes were up-regulated, suggesting that SlSer2 may be involved in sperm movement and activity. These results demonstrate that Ser2 is an important component of SFPs in seminal fluid and was identified for a useful sterile gene for pest control that may lead to new control strategies for lepidopteran insect pests such as S. litura.
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Affiliation(s)
- Honglun Bi
- State Key Laboratory of Cotton Biology, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China
| | - Xia Xu
- Institute of Sericulture and Tea Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, China
| | - Xiaowei Li
- Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Sciences/Institute of Plant Physiology and Ecology, Shanghai, China
| | - Yaohui Wang
- Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Sciences/Institute of Plant Physiology and Ecology, Shanghai, China
| | - Shutang Zhou
- State Key Laboratory of Cotton Biology, School of Life Sciences, College of Agriculture, Henan University, Kaifeng, China
- *Correspondence: Shutang Zhou, ; Yongping Huang,
| | - Yongping Huang
- Key Laboratory of Insect Developmental and Evolutionary Biology, CAS Center for Excellence in Molecular Plant Sciences/Institute of Plant Physiology and Ecology, Shanghai, China
- *Correspondence: Shutang Zhou, ; Yongping Huang,
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Draft Genome Sequences of Two Streptomyces Isolates Obtained from Volcanic Soils in the Philippines. Microbiol Resour Announc 2022; 11:e0108721. [PMID: 35142551 PMCID: PMC8830324 DOI: 10.1128/mra.01087-21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
We report here the draft genome sequences of two Streptomyces isolates, namely, UNOB3_S3 and UNOC14_S4, obtained from volcanic soils in Albay, Philippines. The genome assemblies comprised 7.63 Mb and 8.24 Mb, respectively. Genome mining revealed genes and biosynthetic gene clusters that encode putative insecticidal products.
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Shah AZ, Ma C, Zhang Y, Zhang Q, Xu G, Yang G. Decoyinine Induced Resistance in Rice against Small Brown Planthopper Laodelphax striatellus. INSECTS 2022; 13:104. [PMID: 35055947 PMCID: PMC8781946 DOI: 10.3390/insects13010104] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/26/2021] [Revised: 01/13/2022] [Accepted: 01/14/2022] [Indexed: 11/17/2022]
Abstract
Induced resistance against SBPH via microbial pesticides is considered as an eco-friendly and promising management approach. In this study, the induced resistance against SBPH in rice seedling by a new potential microbial pesticide, decoyinine (DCY), a secondary metabolite produced by Streptomyces hygroscopicus, was evaluated to investigate the effects of DCY on SBPH's biological and population parameters along with defense-related physiological and biochemical indices in rice against SBPH feeding. We found that DCY has potential to improve rice resistance and significantly reduced the fecundity of SBPH. Laboratory results revealed that DCY treated rice significantly changed SBPH's fecundity and population life table parameters. The concentrations of hydrogen peroxide (H2O2), soluble sugars and malondialdehyde (MDA) were significantly lower in DCY treated rice plants against SBPH infestation at 24, 48 and 96 hours post infestation (hpi), respectively. The concentrations of antioxidant enzymes, catalase (CAT) was significantly higher at 72 hpi, while super oxidase dismutase (SOD) and peroxidase (POD) concentrations were recorded higher at 96 hpi. The concentrations of synthases enzymes, phenyl alanine ammonia-lyase (PAL) was higher at 48 hpi, whereas polyphenol oxidase (PPO) concentration was maximum at 72 hpi against SBPH infestation. The results imply that DCY has unique properties to enhance rice resistance against SBPH by stimulating plant defensive responses. Microbial pesticides may be developed as an alternative to chemical pest control.
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Affiliation(s)
- Amir Zaman Shah
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
| | - Chao Ma
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
| | - Yuanyuan Zhang
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
| | - Qiuxin Zhang
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
| | - Gang Xu
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
- Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou 225009, China
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, The Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
| | - Guoqing Yang
- College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China; (A.Z.S.); (C.M.); (Y.Z.); (Q.Z.)
