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Huang J, Ma X, Wu H, Awuxi H, Zhang X, Chen Y, Alitengsaier N, Li Q. Retrospective study on the epidemiological characteristics of multi-pathogen infections of hospitalized severe acute respiratory tract infection and influenza-like illness in Xinjiang from January to May 2024. BMC Infect Dis 2025; 25:252. [PMID: 39988694 PMCID: PMC11849332 DOI: 10.1186/s12879-025-10654-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2024] [Accepted: 02/17/2025] [Indexed: 02/25/2025] Open
Abstract
BACKGROUND Acute respiratory tract infections are very common and can be caused by many pathogens. The aim of this study was to understand the characteristics of multi-pathogen infections of respiratory tract infections during the seasonal changes in winter and spring in Xinjiang. METHODS Throat swab samples were collected from 2791 patients with influenza-like illness (ILI) and hospitalized severe acute respiratory tract infection (SARI) in Xinjiang from January 2024 to May 2024 for multi-pathogen detection. Then, the infection frequency of pathogens and their distribution characteristics in different months, genders, regions and case classifications were analyzed. RESULTS The positive infection rate of pathogens in 2791 patients was 48.30% (1348/2791). The proportion of patients infected with respiratory pathogens in the 0-9 age group was the highest. Of all pathogens detected, MP was most common in positive patients (22.03%). The highest frequency of multiple infections was SPn. RSV, FluA and FluB were the main infectious pathogens in January and February. The number of RV, HPIV and MP infections showed an increasing trend from January to May. Compared to female patients, male patients are more likely to be infected with ADV and SPn. Compared with hospitalized SARI patients, outpatient and emergency ILI patients were more susceptible to infection with ADV and FluB. However, hospitalized SARI patients were more susceptible to infection with RSV and MP. The positive infected patients mainly came from northern Xinjiang (60.83%). Compared with other regions, the proportion of ADV positive patients in northern Xinjiang was higher. CONCLUSION This study revealed the distribution characteristics of pathogen infection in patients with respiratory tract infections in different months, genders, regions and case classifications during the seasonal changes of winter and spring in Xinjiang for the first time, which is helpful to formulate more effective treatment strategies and preventive measures. CLINICAL TRIAL NUMBER not applicable.
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Affiliation(s)
- Jia Huang
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Xin Ma
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Haiyan Wu
- Xinjiang Center for Disease Control and Prevention, No. 380, Jianquan 1st Street, Tianshan District, Urumqi, 830002, Xinjiang, China.
| | - Hundezi Awuxi
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Xuan Zhang
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Yuan Chen
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Nigedeli Alitengsaier
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
| | - Quanxi Li
- Institute of Pathogenic Biological Detection, Xinjiang Center for Disease Control and Prevention, Urumqi, Xinjiang, China
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Kulkarni D, Cong B, Ranjini MJK, Balchandani G, Chen S, Liang J, González Gordon L, Sobanjo-Ter Meulen A, Wang X, Li Y, Osei-Yeboah R, Templeton K, Nair H. The global burden of human metapneumovirus-associated acute respiratory infections in older adults: a systematic review and meta-analysis. THE LANCET. HEALTHY LONGEVITY 2025:100679. [PMID: 39954700 DOI: 10.1016/j.lanhl.2024.100679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2024] [Revised: 12/17/2024] [Accepted: 12/17/2024] [Indexed: 02/17/2025] Open
Abstract
BACKGROUND The human metapneumovirus (hMPV)-associated disease burden in older adults remains under-researched. We aimed to systematically estimate the global burden of hMPV-associated disease in older adults. METHODS We searched MEDLINE, Embase, Global Health, CINAHL, Web of Science, and Global Index Medicus in February, 2023, November, 2023, and October, 2024; and CNKI, Wanfang, and CQVip, in April, 2024, and October, 2024. We included studies conducted over at least 12 consecutive months, reporting on adults aged 60 years or older, and with laboratory-confirmed hMPV infections. Critical appraisal of included studies was conducted using the Joanna Briggs Institute critical appraisal tools. To estimate the hMPV pooled proportions positive in acute respiratory infections (ARIs), random effects meta-analyses were conducted. Using Monte Carlo simulation, we estimated the hMPV-associated hospitalisations globally and separately in high-income countries, low-income and middle-income countries, and the USA in individuals aged 65 years or older in 2019, as most studies reported on this age group. The hMPV-associated ARI incidence in countries other than the USA and in outpatient or community settings in the USA was summarised narratively due to scarcity of data. The review protocol was registered on PROSPERO (CRD42023422325). FINDINGS 46 studies conducted between 2005 and 2023, and reporting on hMPV proportion positive estimates (n=36, with 29 866 laboratory tests), hospitalisation rates in the USA (n=4), and hMPV incidence (n=6) were included. We estimated 473 000 (95% CI 396 000-777 000) hMPV-associated hospitalisations globally, of which 185 000 (105 000-340 000) were in high-income countries (n=6 studies), and 288 000 (193 000-436 000) in low-income and middle-income countries (n=10 studies) in people aged 65 years or older in 2019. In the USA, the pooled hMPV-associated hospitalisation rate was 231 (95% CI 41-421) per 100 000 people in adults aged 65 years or older, representing approximately 122 000 (41 000-398 000) hospital admissions in this population in 2019. INTERPRETATION hMPV-associated ARIs contribute to a substantial disease and hospitalisation burden in older adults. However, more large-scale surveillance studies and greater investment in research and diagnostic methods are required to develop reliable estimates. FUNDING Icosavax, a member of the AstraZeneca group.
