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Ren H, Xu N. Forecasting and mapping dengue fever epidemics in China: a spatiotemporal analysis. Infect Dis Poverty 2024; 13:50. [PMID: 38956632 PMCID: PMC11221048 DOI: 10.1186/s40249-024-01219-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2023] [Accepted: 06/20/2024] [Indexed: 07/04/2024] Open
Abstract
BACKGROUND Dengue fever (DF) has emerged as a significant public health concern in China. The spatiotemporal patterns and underlying influencing its spread, however, remain elusive. This study aims to identify the factors driving these variations and to assess the city-level risk of DF epidemics in China. METHODS We analyzed the frequency, intensity, and distribution of DF cases in China from 2003 to 2022 and evaluated 11 natural and socioeconomic factors as potential drivers. Using the random forest (RF) model, we assessed the contributions of these factors to local DF epidemics and predicted the corresponding city-level risk. RESULTS Between 2003 and 2022, there was a notable correlation between local and imported DF epidemics in case numbers (r = 0.41, P < 0.01) and affected cities (r = 0.79, P < 0.01). With the increase in the frequency and intensity of imported epidemics, local epidemics have become more severe. Their occurrence has increased from five to eight months per year, with case numbers spanning from 14 to 6641 per month. The spatial distribution of city-level DF epidemics aligns with the geographical divisions defined by the Huhuanyong Line (Hu Line) and Qin Mountain-Huai River Line (Q-H Line) and matched well with the city-level time windows for either mosquito vector activity (83.59%) or DF transmission (95.74%). The RF models achieved a high performance (AUC = 0.92) when considering the time windows. Importantly, they identified imported cases as the primary influencing factor, contributing significantly (24.82%) to local DF epidemics at the city level in the eastern region of the Hu Line (E-H region). Moreover, imported cases were found to have a linear promoting impact on local epidemics, while five climatic and six socioeconomic factors exhibited nonlinear effects (promoting or inhibiting) with varying inflection values. Additionally, this model demonstrated outstanding accuracy (hitting ratio = 95.56%) in predicting the city-level risks of local epidemics in China. CONCLUSIONS China is experiencing an increasing occurrence of sporadic local DF epidemics driven by an unavoidably higher frequency and intensity of imported DF epidemics. This research offers valuable insights for health authorities to strengthen their intervention capabilities against this disease.
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Affiliation(s)
- Hongyan Ren
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China.
| | - Nankang Xu
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, 100101, China
- College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, 100049, China
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Zhang L, Wang D, Shi P, Li J, Niu J, Chen J, Wang G, Wu L, Chen L, Yang Z, Li S, Meng J, Ruan F, He Y, Zhao H, Ren Z, Wang Y, Liu Y, Shi X, Wang Y, Liu Q, Li J, Wang P, Wang J, Zhu Y, Cheng G. A naturally isolated symbiotic bacterium suppresses flavivirus transmission by Aedes mosquitoes. Science 2024; 384:eadn9524. [PMID: 38669573 DOI: 10.1126/science.adn9524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2024] [Accepted: 03/15/2024] [Indexed: 04/28/2024]
Abstract
The commensal microbiota of the mosquito gut plays a complex role in determining the vector competence for arboviruses. In this study, we identified a bacterium from the gut of field Aedes albopictus mosquitoes named Rosenbergiella sp. YN46 (Rosenbergiella_YN46) that rendered mosquitoes refractory to infection with dengue and Zika viruses. Inoculation of 1.6 × 103 colony forming units (CFUs) of Rosenbergiella_YN46 into A. albopictus mosquitoes effectively prevents viral infection. Mechanistically, this bacterium secretes glucose dehydrogenase (RyGDH), which acidifies the gut lumen of fed mosquitoes, causing irreversible conformational changes in the flavivirus envelope protein that prevent viral entry into cells. In semifield conditions, Rosenbergiella_YN46 exhibits effective transstadial transmission in field mosquitoes, which blocks transmission of dengue virus by newly emerged adult mosquitoes. The prevalence of Rosenbergiella_YN46 is greater in mosquitoes from low-dengue areas (52.9 to ~91.7%) than in those from dengue-endemic regions (0 to ~6.7%). Rosenbergiella_YN46 may offer an effective and safe lead for flavivirus biocontrol.