- Jiangsu Co-Innovation Center for Modern Production Technology of Grain Crops, Yangzhou University, Yangzhou 225009, China
- Joint International Research Laboratory of Agriculture and Agri-Product Safety, The Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
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Solipeta DR, Bandi S, Katragunta K, Mutheneni SR, Katragadda SB. UPLC-MS E Guided Isolation of New Antifeedant Limonoids from Fruits of Trichilia connaroides. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2020; 68:6826-6834. [PMID: 32459956 DOI: 10.1021/acs.jafc.0c00862] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
UPLC-MSE guided isolation of CHCl3 extract from the fruits of Trichilia connaroides yielded two new mexicanolide-type limonoids trichanolide F (1) and trichanolide G (2) along with a known compound carapanolide U (3). The structures of the limonoids were characterized by extensive spectroscopic analysis (MS, IR, 2D NMR). These limonoids (1-3) were evaluated for their antifeedancy against Spodoptera litura F. To further explore and draw the meaningful structure activity relationship studies, secophragmalin-type limonoids, namely, secotrichagmalin B, C (4, 5) and semisynthetic derivatives (5a-5l) were also screened for antifeedancy. The results revealed that trichanolide F (1) displayed highest antifeedant index (AFI) and caused larval mortality at 24 h. Derivative 5b caused larval toxicity, whereas 3, 5a, 5d, and 5g lead to pupal mortality and 2, 5f, 5k, and 5l caused adult deformities. Overall, the study provided new insights into the antifeedant potential of isolated and chemically modified limonoids from T. connaroides for the control of spodopteran pests.
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Affiliation(s)
- Divya Reddy Solipeta
- Centre for Natural Products & Traditional Knowledge, CSIR-Indian Institute of Chemical Technology, Uppal Road, Tarnaka, Hyderabad 500 007, Telangana, India
| | - Siva Bandi
- Centre for Natural Products & Traditional Knowledge, CSIR-Indian Institute of Chemical Technology, Uppal Road, Tarnaka, Hyderabad 500 007, Telangana, India
| | - Kumar Katragunta
- Centre for Natural Products & Traditional Knowledge, CSIR-Indian Institute of Chemical Technology, Uppal Road, Tarnaka, Hyderabad 500 007, Telangana, India
| | - Srinivasa Rao Mutheneni
- Applied Biology Division, CSIR-Indian Institute of Chemical Technology, Uppal Road, Tarnaka, Hyderabad 500 007, Telangana India
| | - Suresh Babu Katragadda
- Centre for Natural Products & Traditional Knowledge, CSIR-Indian Institute of Chemical Technology, Uppal Road, Tarnaka, Hyderabad 500 007, Telangana, India
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16
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Becher PG, Verschut V, Bibb MJ, Bush MJ, Molnár BP, Barane E, Al-Bassam MM, Chandra G, Song L, Challis GL, Buttner MJ, Flärdh K. Developmentally regulated volatiles geosmin and 2-methylisoborneol attract a soil arthropod to Streptomyces bacteria promoting spore dispersal. Nat Microbiol 2020; 5:821-829. [DOI: 10.1038/s41564-020-0697-x] [Citation(s) in RCA: 62] [Impact Index Per Article: 15.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2018] [Accepted: 02/21/2020] [Indexed: 12/28/2022]
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17
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Romano-Armada N, Yañez-Yazlle MF, Irazusta VP, Rajal VB, Moraga NB. Potential of Bioremediation and PGP Traits in Streptomyces as Strategies for Bio-Reclamation of Salt-Affected Soils for Agriculture. Pathogens 2020; 9:E117. [PMID: 32069867 PMCID: PMC7169405 DOI: 10.3390/pathogens9020117] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2019] [Revised: 01/31/2020] [Accepted: 02/08/2020] [Indexed: 12/11/2022] Open
Abstract
Environmental limitations influence food production and distribution, adding up to global problems like world hunger. Conditions caused by climate change require global efforts to be improved, but others like soil degradation demand local management. For many years, saline soils were not a problem; indeed, natural salinity shaped different biomes around the world. However, overall saline soils present adverse conditions for plant growth, which then translate into limitations for agriculture. Shortage on the surface of productive land, either due to depletion of arable land or to soil degradation, represents a threat to the growing worldwide population. Hence, the need to use degraded land leads scientists to think of recovery alternatives. In the case of salt-affected soils (naturally occurring or human-made), which are traditionally washed or amended with calcium salts, bio-reclamation via microbiome presents itself as an innovative and environmentally friendly option. Due to their low pathogenicity, endurance to adverse environmental conditions, and production of a wide variety of secondary metabolic compounds, members of the genus Streptomyces are good candidates for bio-reclamation of salt-affected soils. Thus, plant growth promotion and soil bioremediation strategies combine to overcome biotic and abiotic stressors, providing green management options for agriculture in the near future.
