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Clancy EA, Morin EL, Hajian G, Merletti R. Tutorial. Surface electromyogram (sEMG) amplitude estimation: Best practices. J Electromyogr Kinesiol 2023; 72:102807. [PMID: 37552918 DOI: 10.1016/j.jelekin.2023.102807] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 06/01/2023] [Accepted: 08/01/2023] [Indexed: 08/10/2023] Open
Abstract
This tutorial intends to provide insight, instructions and "best practices" for those who are novices-including clinicians, engineers and non-engineers-in extracting electromyogram (EMG) amplitude from the bipolar surface EMG (sEMG) signal of voluntary contractions. A brief discussion of sEMG amplitude extraction from high density sEMG (HDsEMG) arrays and feature extraction from electrically elicited contractions is also provided. This tutorial attempts to present its main concepts in a straightforward manner that is accessible to novices in the field not possessing a wide range of technical background (if any) in this area. Surface EMG amplitude, also referred to as the sEMG envelope [often implemented as root mean square (RMS) sEMG or average rectified value (ARV) sEMG], quantifies the voltage variation of the sEMG signal and is grossly related to the overall neural excitation of the muscle and to peripheral parameters. The tutorial briefly reviews the physiological origin of the voluntary sEMG signal and sEMG recording, including electrode configurations, sEMG signal transduction, electronic conditioning and conversion by an analog-to-digital converter. These topics have been covered in greater detail in prior tutorials in this series. In depth descriptions of state-of-the-art methods for computing sEMG amplitude are then provided, including guidance on signal pre-conditioning, absolute value vs. square-law detection, selection of appropriate sEMG amplitude smoothing filters and attenuation of measurement noise. The tutorial provides a detailed list of best practices for sEMG amplitude estimation.
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Affiliation(s)
| | - Evelyn L Morin
- Department of Electrical and Computer Engineering, Queen's University, Kingston, Ontario, Canada.
| | - Gelareh Hajian
- Toronto Rehab Research Institute, University Health Network, Toronto, Ontario, Canada.
| | - Roberto Merletti
- LISiN, Dept. of Electronics and Telecommunications, Politecnico di Torino, Torino, Italy.
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Zhang Z, Gao B. Mechanism of Hyperbaric Oxygen Combined with Astaxanthin Mediating Keap1/Nrf2/HO-1 Pathway to Improve Exercise Fatigue in Mice. COMPUTATIONAL INTELLIGENCE AND NEUROSCIENCE 2022; 2022:6444747. [PMID: 35875785 PMCID: PMC9300351 DOI: 10.1155/2022/6444747] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/02/2022] [Revised: 04/25/2022] [Accepted: 06/27/2022] [Indexed: 11/25/2022]
Abstract
Objective This work aimed to explore the application and optimization of the electrophysiological monitoring system to real-time monitor the exercise-induced fatigue (EIF) animals and investigate the intervention mechanism of hyperbaric oxygen (HBO) combined with natural astaxanthin (NAX) on EIF. Methods First, a system was constructed for acquisition, processing, and feature extraction of electrocardiograph (ECG) signal and surface electromyography (EMG) signal for EIF monitoring. The mice were randomly divided into a control group (CG), EIF group (EG), HBO treatment (HBO) group, and HBO combined with NAX treatment (HBO + NAX) group. The effect of the constructed system on classification recognition of EIF was analyzed. The levels of serum antioxidative stress indicators of mice in each group were detected, including malondialdehyde (MDA), catalase (CAT), superoxide dismutase (SOD), glutathione (GSH), glutathione-peroxidation (GSH-Px), and total antioxidant capacity (T-AOC). In addition, the mRNA and protein levels of Keap1/Nrf2/HO-1 pathway related genes in liver tissue were detected. Results The results showed that the normalized least mean squares algorithm effectively removed the motion artifact interference of ECG signal and can clearly display the signal peak, and high-pass filtering and power frequency filtering effectively removed the motion and baseline drift interference of surface EMG signal. The recognition sensitivity, specificity, and accuracy of the EIF recognition model based on the long- and short-term memory network were 90.0%, 93.3%, and 92.5%, respectively. Compared with the CG, the characteristics of ECG signal and surface EMG signal of the mice in the EIF group changed greatly (P < 0.05); the serum MDA level was increased obviously; the CAT, SOD, GSH, GSH-Px, and T-AOC levels were observably reduced (P < 0.05); the expressions of Keap1 and HO-1 in the liver were reduced remarkably, while the expression