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De Tran Q, Nguyen CQ, Dang QL, Minh Nguyen TH, Buu Hue BT, Thi Le MU, Tuan NT, Chau Thanh NQ, Men TT, Quan PM, Tuan ND, Cam TT, Thu Thuy NT, Bich Hau VT, Binh TD, Nguyen HP. ZIKV Inhibitors Based on Pyrazolo[3,4- d]pyridazine-7-one Core: Rational Design, In Vitro Evaluation, and Theoretical Studies. ACS OMEGA 2023; 8:48994-49008. [PMID: 38162759 PMCID: PMC10753549 DOI: 10.1021/acsomega.3c06612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/02/2023] [Revised: 11/21/2023] [Accepted: 11/27/2023] [Indexed: 01/03/2024]
Abstract
The Zika virus (ZIKV) is believed to cause birth defects, and no anti-ZIKV drugs have been approved by medical organizations to date. Starting from antimicrobial lead compounds with a pyrazolo[3,4-d]pyridazine-7-one scaffold, we synthesized 16 derivatives and screened their ability to interfere with ZIKV infection utilizing a cell-based phenotypic assay. Of these, five compounds showed significant inhibition of ZIKV with a selective index value greater than 4.6. In particular, compound 9b showed the best anti-ZIKV activity with a selectivity index of 22.4 (half-maximal effective concentration = 25.6 μM and 50% cytotoxic concentration = 572.4 μM). Through the brine shrimp lethality bioassay, 9b, 10b, 12, 17a, and 19a showed median lethal dose values in a range of 87.2-100.3 μg/mL. Compound 9b was also targeted to the NS2B-NS3 protease of ZIKV using molecular docking protocols, in which it acted as a noncompetitive inhibitor and strongly bound to five key amino acids (His51, Asp75, Ser135, Ala132, Tyr161). Utilizing the pharmacophore model of 9b, the top 20 hits were identified as prospective inhibitors of NS2B-NS3 protease, and six of them were confirmed for their stability with the protease via redocking and molecular dynamics simulations.
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Affiliation(s)
- Quang De Tran
- Department
of Chemistry, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
- Analytical
Techniques Lab (1.16-AT Department of Chemistry L), CTU High-tech
Building, Can Tho University, Can Tho 94000, Vietnam
| | - Cuong Quoc Nguyen
- Department
of Chemistry, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
- Analytical
Techniques Lab (1.16-AT Department of Chemistry L), CTU High-tech
Building, Can Tho University, Can Tho 94000, Vietnam
| | - Quang Le Dang
- Institute
for Tropical Technology, Vietnam Academy
of Science and Technology, Hanoi 10072, Vietnam
- Graduate
University of Science and Technology, Vietnam
Academy of Science and Technology, Hanoi 10072, Vietnam
| | - Thi Hong Minh Nguyen
- Department
of Life Science, University of Science and
Technology of Ha Noi, Vietnam Academy of Science and Technology, Ha Noi 10072, Vietnam
| | - Bui Thi Buu Hue
- Department
of Chemistry, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
| | - Minh Uyen Thi Le
- Department
of Surgery, Division of Transplant Surgery, Indiana University School of Medicine, Indianapolis 46202, Indiana, United States
| | - Nguyen Trong Tuan
- Department
of Chemistry, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
| | - Nguyen Quoc Chau Thanh
- Department
of Chemistry, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
| | - Tran Thanh Men
- Department
of Biology, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
| | - Pham Minh Quan
- Graduate
University of Science and Technology, Vietnam
Academy of Science and Technology, Hanoi 10072, Vietnam
- Institute
of Natural Products Chemistry, Vietnam Academy
of Science and Technology, Ha Noi 10072, Vietnam
| | | | | | - Nguyen Thi Thu Thuy
- National Institute of Hygiene and Epidemiology, No 1 Yersin, Hai Ba Trung, Ha Noi 10000, Vietnam
| | - Vu Thi Bich Hau
- National Institute of Hygiene and Epidemiology, No 1 Yersin, Hai Ba Trung, Ha Noi 10000, Vietnam
| | - Tran Duy Binh
- Department
of Biology, College of Natural Sciences, Can Tho University, Can Tho 94000, Vietnam
| | - Hong Phuong Nguyen
- Department
of Pediatrics, Indiana University School
of Medicine, Indianapolis 46202, Indiana, United States
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Alizadeh SR, Ebrahimzadeh MA. Pyrazolotriazines: Biological activities, synthetic strategies and recent developments. Eur J Med Chem 2021; 223:113537. [PMID: 34147747 DOI: 10.1016/j.ejmech.2021.113537] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Revised: 05/03/2021] [Accepted: 05/10/2021] [Indexed: 10/21/2022]