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Affiliation(s)
- Liming Zhang
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
- Institute of Infectious Diseases, Shenzhen Bay Laboratory, Shenzhen 518000, China
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, Shenzhen 518055, China
| | - Daxi Wang
- Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI Research, Shenzhen 518083, China
| | - Peibo Shi
- Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI Research, Shenzhen 518083, China
- College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China
| | - Juzhen Li
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Jichen Niu
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Jielong Chen
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Gang Wang
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Linjuan Wu
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Lu Chen
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
| | - Zhenxing Yang
- Yunnan Tropical and Subtropical Animal Viral Disease Laboratory, Yunnan Animal Science and Veterinary Institute, Kunming, Yunnan 650000, China
| | - Susheng Li
- Yunnan Tropical and Subtropical Animal Viral Disease Laboratory, Yunnan Animal Science and Veterinary Institute, Kunming, Yunnan 650000, China
| | - Jinxin Meng
- Yunnan Tropical and Subtropical Animal Viral Disease Laboratory, Yunnan Animal Science and Veterinary Institute, Kunming, Yunnan 650000, China
| | - Fangchao Ruan
- Kunming Medical University, Kunming, Yunnan 650000, China
| | - Yuwen He
- Yunnan Tropical and Subtropical Animal Viral Disease Laboratory, Yunnan Animal Science and Veterinary Institute, Kunming, Yunnan 650000, China
| | - Hailong Zhao
- Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI Research, Shenzhen 518083, China
| | - Zirui Ren
- Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI Research, Shenzhen 518083, China
| | - Yibaina Wang
- China National Center for Food Safety Risk Assessment, Beijing 100022, China
| | - Yang Liu
- Institute of Infectious Diseases, Shenzhen Bay Laboratory, Shenzhen 518000, China
| | - Xiaolu Shi
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, Shenzhen 518055, China
| | - Yunfu Wang
- Institute of Neuroscience, Hubei University of Medicine, Shiyan, Hubei 442000, China
| | - Qiyong Liu
- National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing 102206, China
| | - Junhua Li
- Shenzhen Key Laboratory of Unknown Pathogen Identification, BGI Research, Shenzhen 518083, China
| | - Penghua Wang
- Department of Immunology, School of Medicine, University of Connecticut Health Center, Farmington, CT 06030, USA
| | - Jinglin Wang
- Yunnan Tropical and Subtropical Animal Viral Disease Laboratory, Yunnan Animal Science and Veterinary Institute, Kunming, Yunnan 650000, China
| | - Yibin Zhu
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, Shenzhen 518055, China
| | - Gong Cheng
- New Cornerstone Science Laboratory, Tsinghua University-Peking University Joint Center for Life Sciences, School of Basic Medical Sciences, Tsinghua University, Beijing 100084, China
- Institute of Infectious Diseases, Shenzhen Bay Laboratory, Shenzhen 518000, China
- Institute of Pathogenic Organisms, Shenzhen Center for Disease Control and Prevention, Shenzhen 518055, China
- Southwest United Graduate School, Kunming 650092, China
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Pakaya R, Daniel D, Widayani P, Utarini A. Spatial model of Dengue Hemorrhagic Fever (DHF) risk: scoping review. BMC Public Health 2023; 23:2448. [PMID: 38062404 PMCID: PMC10701958 DOI: 10.1186/s12889-023-17185-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2023] [Accepted: 11/08/2023] [Indexed: 12/18/2023] Open
Abstract