of Nrf2 was increased notably (P < 0.05). Compared with the EIF group, the characteristics of ECG signal and surface EMG signal of the mice in the HBO and HBO + NAX groups were obviously improved (P < 0.05); the serum MDA level was significantly reduced; the CAT, SOD, GSH, GSH-Px, and T-AOC levels were greatly increased (P < 0.05); the expressions of Keap1 and HO-1 in the liver were greatly increased, while the expression of Nrf2 was decreased sharply (P < 0.05). Conclusion Therefore, the feature extraction and classification system of ECG signal combined with surface EMG signal could realize real-time monitoring of EIF status. HBO intervention could improve the body's ability to resist oxidative stress through the Keap1/Nrf2/HO-1 pathway and then improve the EIF state. In addition, the improvement effect of HBO + NAX was more obvious.
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Affiliation(s)
- Zheng Zhang
- School of Kinesiology, Shanghai University of Sport, Shanghai 200438, China
| | - Binghong Gao
- School of Physical Education and Sport Training, Shanghai University of Sport, Shanghai 200030, China
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Niu J, Jiang N. Pseudo-online detection and classification for upper-limb movements. J Neural Eng 2022; 19. [PMID: 35688127 DOI: 10.1088/1741-2552/ac77be] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/02/2022] [Accepted: 06/10/2022] [Indexed: 02/08/2023]
Abstract
Objective. This study analyzed detection (movement vs. non-movement) and classification (different types of movements) to decode upper-limb movement volitions in a pseudo-online fashion.Approach. Nine healthy subjects executed four self-initiated movements: left wrist extension, right wrist extension, left index finger extension, and right index finger extension. For detection, we investigated the performance of three individual classifiers (support vector machine (SVM), EEGNET, and Riemannian geometry featured SVM) on three frequency bands (0.05-5 Hz, 5-40 Hz, 0.05-40 Hz). The best frequency band and the best classifier combinations were constructed to realize an ensemble processing pipeline using majority voting. For classification, we used adaptive boosted Riemannian geometry model to differentiate contra-lateral and ipsilateral movements.Main results. The ensemble model achieved 79.6 ± 8.8% true positive rate and 3.1 ± 1.2 false positives per minute with 75.3 ± 112.6 ms latency on a pseudo-online detection task. The following classification gave around 67% accuracy to differentiate contralateral movements.Significance. The newly proposed ensemble method and pseudo-online testing procedure could provide a robust brain-computer interface design for movement decoding.
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Affiliation(s)
- Jiansheng Niu
- Department of Systems Design Engineering, University of Waterloo, Waterloo, Ontario, Canada
| | - Ning Jiang
- National Clinical Research Center for Geriatric, West China Hospital Sichuan University, Chengdu, Sichuan, People's Republic of China.,Med-X Center for Manufacturing, Sichuan University, Chengdu, Sichuan, People's Republic of China
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Research on AR-AKF Model Denoising of the EMG Signal. COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE 2021; 2021:9409560. [PMID: 34790256 PMCID: PMC8592758 DOI: 10.1155/2021/9409560] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Accepted: 09/11/2021] [Indexed: 11/28/2022]
Abstract
Electromyography (EMG) signals can be used for clinical diagnosis and biomedical applications. It is very important to reduce noise and to acquire accurate signals for the usage of the EMG signals in biomedical engineering. Since EMG signal noise has the time-varying and random characteristics, the present study proposes an adaptive Kalman filter (AKF) denoising method based on an autoregressive (AR) model. The AR model is built by applying the EMG signal, and the relevant parameters are integrated to find the state space model required to optimally estimate AKF, eliminate the noise in the EMG signal, and restore the damaged EMG signal. To be specific, AR autoregressive dynamic modeling and repair for distorted signals are affected by noise, and AKF adaptively can filter time-varying noise. The denoising method based on the self-learning mechanism of AKF exhibits certain capabilities to achieve signal tracking and adaptive filtering. It is capable of adaptively regulating the model parameters in the absence of any prior statistical knowledge regarding the signal and noise, which is aimed at achieving a stable denoising effect. By comparatively analyzing the denoising effects exerted by different methods, the EMG signal denoising method based on the AR-AKF model is demonstrated to exhibit obvious advantages.