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Affiliation(s)
- Neli Romano-Armada
- Instituto de Investigaciones para la Industria Química (INIQUI), Universidad Nacional de Salta (UNSa)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). Av. Bolivia 5150, Salta 4400, Argentina; (N.R.-A.); (M.F.Y.-Y.); (V.P.I.); (N.B.M.)
- Facultad de Ingeniería, UNSa, Salta 4400, Argentina
| | - María Florencia Yañez-Yazlle
- Instituto de Investigaciones para la Industria Química (INIQUI), Universidad Nacional de Salta (UNSa)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). Av. Bolivia 5150, Salta 4400, Argentina; (N.R.-A.); (M.F.Y.-Y.); (V.P.I.); (N.B.M.)
- Facultad de Ciencias Naturales, UNSa, Salta 4400, Argentina
| | - Verónica P. Irazusta
- Instituto de Investigaciones para la Industria Química (INIQUI), Universidad Nacional de Salta (UNSa)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). Av. Bolivia 5150, Salta 4400, Argentina; (N.R.-A.); (M.F.Y.-Y.); (V.P.I.); (N.B.M.)
- Facultad de Ciencias Naturales, UNSa, Salta 4400, Argentina
| | - Verónica B. Rajal
- Instituto de Investigaciones para la Industria Química (INIQUI), Universidad Nacional de Salta (UNSa)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). Av. Bolivia 5150, Salta 4400, Argentina; (N.R.-A.); (M.F.Y.-Y.); (V.P.I.); (N.B.M.)
- Facultad de Ingeniería, UNSa, Salta 4400, Argentina
- Singapore Centre for Environmental Life Sciences Engineering (SCELSE), School of Biological Sciences, Nanyang Technological University, Singapore 639798, Singapore
| | - Norma B. Moraga
- Instituto de Investigaciones para la Industria Química (INIQUI), Universidad Nacional de Salta (UNSa)-Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET). Av. Bolivia 5150, Salta 4400, Argentina; (N.R.-A.); (M.F.Y.-Y.); (V.P.I.); (N.B.M.)
- Facultad de Ingeniería, UNSa, Salta 4400, Argentina
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18
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Kim JH, Choi JY, Park DH, Park DJ, Park MG, Kim SY, Ju YJ, Kim JY, Wang M, Kim CJ, Je YH. Isolation and characterization of the insect growth regulatory substances from actinomycetes. Comp Biochem Physiol C Toxicol Pharmacol 2020; 228:108651. [PMID: 31678310 DOI: 10.1016/j.cbpc.2019.108651] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/27/2019] [Revised: 10/21/2019] [Accepted: 10/26/2019] [Indexed: 11/19/2022]
Abstract
Insect growth regulators (IGRs) are attractive alternatives to chemical insecticides. Since it has been reported that secondary metabolites from actinomycetes show insecticidal activities against various insect pests, actinomycetes could be a potential source of novel IGR compounds. In the present study, insect juvenile hormone antagonists (JHANs) were identified from actinomycetes and their insect growth regulatory and insecticidal activities were investigated. A total of 363 actinomycetes were screened for their insect growth regulatory and insecticidal activities against Aedes albopictus and Plutella xylostella. Among them, Streptomyces sp. AN120537 showed the highest JHAN and insecticidal activities. Five antimycins were isolated as active compounds by assay-guided fractionation and showed high JHAN activities. These antimycins also exhibited significant insecticidal activities against A. albopictus, P. xylostella, F. occidentalis, and T. urticae. Moreover, dead larvae treated with these antimycins displayed morphological deformities that are similar to those of JH-based IGR-treated insects. This is the first report demonstrating that the insecticidal activities of antimycins resulted from their possible JHAN activity. Based on our results, it is expected that novel JHAN compounds potentially derived from actinomycetes could be efficiently applied as IGR insecticides with a broad insecticidal spectrum.