BACKGROUND Creating a spatial model of dengue fever risk is challenging duet to many interrelated factors that could affect dengue. Therefore, it is crucial to understand how these critical factors interact and to create reliable predictive models that can be used to mitigate and control the spread of dengue. METHODS This scoping review aims to provide a comprehensive overview of the important predictors, and spatial modelling tools capable of producing Dengue Haemorrhagic Fever (DHF) risk maps. We conducted a methodical exploration utilizing diverse sources, i.e., PubMed, Scopus, Science Direct, and Google Scholar. The following data were extracted from articles published between January 2011 to August 2022: country, region, administrative level, type of scale, spatial model, dengue data use, and categories of predictors. Applying the eligibility criteria, 45 out of 1,349 articles were selected. RESULTS A variety of models and techniques were used to identify DHF risk areas with an arrangement of various multiple-criteria decision-making, statistical, and machine learning technique. We found that there was no pattern of predictor use associated with particular approaches. Instead, a wide range of predictors was used to create the DHF risk maps. These predictors may include climatology factors (e.g., temperature, rainfall, humidity), epidemiological factors (population, demographics, socio-economic, previous DHF cases), environmental factors (land-use, elevation), and relevant factors. CONCLUSIONS DHF risk spatial models are useful tools for detecting high-risk locations and driving proactive public health initiatives. Relying on geographical and environmental elements, these models ignored the impact of human behaviour and social dynamics. To improve the prediction accuracy, there is a need for a more comprehensive approach to understand DHF transmission dynamics.
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Affiliation(s)
- Ririn Pakaya
- Doctoral Program in Public Health, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia.
- Department of Public Health, Public Health Faculty, Universitas Gorontalo, Gorontalo, Indonesia.
| | - D Daniel
- Department of Health Behaviour, Environment and Social Medicine, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Prima Widayani
- Department of Geographic Information Science, Faculty of Geography, Universitas Gadjah Mada, Yogyakarta, Indonesia
| | - Adi Utarini
- Doctoral Program in Public Health, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
- Department of Health Policy and Management, Faculty of Medicine, Public Health and Nursing, Universitas Gadjah Mada, Yogyakarta, Indonesia
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Ouattara CA, Traore TI, Ouedraogo B, Sylla B, Traore S, Meda CZ, Sangare I, Savadogo LBG. Spatio-Temporal Determinants of Dengue Epidemics in the Central Region of Burkina Faso. Trop Med Infect Dis 2023; 8:482. [PMID: 37999601 PMCID: PMC10675449 DOI: 10.3390/tropicalmed8110482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Revised: 10/22/2023] [Accepted: 10/24/2023] [Indexed: 11/25/2023] Open
Abstract
The aim of this study was to analyze the spatio-temporal distribution and determinants of the 2017 dengue epidemic in Burkina Faso. A principal component analysis of meteorological and environmental factors was performed to reduce dimensions and avoid collinearities. An initial generalized additive model assessed the impact of the components derived from this analysis on dengue incidence. Dengue incidence increased mainly with relative humidity, precipitation, normalized difference vegetation index and minimum temperature with an 8-week lag. A Kulldoff Satscan scan was used to identify high-risk dengue clusters, and a second generalized additive model assessed the risk of a health area being at high risk according to land-use factors. The spatio-temporal distribution of dengue fever was heterogeneous and strongly correlated with meteorological factors. The rural communes of Sabaa and Koubri were the areas most at risk. This study provides useful information for planning targeted dengue control strategies in Burkina Faso.