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Xie J, Peng L, Wei L, Gong Y, Zuo F, Wang J, Yin C, Li Y. A signal quality assessment-based ECG waveform delineation method used for wearable monitoring systems. Med Biol Eng Comput 2021; 59:2073-2084. [PMID: 34432182 DOI: 10.1007/s11517-021-02425-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Accepted: 08/05/2021] [Indexed: 10/20/2022]
Abstract
Identifying transient and nonpersistent abnormal electrocardiogram (ECG) waveforms by continuously monitoring the high-risk populations is of great importance for the diagnosis, treatment, and prevention of cardiovascular diseases. In recent years, fabric electrodes have been widely used in wearable devices because of their non-irritating properties and better comfort than traditional AgCl electrodes. However, the motion noise caused by the relative movement between the fabric electrodes and skin affects the quality of ECGs and reduces the accuracy of diagnosis. Therefore, delineating the ECG waveforms that are recorded from wearable devices with varying levels of noise is still challenging. In this study, a signal quality assessment (SQA)-based ECG waveform delineation method that is used for wearable systems was developed. The ECG signal was first preprocessed by a bandpass filter. Five indices, including the multiscale nonlinear amplitude statistical distribution (adSQI1, adSQI2), the proportion of energy-related to T wave (ptSQI), and heart rates computed from R waves and T waves (rHR and tHR, respectively), were then calculated from the preprocessed ECG signal. The signals were classified as good, acceptable, and unacceptable ECGs by combining these indices through the use of a neural network. Subsequently, the R waves or/and T waves were identified for the corresponding feature interpretations based on the SQA results. ECGs that were recorded from the chest belts from 29 volunteers at different activity statuses were divided into 4-s segments. A total of 7133 manually labeled segments were used to derive (4985 segments) and validate (2148 segments) the algorithm. The adSQI1, adSQI2, tHR, and rHR characteristics were significantly different among the good, acceptable, and unacceptable ECGs. The ptSQI value was considerably higher in the good ECGs than in the acceptable and unacceptable ECGs. The ECG segments of different quality levels were classified with an accuracy of 96.74% by using the proposed SQA method. The R waves and T waves were identified with accuracies of 99.95% and 99.57%, respectively, for segments that were classified as acceptable and/or good. The SQA-based ECG waveform delineation method can perform reliable analysis and has the potential to be applied in wearable ECG systems for the early diagnosis and prevention of cardiovascular diseases.
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Affiliation(s)
- Jialing Xie
- Department of Biomedical Engineering and Imaging Medicine, Army Medical University, 30 Gaotanyan Main Street, Chongqing, 400038, China
| | - Li Peng
- Department of Biomedical Engineering and Imaging Medicine, Army Medical University, 30 Gaotanyan Main Street, Chongqing, 400038, China
| | - Liang Wei
- Department of Biomedical Engineering and Imaging Medicine, Army Medical University, 30 Gaotanyan Main Street, Chongqing, 400038, China
| | - Yushun Gong
- Department of Biomedical Engineering and Imaging Medicine, Army Medical University, 30 Gaotanyan Main Street, Chongqing, 400038, China
| | - Feng Zuo
- Department of Information Technology, Southwest Hospital, Army Medical University, Chongqing, 400038, China
| | - Juan Wang
- Department of Emergency, Southwest Hospital, Army Medical University, Chongqing, 400038, China
| | - Changlin Yin
- Department of Critical Care Medicine, Southwest Hospital, Army Medical University, Chongqing, 400038, China
| | - Yongqin Li
- Department of Biomedical Engineering and Imaging Medicine, Army Medical University, 30 Gaotanyan Main Street, Chongqing, 400038, China.
