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For: Misof B, Meusemann K, von Reumont BM, Kück P, Prohaska SJ, Stadler PF. A priori assessment of data quality in molecular phylogenetics. Algorithms Mol Biol 2014. [DOI: 10.1186/s13015-014-0022-4] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023]  Open
Number Cited by Other Article(s)
1
Haag J, Hübner L, Kozlov AM, Stamatakis A. The Free Lunch is not over yet-systematic exploration of numerical thresholds in maximum likelihood phylogenetic inference. BIOINFORMATICS ADVANCES 2023;3:vbad124. [PMID: 37750068 PMCID: PMC10518076 DOI: 10.1093/bioadv/vbad124] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 09/04/2023] [Accepted: 09/12/2023] [Indexed: 09/27/2023]
2
Haag J, Höhler D, Bettisworth B, Stamatakis A. From Easy to Hopeless-Predicting the Difficulty of Phylogenetic Analyses. Mol Biol Evol 2022;39:6832260. [PMID: 36395091 PMCID: PMC9728795 DOI: 10.1093/molbev/msac254] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
3
Vasilikopoulos A, Gustafson GT, Balke M, Niehuis O, Beutel RG, Misof B. Resolving the phylogenetic position of Hygrobiidae (Coleoptera: Adephaga) requires objective statistical tests and exhaustive phylogenetic methodology: a response to Cai et al. (2020). Mol Phylogenet Evol 2020;162:106923. [PMID: 32771549 DOI: 10.1016/j.ympev.2020.106923] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2020] [Accepted: 08/03/2020] [Indexed: 12/20/2022]
4
Paetzold C, Wood KR, Eaton DAR, Wagner WL, Appelhans MS. Phylogeny of Hawaiian Melicope (Rutaceae): RAD-seq Resolves Species Relationships and Reveals Ancient Introgression. FRONTIERS IN PLANT SCIENCE 2019;10:1074. [PMID: 31608076 PMCID: PMC6758601 DOI: 10.3389/fpls.2019.01074] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Accepted: 08/07/2019] [Indexed: 05/11/2023]
5
Matos-Maraví P, Duarte Ritter C, Barnes CJ, Nielsen M, Olsson U, Wahlberg N, Marquina D, Sääksjärvi I, Antonelli A. Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices and experimental design for genomic studies. PeerJ 2019;7:e6727. [PMID: 31106048 PMCID: PMC6499058 DOI: 10.7717/peerj.6727] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2018] [Accepted: 03/06/2019] [Indexed: 12/18/2022]  Open
6
Evangelista D, Thouzé F, Kohli MK, Lopez P, Legendre F. Topological support and data quality can only be assessed through multiple tests in reviewing Blattodea phylogeny. Mol Phylogenet Evol 2018;128:112-122. [PMID: 29969656 DOI: 10.1016/j.ympev.2018.05.007] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2018] [Revised: 05/07/2018] [Accepted: 05/08/2018] [Indexed: 11/18/2022]
7
Fonseca LHM, Lohmann LG. Plastome Rearrangements in the "Adenocalymma-Neojobertia" Clade (Bignonieae, Bignoniaceae) and Its Phylogenetic Implications. FRONTIERS IN PLANT SCIENCE 2017;8:1875. [PMID: 29163600 PMCID: PMC5672021 DOI: 10.3389/fpls.2017.01875] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Accepted: 10/16/2017] [Indexed: 05/02/2023]
8
Yeates DK, Meusemann K, Trautwein M, Wiegmann B, Zwick A. Power, resolution and bias: recent advances in insect phylogeny driven by the genomic revolution. CURRENT OPINION IN INSECT SCIENCE 2016;13:16-23. [PMID: 27436549 DOI: 10.1016/j.cois.2015.10.007] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2015] [Revised: 10/08/2015] [Accepted: 10/18/2015] [Indexed: 06/06/2023]
9
Schrödl M, Stöger I. A review on deep molluscan phylogeny: old markers, integrative approaches, persistent problems. J NAT HIST 2014. [DOI: 10.1080/00222933.2014.963184] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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