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Affiliation(s)
- Cheick Ahmed Ouattara
- Doctoral School of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso;
| | - Tiandiogo Isidore Traore
- Higher Institute of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso; (T.I.T.); (C.Z.M.); (I.S.); (L.B.G.S.)
| | - Boukary Ouedraogo
- Directorate of Health Information Systems, Ministry of Health, Ouagadougou 7009, Burkina Faso; (B.O.); (B.S.)
| | - Bry Sylla
- Directorate of Health Information Systems, Ministry of Health, Ouagadougou 7009, Burkina Faso; (B.O.); (B.S.)
| | - Seydou Traore
- Doctoral School of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso;
| | - Clement Ziemle Meda
- Higher Institute of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso; (T.I.T.); (C.Z.M.); (I.S.); (L.B.G.S.)
| | - Ibrahim Sangare
- Higher Institute of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso; (T.I.T.); (C.Z.M.); (I.S.); (L.B.G.S.)
| | - Leon Blaise G. Savadogo
- Higher Institute of Health Sciences, Nazi Boni University, Bobo-Dioulasso 1091, Burkina Faso; (T.I.T.); (C.Z.M.); (I.S.); (L.B.G.S.)
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Seposo X, Valenzuela S, Apostol GL. Socio-economic factors and its influence on the association between temperature and dengue incidence in 61 Provinces of the Philippines, 2010-2019. PLoS Negl Trop Dis 2023; 17:e0011700. [PMID: 37871125 PMCID: PMC10621993 DOI: 10.1371/journal.pntd.0011700] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2023] [Revised: 11/02/2023] [Accepted: 10/04/2023] [Indexed: 10/25/2023] Open
Abstract
BACKGROUND Temperature has a significant impact on dengue incidence, however, changes on the temperature-dengue relationship across axes of socio-economic vulnerability is not well described. This study sought to determine the association between dengue and temperature in multiple locations in the Philippines and explore the effect modification by socio-economic factors. METHOD Nationwide dengue cases per province from 2010 to 2019 and data on temperature were obtained from the Philippines' Department of Health-Epidemiological Bureau and ERA5-land, respectively. A generalized additive mixed model (GAMM) with a distributed lag non-linear model was utilized to examine the association between temperature and dengue incidence. We further implemented an interaction analysis in determining how socio-economic factors modify the association. All analyses were implemented using R programming. RESULTS Nationwide temperature-dengue risk function was noted to depict an inverted U-shaped pattern. Dengue risk increased linearly alongside increasing mean temperature from 15.8 degrees Celsius and peaking at 27.5 degrees Celsius before declining. However, province-specific analyses revealed significant heterogeneity. Socio-economic factors had varying impact on the temperature-dengue association. Provinces with high population density, less people in urban areas with larger household size, high poverty incidence, higher health spending per capita, and in lower latitudes were noted to exhibit statistically higher dengue risk compared to their counterparts at the upper temperature range. CONCLUSIONS This observational study found that temperature was associated with dengue incidence, and that this association is more apparent in locations with high population density, less people in urban areas with larger household size, high poverty incidence, higher health spending per capita, and in lower latitudes. Differences with socio-economic conditions is linked with dengue risk. This highlights the need to develop interventions tailor-fit to local conditions.