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Peri E, Xu L, Ciccarelli C, Vandenbussche NL, Xu H, Long X, Overeem S, van Dijk JP, Mischi M. Singular Value Decomposition for Removal of Cardiac Interference from Trunk Electromyogram. SENSORS 2021; 21:s21020573. [PMID: 33467431 PMCID: PMC7829983 DOI: 10.3390/s21020573] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/09/2020] [Revised: 01/04/2021] [Accepted: 01/12/2021] [Indexed: 01/10/2023]
Abstract
A new algorithm based on singular value decomposition (SVD) to remove cardiac contamination from trunk electromyography (EMG) is proposed. Its performance is compared to currently available algorithms at different signal-to-noise ratios (SNRs). The algorithm is applied on individual channels. An experimental calibration curve to adjust the number of SVD components to the SNR (0–20 dB) is proposed. A synthetic dataset is generated by the combination of electrocardiography (ECG) and EMG to establish a ground truth reference for validation. The performance is compared with state-of-the-art algorithms: gating, high-pass filtering, template subtraction (TS), and independent component analysis (ICA). Its applicability on real data is investigated in an illustrative diaphragm EMG of a patient with sleep apnea. The SVD-based algorithm outperforms existing methods in reconstructing trunk EMG. It is superior to the others in the time (relative mean squared error < 15%) and frequency (shift in mean frequency < 1 Hz) domains. Its feasibility is proven on diaphragm EMG, which shows a better agreement with the respiratory cycle (correlation coefficient = 0.81, p-value < 0.01) compared with TS and ICA. Its application on real data is promising to non-obtrusively estimate respiratory effort for sleep-related breathing disorders. The algorithm is not limited to the need for additional reference ECG, increasing its applicability in clinical practice.
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Affiliation(s)
- Elisabetta Peri
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Correspondence:
| | - Lin Xu
- School of Information Science and Technology, ShanghaiTech University, Shanghai 201210, China;
| | - Christian Ciccarelli
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Nele L. Vandenbussche
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
| | - Hongji Xu
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Xi Long
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
| | - Sebastiaan Overeem
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
| | - Johannes P. van Dijk
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
- Center for Sleep Medicine, Kempenhaeghe, P.O. Box 61, 5590 AB Heeze, The Netherlands;
- Department of Orthodontics, University of Ulm, 89081 Ulm, Germany
| | - Massimo Mischi
- Department of Electrical Engineering, Eindhoven University of Technology, 5600 MB Eindhoven, The Netherlands; (C.C.); (H.X.); (X.L.); (S.O.); (J.P.v.D.); (M.M.)
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Zhou D, Qiu S, Tan J, Li X, Chen C. Research on Applications of FastICA Algorithm in the Detection of Dangerous Liquids. INT J PATTERN RECOGN 2018. [DOI: 10.1142/s0218001419580035] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
In the actual environment of security detection, many kinds of liquids often exist in the same detection background, and their dangerous levels are difficult to identify. Therefore, it is very important to research on identifying the dangerous levels of various liquids. The paper establishes the [Formula: see text]-parameter database of tested samples under specific detection environment with free space method. In the actual detection, ultra-wide-band (UWB) centimeter wave is used to measure the [Formula: see text]-parameters of several detected liquids first. Then the fast independent component analysis (FastICA) algorithm is used for unmixing the mixed signal by Newton’s iteration method and the negative entropy maximization search principle. The unmixed signal matches with the sample database adaptively, so the dangerous levels of the detected liquids are identified. Multiple experiments show that FastICA algorithm can reach a matching rate of 95% between water and 90[Formula: see text] gasoline or alcohol and 90[Formula: see text] gasoline, it also can reach a matching rate of around 73% between water and alcohol. This algorithm has a quick response and high reliability for identification of dangerous liquids. FastICA algorithm in this paper is applied for detecting the dangerous liquids for the first time, and it has high application value.