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Affiliation(s)
- Jong Hoon Kim
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Jae Young Choi
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Dong Hwan Park
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Dong-Jin Park
- Industrial Biomaterial Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Min Gu Park
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - So Young Kim
- Industrial Biomaterial Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Yoon Jung Ju
- Industrial Biomaterial Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Jun Young Kim
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Minghui Wang
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea
| | - Chang-Jin Kim
- Industrial Biomaterial Research Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Daejeon 34141, Republic of Korea
| | - Yeon Ho Je
- Department of Agricultural Biotechnology, College of Agriculture & Life Science, Seoul National University, Seoul 08826, Republic of Korea; Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul 08826, Republic of Korea.
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Composting of Vegetable Waste Using Microbial Consortium and Biocontrol Efficacy of Streptomyces Sp. Al-Dhabi 30 Isolated from the Saudi Arabian Environment for Sustainable Agriculture. SUSTAINABILITY 2019. [DOI: 10.3390/su11236845] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/27/2023]
Abstract
Thirty-seven root-associated Actinomycetes were isolated from the tomato plant for plant growth promoting activity. Among these, ten were selected for phosphate solubilisation, the production of siderophores, and indole acetic acid. Out of ten, eight Actinomycetes solubilised phosphate, whereas, Streptomyces sp. Al-Dhabi 30 showed better activity (43.1 mg/dL). Actinomycetes produced siderophore and the concentration ranged between 1.6 and 42.1 μg/mL. Streptomyces sp. Al-Dhabi 30 showed the ability to produce a maximum amount of indole acetic acid (IAA) (43 μg/mL), chitinase (43.1 U/mL), cellulase (67 U/mL), and protease (121 U/mL) than other strains. Further, vegetable waste was used as the bulk material for composting using Streptomyces sp. Al-Dhabi 30 along with microbial consortium. Total nitrogen content was 3.8% in Streptomyces sp. Al-Dhabi 30 inoculated compost, whereas 2.7% organic nitrogen was detected in the control. In the compost vegetable waste, the C:N ratio was 10.07, whereas it was 17.51 in the control. The vegetable waste composted with Streptomyces sp. Al-Dhabi 30, Lactobacillus plantarum ATCC 33222, and Candidautilis ATCC 9950 showed antagonistic activity and the supplemented compost enhanced shoot, root height, and total weightin tomato plants. These findings clearly suggest the use of Streptomyces sp. Al-Dhabi 30 as a potential biocontrol agent.
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20
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Thilagam R, Hemalatha N. Plant growth promotion and chilli anthracnose disease suppression ability of rhizosphere soil actinobacteria. J Appl Microbiol 2019; 126:1835-1849. [PMID: 30901131 DOI: 10.1111/jam.14259] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2018] [Revised: 03/06/2019] [Accepted: 03/18/2019] [Indexed: 11/27/2022]
Abstract
AIM The aim of this study was to screen potential plant growth promoting rhizobacterial (PGPR) actinobacterial isolate with effective inhibition against anthracnose causing fungal pathogen Colletotrichum capsici. METHODS AND RESULTS In this study, actinobacterias were isolated from rhizosphere soil using dilution plate method and tested for antagonistic potential against pathogenic fungi C. capsici. In primary and secondary screening tests, the actinobacterial isolate BS-26 displayed high antagonistic activity against the fungal pathogen. Isolate BS-26 was identified as Streptomyces violaceoruber based on 16S rDNA sequencing. Furthermore, indole acetic acid production, phosphate solubilization and ammonia production have been confirmed in the S. violaceoruber that suggest their potential to be used as PGPR bacteria. A green house experiment showed that application of S. violaceoruber fermentation broth reduced the incidence of the chilli anthracnose and promoted the growth of chilli seedlings with a significant increase in germination %, total plant height, fresh weight and chlorophyll content when compared to controls. CONCLUSION Streptomyces violaceoruber can be applied as a biofertilizer and biocontrol agent for growing chillies against the attack of fungal pathogen C. capsici. SIGNIFICANCE OF IMPACT OF THE STUDY The damage caused by anthracnose disease is an issue of concern, affecting negatively the economy involved in chilli cultivation. As chemical methods of control have serious disadvantages, biocontrol approach using beneficial (PGPR) micro-organisms shall be a better alternative to control crop diseases.