Abstract
Heterocyclic compounds create an important class of molecules that demonstrates various chemical spaces for the definition of effective medicines. Many N-heterocycles display numerous biological activities. Among condensed heterocycles, pyrazolotriazine derivatives have received the attention of researchers owing to the extensive spectrum of biological activities. The reactivity of identified compounds was similar to the free azoles and triazines. The pyrazolotriazine scaffold exhibited antiasthma, antiinflammatory, anticancer, antithrombogenic activity and showed activity for major depression and pathological anxiety. Pyrazolotriazine derivatives also exhibited antibacterial, anticancer, antimetabolites, antidiabetic, antiamoebic, anticonvulsant, antiproliferative activity, human carbonic anhydrase inhibition, cyclin-dependent kinase 2 inhibition, tyrosinase and urease inhibition, MAO-B inhibition, TTK inhibition, thymidine phosphorylase inhibition, tubulin polymerization inhibition, protoporphyrinogen oxidase inhibition, GABAA agonistic activity, hCRF1 receptor antagonistic activity, and CGRP receptor antagonistic activity. This paper structurally categorized various pyrazolotriazines to isomeric classes into six groups that containing pyrazolo [1,5-d] [1,2,4] triazine, pyrazolo [5,1-c] [1,2,4] triazine, pyrazolo [3,4-e] [1,2,4] triazine, pyrazolo [4,3-e] [1,2,4] triazines, pyrazolo [1,5-a] [1,3,5] triazine, and pyrazolo [3,4-d] [1,2,3] triazine and expressed biological activity, the synthetic procedures for each class of pyrazolotriazines, structure-activity relationship and their mechanism of action. Generally, this review summarily indicated the past and present studies about the discovery of new lead compounds with good biological activity.
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Affiliation(s)
- Seyedeh Roya Alizadeh
- Department of Medicinal Chemistry, School of Pharmacy and Pharmaceutical Sciences Research Center, Hemoglobinopathy Institute, Mazandaran University of Medical Sciences, Sari, Iran
| | - Mohammad Ali Ebrahimzadeh
- Department of Medicinal Chemistry, School of Pharmacy and Pharmaceutical Sciences Research Center, Hemoglobinopathy Institute, Mazandaran University of Medical Sciences, Sari, Iran.
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Recent advances in the chemistry of thieno[2,3-b]pyridines 1. Methods of synthesis of thieno[2,3-b]pyridines. Russ Chem Bull 2020. [DOI: 10.1007/s11172-020-2969-2] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022]
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New pyrazolopyrimidine derivatives with anticancer activity: Design, synthesis, PIM-1 inhibition, molecular docking study and molecular dynamics. Bioorg Chem 2020; 100:103944. [PMID: 32450389 DOI: 10.1016/j.bioorg.2020.103944] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2020] [Revised: 04/07/2020] [Accepted: 05/12/2020] [Indexed: 11/21/2022]
Abstract
In this study, new pyrazolopyrimidine derivatives were designed and evaluated for anticancer activity. PIM-1 inhibitiory activity were measured for the most potent compounds. Molecular docking study and molecular dynamics were also done. Thus, the novel derivatives of pyrazolo[1,5-a]pyrimidine have been synthesized and characterized using different spectroscopic techniques. HMBC and NOESY experiments were used to confirm regiospecific structure of pyrimidine ring. The newly synthesized derivatives were evaluated for their antitumor activities against HCT-116 and MCF-7 cell lines. These derivatives showed clear in vitro antitumor activities. Compound 5h showed the highest bioactivity (IC50 = 1.51 µM) against HCT-116 cell line. While, compound 6c was the most potent derivative, its IC50 was 7.68 µM against MCF-7 cell line. Compounds 5c, 5g, 5h, 6a and 6c showed PIM-1 inhibitory activity with IC50 of 1.26, 0.95, 0.60, 1.82, 0.67, respectively µM that could be correlated with their cytotoxic effect. Molecular docking study was done to predict the mode of binding of the target compounds inside PIM-1 active site. The molecular dynamic simulation was conducted in order to evaluate stability of binding of the tested compounds.