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Affiliation(s)
- Xerxes Seposo
- Department of Hygiene, Hokkaido University, Sapporo, Hokkaido Japan
- School of Tropical Medicine and Global Health, Nagasaki University, Nagasaki, Japan
- Ateneo School of Medicine and Public Health, Ateneo de Manila University, Pasig, Philippines
| | - Sary Valenzuela
- Ateneo School of Medicine and Public Health, Ateneo de Manila University, Pasig, Philippines
| | - Geminn Louis Apostol
- Ateneo School of Medicine and Public Health, Ateneo de Manila University, Pasig, Philippines
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Singh G, Soman B, Grover GS. Exploratory Spatio-Temporal Data Analysis (ESTDA) of Dengue and its association with climatic, environmental, and sociodemographic factors in Punjab, India. ECOL INFORM 2023. [DOI: 10.1016/j.ecoinf.2023.102020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/12/2023]
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Lu W, Ren H. Diseases spectrum in the field of spatiotemporal patterns mining of infectious diseases epidemics: A bibliometric and content analysis. Front Public Health 2023; 10:1089418. [PMID: 36699887 PMCID: PMC9868952 DOI: 10.3389/fpubh.2022.1089418] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Accepted: 12/21/2022] [Indexed: 01/12/2023] Open
Abstract
Numerous investigations of the spatiotemporal patterns of infectious disease epidemics, their potential influences, and their driving mechanisms have greatly contributed to effective interventions in the recent years of increasing pandemic situations. However, systematic reviews of the spatiotemporal patterns of communicable diseases are rare. Using bibliometric analysis, combined with content analysis, this study aimed to summarize the number of publications and trends, the spectrum of infectious diseases, major research directions and data-methodological-theoretical characteristics, and academic communities in this field. Based on 851 relevant publications from the Web of Science core database, from January 1991 to September 2021, the study found that the increasing number of publications and the changes in the disease spectrum have been accompanied by serious outbreaks and pandemics over the past 30 years. Owing to the current pandemic of new, infectious diseases (e.g., COVID-19) and the ravages of old infectious diseases (e.g., dengue and influenza), illustrated by the disease spectrum, the number of publications in this field would continue to rise. Three logically rigorous research directions-the detection of spatiotemporal patterns, identification of potential influencing factors, and risk prediction and simulation-support the research paradigm framework in this field. The role of human mobility in the transmission of insect-borne infectious diseases (e.g., dengue) and scale effects must be extensively studied in the future. Developed countries, such as the USA and England, have stronger leadership in the field. Therefore, much more effort must be made by developing countries, such as China, to improve their contribution and role in international academic collaborations.
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Affiliation(s)
- Weili Lu
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China,College of Resources and Environment, University of Chinese Academy of Sciences, Beijing, China
| | - Hongyan Ren
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China,*Correspondence: Hongyan Ren ✉
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Zhang Y, Ren H, Shi R. Influences of Differentiated Residence and Workplace Location on the Identification of Spatiotemporal Patterns of Dengue Epidemics: A Case Study in Guangzhou, China. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:13393. [PMID: 36293969 PMCID: PMC9603590 DOI: 10.3390/ijerph192013393] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/31/2022] [Revised: 10/10/2022] [Accepted: 10/13/2022] [Indexed: 06/16/2023]
Abstract
The location of the infections is the basic data for precise prevention and control of dengue fever (DF). However, most studies default to residence address as the place of infection, ignoring the possibility that cases are infected at other places (e.g., workplace address). This study aimed to explore the spatiotemporal patterns of DF in Guangzhou from 2016 to 2018, differentiating workplace and residence. In terms of temporal and spatial dimensions, a case weight assignment method that differentiates workplace and residence location was proposed, taking into account the onset of cases around their workplace and residence. Logistic modeling was used to classify the epidemic phases. Spatial autocorrelation analysis was used to reveal the high and early incidence areas of DF in Guangzhou from 2016 to 2018. At high temporal resolution, the DF in Guangzhou has apparent phase characteristics and is consistent with logistic growth. The local epidemic is clustered in terms of the number of cases and the time of onset and outbreak. High and early epidemic areas are mainly distributed in the central urban areas of Baiyun, Yuexiu, Liwan and Haizhu districts. The high epidemic areas due to commuting cases can be further identified after considering the workplaces of cases. Improving the temporal resolution and differentiating the workplace and residence address of cases could help to improve the identification of early and high epidemic areas in analyzing the spatiotemporal patterns of dengue fever in Guangzhou, which could more reasonably reflect the spatiotemporal patterns of DF in the study area.