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Affiliation(s)
- R Thilagam
- Department of Microbiology, Periyar University, Salem, 636011, Tamilnadu, India
| | - N Hemalatha
- Department of Microbiology, Periyar University, Salem, 636011, Tamilnadu, India
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21
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Kaur M, Chadha P, Kaur S, Kaur A, Kaur R, Yadav AK, Kaur R. Evaluation of genotoxic and cytotoxic effects of ethyl acetate extract of Aspergillus flavus on Spodoptera litura. J Appl Microbiol 2019; 126:881-893. [PMID: 30216609 DOI: 10.1111/jam.14105] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2018] [Revised: 08/28/2018] [Accepted: 09/03/2018] [Indexed: 01/31/2023]
Abstract
AIM Recent concerns about the possible adverse effects of agricultural chemicals on health and environment have generated a considerable interest in biological alternatives. This study aimed to test the insecticidal potential of fungus Aspergillus flavus and revealed its genotoxic and cytotoxic effects using Spodoptera litura (Fabricius) as a model. METHODS AND RESULTS The fungus was isolated from the surface of the dead insect and investigated for its insecticidal potential against S. litura by bioassay studies. Significant increase in mortality, prolonged development period and reduced adult emergence in S. litura were observed in larva fed on diet supplemented with fungal extract. In addition, fungus was also found to cause oxidative stress, DNA damage and cell death. Significantly higher percentages of necrotic cells and DNA damage were observed in larvae treated with fungal extract. Furthermore, DNA repair studies predicted the longevity of toxic effects induced by fungus. Phytochemical and ultra-high performance liquid chromatography studies revealed the presence of phenolic compounds in the extract and liquid chromatography-mass spectrometry indicated it to be a non-aflatoxin strain of A. flavus. Fungal extract was less toxic to mammalian cell lines as compared to cytotoxic drug doxorubicin (DOX) in the MTT assay. CONCLUSION The study highlights the insecticidal potential of A. flavus by revealing its genotoxicity and cytotoxicity causing potential. This is the first report showing the genotoxic and cytotoxic effects of the fungus A. flavus on S. litura. SIGNIFICANCE AND IMPACT OF THE STUDY The study provides a useful insight to explore microbial agents as biopesticides in order to reduce various environmental as well as human health problems due to synthetic pesticides.
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Affiliation(s)
- M Kaur
- Department of Zoology, Guru Nanak Dev University, Amritsar, India
| | - P Chadha
- Department of Zoology, Guru Nanak Dev University, Amritsar, India
| | - S Kaur
- Department of Zoology, Guru Nanak Dev University, Amritsar, India
| | - A Kaur
- Departments of Microbiology, Guru Nanak Dev University, Amritsar, India
| | - R Kaur
- Departments of Microbiology, Guru Nanak Dev University, Amritsar, India
| | - A K Yadav
- Department of Biotechnology, Guru Nanak Dev University, Amritsar, India
| | - R Kaur
- Department cum National Centre for Human Genome Studies and Research, Panjab University, Chandigarh, India
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22
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Glukhova AA, Karabanova AA, Yakushev AV, Semenyuk II, Boykova YV, Malkina ND, Efimenko TA, Ivankova TD, Terekhova LP, Efremenkova OV. Antibiotic Activity of Actinobacteria from the Digestive Tract of Millipede Nedyopus dawydoffiae (Diplopoda). Antibiotics (Basel) 2018; 7:antibiotics7040094. [PMID: 30380603 PMCID: PMC6315555 DOI: 10.3390/antibiotics7040094] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/10/2018] [Revised: 10/17/2018] [Accepted: 10/24/2018] [Indexed: 11/21/2022] Open
Abstract
Because of the spread of drug resistance, it is necessary to look for new antibiotics that are effective against pathogenic microorganisms. The purpose of this study was to analyse the species composition of actinobacteria isolated from the digestive tract of the millipedes Nedyopus dawydoffiae and to determine their antimicrobial properties. Species identification was carried out on the basis of the morphological and culture properties and the sequence of the 16S rRNA gene. Actinobacteria were grown in different liquid media. Antibiotic properties were determined against some Gram-positive and Gram-negative bacteria as well as fungi. Of the 15 isolated strains, 13 have antibiotic activity against Gram-positive bacteria (including methicillin-resistant Staphylococcus aureus—MRSA) and fungi, but there was no antibiotic activity against Gram-negative test strains Escherichia coli ATCC 25922 and Pseudomonas aeruginosa ATCC 27853. It was established that antibiotic-producing actinobacteria belong to eight species of the genus Streptomyces. Depending on the nutrient medium, actinobacteria demonstrate different antimicrobial activities. As an example, S. hydrogenans shows that even strains selected in one population differ by the range of antimicrobial activity and the level of biosynthesis. Since the antibiotic production is considered as a feature for species competition in the microbiota community, the variability of antibiotic production among different strains of the same species is an adaptive characteristic for the competition in millipedes’ digestive tract community.