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Sadchikova EV, Alexeeva DL, Nenajdenko VG. Trifluoroacetyl substituted pyrazolotriazines: synthesis and pathways of formation. MENDELEEV COMMUNICATIONS 2020. [DOI: 10.1016/j.mencom.2020.03.016] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Salem MA, Helal MH, Gouda MA, Abd EL-Gawad HH, Shehab MAM, El-Khalafawy A. Recent synthetic methodologies for pyrazolo[1,5-a]pyrimidine. SYNTHETIC COMMUN 2019. [DOI: 10.1080/00397911.2019.1604967] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/26/2022]
Affiliation(s)
- Mohamed A. Salem
- Department of Chemistry, Faculty of Science and Arts, King Khalid University, Mohail Asir, Saudi Arabia
| | - Mohamed H. Helal
- Department of Chemistry, Faculty of Arts and Science, Northern Border University, Rafha, Saudi Arabia
| | - Moustafa A. Gouda
- Department of Chemistry, Faculty of Science and Arts, Ulla Taibah University, Medina, Saudi Arabia
| | - Hala H. Abd EL-Gawad
- Department of Chemistry, Faculty of Science and Arts, King Khalid University, Mohail Asir, Saudi Arabia
| | - Marwa A. M. Shehab
- Department of Chemistry, Faculty of Science and Arts, King Khalid University, Mohail Asir, Saudi Arabia
| | - Abeer El-Khalafawy
- Department of Chemistry, Faculty of Science, King Khalid University, Abha, Saudi Arabia
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Abdelhamid AO, El Sayed IE, Zaki YH, Hussein AM, Mangoud MM, Hosny MA. Utility of 5-(furan-2-yl)-3-( p-tolyl)-4,5-dihydro-1 H-pyrazole-1-carbothioamide in the synthesis of heterocyclic compounds with antimicrobial activity. BMC Chem 2019; 13:48. [PMID: 31384796 PMCID: PMC6661803 DOI: 10.1186/s13065-019-0566-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Accepted: 03/22/2019] [Indexed: 12/26/2022] Open
Abstract
Background Pyrazolines show different biological activities. In recent years, interest in the chemistry of hydrazonoyl halides has been renewed. 1,3,4-Thiadiazoles are one of the most common heterocyclic pharmacophores with a wide range of biological activities. Results Ethyl 2-(5-(furan-2-yl)-3-(p-tolyl)-4,5-dihydro-1H-pyrazol-1-yl)-4-methyl-thiazole-5-carboxylate, 2-(5-(furan-2-yl)-3-(p-tolyl)-4,5-dihydro-1H-pyrazol-1-yl)thiazol-4(5H)-one, and 1-(2-(5-(furan-2-yl)-3-(p-tolyl)-4,5-dihydro-1H-pyrazol-1-yl)-4-methylthiazol-5-yl)ethan-1-one were synthesized from the reaction of 5-(furan-2-yl)-3-(p-tolyl)-4,5-dihydro-1H-pyrazole-1-carbothioamide with different halogenated compounds. Thiazole, 1,3,4-thiadiazole and pyrano[2,3-d]thiazole derivatives were also synthesized. The structures of the newly synthesized compounds were elucidated based on elemental analysis, spectral data, and alternative synthetic routes whenever possible. Additionally, the newly synthesized compounds were screened for antimicrobial activity against various microorganisms. Conclusions A new series of novel functionalized 1,3,4-thiadiazoles, 1,3-thiazoles, and pyrazoline-containing moieties were synthesized using hydrazonoyl halides as precursors and evaluated for their in vitro antibacterial, and antifungal activities. The antimicrobial results of the examined compounds revealed promising results and some derivatives have activities similar to the references used.![]() Electronic supplementary material The online version of this article (10.1186/s13065-019-0566-y) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Abdou O Abdelhamid
- 1Department of Chemistry, Faculty of Science, Cairo University, Giza, 12613 Egypt
| | - Ibrahim E El Sayed
- 2Department of Chemistry, Faculty of Science, El Menoufia University, Shebin El Koom, 32511 Egypt
| | - Yasser H Zaki
- 3Department of Chemistry, Faculty of Science, Beni-Suef University, Beni-Suef, 62514 Egypt
| | - Ahmed M Hussein
- 3Department of Chemistry, Faculty of Science, Beni-Suef University, Beni-Suef, 62514 Egypt
| | - Mangoud M Mangoud
- Environmental Research Department, National Center for Social and Criminological Research, IbnKhaldoun Square, Mohandesin, Zamalek, Giza, 11561 Egypt
| | - Mona A Hosny
- 5Department of Chemistry, Faculty of Women for Arts, Science and Education, Ain Shams University, Heliopolis, Cairo, 11757 Egypt
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