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Affiliation(s)
- Durga Kulkarni
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK
| | - Bingbing Cong
- Department of Epidemiology, National Vaccine Innovation Platform, School of Public Health, Nanjing Medical University, Nanjing, China
| | | | | | - Shuting Chen
- Department of Biostatistics, School of Public Health, Nanjing Medical University, Nanjing, China
| | - Jingyi Liang
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK
| | - Lina González Gordon
- The Roslin Institute, College of Medicine and Veterinary Medicine, University of Edinburgh, UK
| | - Ajoke Sobanjo-Ter Meulen
- Icosavax, Vaccines and Immune Therapies, BioPharmaceuticals Medical, AstraZeneca, Seattle, WA, USA
| | - Xin Wang
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK; Department of Epidemiology, National Vaccine Innovation Platform, School of Public Health, Nanjing Medical University, Nanjing, China; Changzhou Third People's Hospital, Changzhou Medical Center, Nanjing Medical University, Changzhou, China
| | - You Li
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK; Department of Epidemiology, National Vaccine Innovation Platform, School of Public Health, Nanjing Medical University, Nanjing, China
| | - Richard Osei-Yeboah
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK
| | - Kate Templeton
- Viral Genotyping Reference Laboratory Edinburgh, NHS Lothian, Royal Infirmary of Edinburgh, Edinburgh, UK
| | - Harish Nair
- Centre for Global Health, Usher Institute, University of Edinburgh, Edinburgh, UK; School of Public Health, Nanjing Medical University, Nanjing, China; MRC/Wits Rural Public Health and Health Transitions Research Unit (Agincourt), School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.
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Bandeira TDJPG, Oliveira ALSD, Martins LFP, Matos RM, Santos SRNGD, Lopes MC, Sobreira RTP, Rocha HAL. Molecular detection of respiratory viruses: an observational study on respiratory co-infections in children and adults. Braz J Microbiol 2024:10.1007/s42770-024-01581-x. [PMID: 39690324 DOI: 10.1007/s42770-024-01581-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2024] [Accepted: 11/28/2024] [Indexed: 12/19/2024] Open
Abstract
Respiratory tract infection (RTI) is the most important cause of visiting both public and private medical care services. During the decade preceding Covid-19, in developing countries, there was a gap in the epidemiology of respiratory viral infections, probably due to the difficulty of detecting viral agents in clinical microbiology laboratories routine, at that time. In this context, the aim of this study was to describe the occurrence of virus, demographic factors associated and the likelihood of coinfections detection by multiplex PCR methods. The target also was to determine the involvement of respiratory viruses other than SARS-CoV-2 as agents of upper respiratory tract infections (URTIs) using rapid respiratory panels by multiplex real time PCR with flow chip methodology. Samples of SARSs patients, 530 in total, were tested between 2022 and 2023, obtained from nasopharyngeal swabs, nasopharyngeal exudates or nasopharyngeal aspirates. Of 530 tests, 30% was human rhinovirus, the most prevalent, followed by respiratory syncytial virus B (21.5%) and human adenovirus (17.4%). Among the total of positive samples, 83.8% belonged to patients aged between 0 and 10 years, 62.6% of whom were aged between 1 and 10 years. Multiple virus detection was found in 50.4% of the samples tested, 93.1% of which were from patients under the age of 18. Viral co-infection was evident in the finding and was higher (88.7%) in patients under the age of 18 yeas.
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