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Affiliation(s)
| | - Anna A Karabanova
- Gause Institute of New Antibiotics, 119021 Moscow, Russia.
- Faculty of Soil Science, Lomonosov Moscow State University, 119991 Moscow, Russia.
| | - Andrey V Yakushev
- Faculty of Soil Science, Lomonosov Moscow State University, 119991 Moscow, Russia.
| | - Irina I Semenyuk
- A.N. Severtsova Institute of Ecology and Evolution, Russian Academy of Sciences, 119071 Moscow, Russia.
- Joint Russian-Vietnamese Tropical Center, Ho Chi Minh City, Vietnam.
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Manhas RK, Kaur T. Biocontrol Potential of Streptomyces hydrogenans Strain DH16 toward Alternaria brassicicola to Control Damping Off and Black Leaf Spot of Raphanus sativus. FRONTIERS IN PLANT SCIENCE 2016; 7:1869. [PMID: 28018402 PMCID: PMC5159428 DOI: 10.3389/fpls.2016.01869] [Citation(s) in RCA: 33] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2016] [Accepted: 11/25/2016] [Indexed: 05/25/2023]
Abstract
Biocontrol agents and their bioactive metabolites provide one of the best alternatives to decrease the use of chemical pesticides. In light of this, the present investigation reports the biocontrol potential of Streptomyces hydrogenans DH16 and its metabolites towards Alternaria brassicicola, causal agent of black leaf spot and damping off of seedlings of crucifers. In vitro antibiosis of strain against pathogen revealed complete suppression of mycelial growth of pathogen, grown in potato dextrose broth supplemented with culture supernatant (20% v/v) of S. hydrogenans DH16. Microscopic examination of the fungal growth showed severe morphological abnormalities in the mycelium caused by antifungal metabolites. In vivo studies showed the efficacy of streptomycete cells and culture supernatant as seed dressings to control damping off of Raphanus sativus seedlings. Treatment of pathogen infested seeds with culture supernatant (10%) and streptomycete cells significantly improved seed germination (75-80%) and vigor index (1167-1538). Furthermore, potential of cells and culture supernatant as foliar treatment to control black leaf spot was also evaluated. Clearly visible symptoms of disease were observed in the control plants with 66.81% disease incidence and retarded growth of root system. However, disease incidence reduced to 6.78 and 1.47% in plants treated with antagonist and its metabolites, respectively. Additionally, treatment of seeds and plants with streptomycete stimulated various growth traits of plants over uninoculated control plants in the absence of pathogen challenge. These results indicate that S. hydrogenans and its culture metabolites can be developed as biofungicides as seed dressings to control seed borne pathogens, and as sprays to control black leaf spot of crucifers.
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Marathe K, Kasar S, Chaudhari A, Maheshwari V. Purification and characterization of a novel heterodimer protease inhibitor from Streptomyces spp. VL J2 with potential biopesticidal activity against H. armigera. Process Biochem 2016. [DOI: 10.1016/j.procbio.2016.08.010] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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A Novel Insecticidal Peptide SLP1 Produced by Streptomyces laindensis H008 against Lipaphis erysimi. Molecules 2016; 21:molecules21081101. [PMID: 27556442 PMCID: PMC6273262 DOI: 10.3390/molecules21081101] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2016] [Revised: 08/15/2016] [Accepted: 08/18/2016] [Indexed: 11/17/2022] Open
Abstract
Aphids are major insect pests for crops, causing damage by direct feeding and transmission of plant diseases. This paper was completed to discover and characterize a novel insecticidal metabolite against aphids from soil actinobacteria. An insecticidal activity assay was used to screen 180 bacterial strains from soil samples against mustard aphid, Lipaphis erysimi. The bacterial strain H008 showed the strongest activity, and it was identified by the phylogenetic analysis of the 16S rRNA gene and physiological traits as a novel species of genus Streptomyces (named S. laindensis H008). With the bioassay-guided method, the insecticidal extract from S. laindensis H008 was subjected to chromatographic separations. Finally, a novel insecticidal peptide was purified from Streptomyces laindensis H008 against L. erysimi, and it was determined to be S-E-P-A-Q-I-V-I-V-D-G-V-D-Y-W by TOF-MS and amino acid analysis.
