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For: Gärtner F, Höner zu Siederdissen C, Müller L, Stadler PF. Coordinate systems for supergenomes. Algorithms Mol Biol 2018;13:15. [PMID: 30258487 PMCID: PMC6151955 DOI: 10.1186/s13015-018-0133-4] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2017] [Accepted: 09/07/2018] [Indexed: 01/05/2023]  Open
Number Cited by Other Article(s)
1
Leger A, Brettell I, Monahan J, Barton C, Wolf N, Kusminski N, Herder C, Aadepu N, Becker C, Gierten J, Hammouda OT, Hasel E, Lischik C, Lust K, Sokolova N, Suzuki R, Tavhelidse T, Thumberger T, Tsingos E, Watson P, Welz B, Naruse K, Loosli F, Wittbrodt J, Birney E, Fitzgerald T. Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel. Genome Biol 2022;23:58. [PMID: 35189951 PMCID: PMC8862245 DOI: 10.1186/s13059-022-02602-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2021] [Accepted: 01/05/2022] [Indexed: 12/23/2022]  Open
2
Guo J, Pang E, Song H, Lin K. A tri-tuple coordinate system derived for fast and accurate analysis of the colored de Bruijn graph-based pangenomes. BMC Bioinformatics 2021;22:282. [PMID: 34044757 PMCID: PMC8161984 DOI: 10.1186/s12859-021-04149-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2021] [Accepted: 04/25/2021] [Indexed: 11/25/2022]  Open
3
Hennig A, Nieselt K. Efficient merging of genome profile alignments. Bioinformatics 2019;35:i71-i80. [PMID: 31510683 PMCID: PMC6612806 DOI: 10.1093/bioinformatics/btz377] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]  Open
4
Gärtner F, Müller L, Stadler PF. Superbubbles revisited. Algorithms Mol Biol 2018;13:16. [PMID: 30519278 PMCID: PMC6271648 DOI: 10.1186/s13015-018-0134-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2018] [Accepted: 11/21/2018] [Indexed: 11/10/2022]  Open
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