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Affiliation(s)
- Dongmei Zhou
- College of Information Science and Technology, Chengdu University of Technology, Chengdu 610059, P. R. China
| | - Shi Qiu
- Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an 710119, P. R. China
| | - Jiahai Tan
- Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an 710119, P. R. China
| | - Xiaofeng Li
- College of Information Science and Technology, Chengdu University of Technology, Chengdu 610059, P. R. China
| | - Chen Chen
- College of Information Science and Technology, Chengdu University of Technology, Chengdu 610059, P. R. China
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de Moura KDOA, Balbinot A. Virtual Sensor of Surface Electromyography in a New Extensive Fault-Tolerant Classification System. SENSORS (BASEL, SWITZERLAND) 2018; 18:E1388. [PMID: 29723994 PMCID: PMC5982165 DOI: 10.3390/s18051388] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2018] [Revised: 04/15/2018] [Accepted: 04/26/2018] [Indexed: 11/17/2022]
Abstract
A few prosthetic control systems in the scientific literature obtain pattern recognition algorithms adapted to changes that occur in the myoelectric signal over time and, frequently, such systems are not natural and intuitive. These are some of the several challenges for myoelectric prostheses for everyday use. The concept of the virtual sensor, which has as its fundamental objective to estimate unavailable measures based on other available measures, is being used in other fields of research. The virtual sensor technique applied to surface electromyography can help to minimize these problems, typically related to the degradation of the myoelectric signal that usually leads to a decrease in the classification accuracy of the movements characterized by computational intelligent systems. This paper presents a virtual sensor in a new extensive fault-tolerant classification system to maintain the classification accuracy after the occurrence of the following contaminants: ECG interference, electrode displacement, movement artifacts, power line interference, and saturation. The Time-Varying Autoregressive Moving Average (TVARMA) and Time-Varying Kalman filter (TVK) models are compared to define the most robust model for the virtual sensor. Results of movement classification were presented comparing the usual classification techniques with the method of the degraded signal replacement and classifier retraining. The experimental results were evaluated for these five noise types in 16 surface electromyography (sEMG) channel degradation case studies. The proposed system without using classifier retraining techniques recovered of mean classification accuracy was of 4% to 38% for electrode displacement, movement artifacts, and saturation noise. The best mean classification considering all signal contaminants and channel combinations evaluated was the classification using the retraining method, replacing the degraded channel by the virtual sensor TVARMA model. This method recovered the classification accuracy after the degradations, reaching an average of 5.7% below the classification of the clean signal, that is the signal without the contaminants or the original signal. Moreover, the proposed intelligent technique minimizes the impact of the motion classification caused by signal contamination related to degrading events over time. There are improvements in the virtual sensor model and in the algorithm optimization that need further development to provide an increase the clinical application of myoelectric prostheses but already presents robust results to enable research with virtual sensors on biological signs with stochastic behavior.
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Affiliation(s)
- Karina de O A de Moura
- Electrical Engineering, Instrumentation Laboratory, Federal University of Rio Grande do Sul (UFRGS), Avenue Osvaldo Aranha 103, Porto Alegre, RS 90035-190, Brazil.
| | - Alexandre Balbinot
- Electrical Engineering, Instrumentation Laboratory, Federal University of Rio Grande do Sul (UFRGS), Avenue Osvaldo Aranha 103, Porto Alegre, RS 90035-190, Brazil.
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A new algorithm for ECG interference removal from single channel EMG recording. AUSTRALASIAN PHYSICAL & ENGINEERING SCIENCES IN MEDICINE 2017; 40:575-584. [DOI: 10.1007/s13246-017-0564-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2017] [Accepted: 06/08/2017] [Indexed: 11/26/2022]
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