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Passari AK, Mishra VK, Gupta VK, Yadav MK, Saikia R, Singh BP. In Vitro and In Vivo Plant Growth Promoting Activities and DNA Fingerprinting of Antagonistic Endophytic Actinomycetes Associates with Medicinal Plants. PLoS One 2015; 10:e0139468. [PMID: 26422789 PMCID: PMC4589368 DOI: 10.1371/journal.pone.0139468] [Citation(s) in RCA: 113] [Impact Index Per Article: 12.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2015] [Accepted: 09/14/2015] [Indexed: 11/18/2022] Open
Abstract
Endophytic actinomycetes have shown unique plant growth promoting as well as antagonistic activity against fungal phytopathogens. In the present study forty-two endophytic actinomycetes recovered from medicinal plants were evaluated for their antagonistic potential and plant growth-promoting abilities. Twenty-two isolates which showed the inhibitory activity against at least one pathogen were subsequently tested for their plant-growth promoting activities and were compared genotypically using DNA based fingerprinting, including enterobacterial repetitive intergenic consensus (ERIC) and BOX repetitive elements. Genetic relatedness based on both ERIC and BOX-PCR generates specific patterns corresponding to particular genotypes. Exponentially grown antagonistic isolates were used to evaluate phosphate solubilization, siderophores, HCN, ammonia, chitinase, indole-3-acetic acid production, as well as antifungal activities. Out of 22 isolates, the amount of indole-3-acetic acid (IAA) ranging between 10–32 μg/ml was produced by 20 isolates and all isolates were positive for ammonia production ranging between 5.2 to 54 mg/ml. Among 22 isolates tested, the amount of hydroxamate-type siderophores were produced by 16 isolates ranging between 5.2 to 36.4 μg/ml, while catechols-type siderophores produced by 5 isolates ranging from 3.2 to 5.4 μg/ml. Fourteen isolates showed the solubilisation of inorganic phosphorous ranging from 3.2 to 32.6 mg/100ml. Chitinase and HCN production was shown by 19 and 15 different isolates, respectively. In addition, genes of indole acetic acid (iaaM) and chitinase (chiC) were successively amplified from 20 and 19 isolates respectively. The two potential strains Streptomyces sp. (BPSAC34) and Leifsonia xyli (BPSAC24) were tested in vivo and improved a range of growth parameters in chilli (Capsicum annuum L.) under greenhouse conditions. This study is the first published report that actinomycetes can be isolated as endophytes from within these plants and were shown to have antagonistic and plant growth promoting abilities. These results clearly suggest the possibility of using endophytic actinomycetes as bioinoculant for plant growth promotion, nutrient mobilization or as biocontrol agent against fungal phytopathogens for sustainable agriculture.
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Affiliation(s)
- Ajit Kumar Passari
- Molecular Microbiology and Systematic Laboratory, Department of Biotechnology, Aizawl, Mizoram University, Mizoram, 796004, India
| | - Vineet Kumar Mishra
- Molecular Microbiology and Systematic Laboratory, Department of Biotechnology, Aizawl, Mizoram University, Mizoram, 796004, India
| | - Vijai Kumar Gupta
- Molecular Glyco-biotechnology Group, Department of Biochemistry, National University of Ireland Galway, Galway, Ireland
| | - Mukesh Kumar Yadav
- Korea University college of Medicine, Korea University, Seoul, South Korea
| | - Ratul Saikia
- Biotechnology Division, CSIR-North East Institute of Science & Technology, Jorhat, 785006, Assam, India
| | - Bhim Pratap Singh
- Molecular Microbiology and Systematic Laboratory, Department of Biotechnology, Aizawl, Mizoram University, Mizoram, 796004, India
- * E-mail:
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