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Affiliation(s)
- Yuqi Zhang
- State Key Laboratory of Geographic Information Science, Ministry of Education, East China Normal University, Shanghai 200241, China
- Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
- School of Geographic Sciences, East China Normal University, Shanghai 200241, China
- Key Laboratory of Spatial-Temporal Big Data Analysis and Application of Natural Resources in Megacities, Ministry of Natural Resources, Shanghai 200241, China
- Joint Laboratory for Environmental Remote Sensing and Data Assimilation, ECNU&CEODE Ministry of Education, East China Normal University, Shanghai 200241, China
| | - Hongyan Ren
- Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China
| | - Runhe Shi
- State Key Laboratory of Geographic Information Science, Ministry of Education, East China Normal University, Shanghai 200241, China
- School of Geographic Sciences, East China Normal University, Shanghai 200241, China
- Key Laboratory of Spatial-Temporal Big Data Analysis and Application of Natural Resources in Megacities, Ministry of Natural Resources, Shanghai 200241, China
- Joint Laboratory for Environmental Remote Sensing and Data Assimilation, ECNU&CEODE Ministry of Education, East China Normal University, Shanghai 200241, China
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Ren H, Lu W, Li X, Shen H. Specific urban units identified in tuberculosis epidemic using a geographical detector in Guangzhou, China. Infect Dis Poverty 2022; 11:44. [PMID: 35428318 PMCID: PMC9012046 DOI: 10.1186/s40249-022-00967-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2021] [Accepted: 04/07/2022] [Indexed: 12/11/2022] Open
Abstract
Background A remarkable drop in tuberculosis (TB) incidence has been achieved in China, although in 2019 it was still considered the second most communicable disease. However, TB’s spatial features and risk factors in urban areas remain poorly understood. This study aims to identify the spatial differentiations and potential influencing factors of TB in highly urbanized regions on a fine scale. Methods This study included 18 socioeconomic and environmental variables in the four central districts of Guangzhou, China. TB case data obtained from the Guangzhou Institute of Tuberculosis Control and Prevention. Before using Pearson correlation and a geographical detector (GD) to identify potential influencing factors, we conducted a global spatial autocorrelation analysis to select an appropriate spatial scales. Results Owing to its strong spatial autocorrelation (Moran’s I = 0.33, Z = 4.71), the 2 km × 2 km grid was selected as the spatial scale. At this level, TB incidence was closely associated with most socioeconomic variables (0.31 < r < 0.76, P < 0.01). Of five environmental factors, only the concentration of fine particulate matter displayed significant correlation (r = 0.21, P < 0.05). Similarly, in terms of q values derived from the GD, socioeconomic variables had stronger explanatory abilities (0.08 < q < 0.57) for the spatial differentiation of the 2017 incidence of TB than environmental variables (0.06 < q < 0.27). Moreover, a much larger proportion (0.16 < q < 0.89) of the spatial differentiation was interpreted by pairwise interactions, especially those (0.60 < q < 0.89) related to the 2016 incidence of TB, officially appointed medical institutions, bus stops, and road density. Conclusions The spatial heterogeneity of the 2017 incidence of TB in the study area was considerably influenced by several socioeconomic and environmental factors and their pairwise interactions on a fine scale. We suggest that more attention should be paid to the units with pairwise interacting factors in Guangzhou. Our study provides helpful clues for local authorities implementing more effective intervention measures to reduce TB incidence in China’s municipal areas, which are featured by both a high degree of urbanization and a high incidence of TB. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s40249-022-00967-z.
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Ouattara CA, Traore S, Sangare I, Traore TI, Meda ZC, Savadogo LGB. Spatiotemporal analysis of dengue fever in Burkina Faso from 2016 to 2019. BMC Public Health 2022; 22:462. [PMID: 35255865 PMCID: PMC8903647 DOI: 10.1186/s12889-022-12820-x] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2021] [Accepted: 02/21/2022] [Indexed: 11/10/2022] Open
Abstract
Background Burkina Faso experienced an epidemic resurgence of dengue in 2016, which led to the implementation of several control strategies. In order to allow a better adaptation of these strategies, we studied the spatio-temporal distribution of dengue. Methods Monthly dengue cases from 2016 to 2019, aggregated at the health district level, were used to map the crude incidence, excess risk, and smoothed incidence of dengue in Burkina Faso with GeoDa software. A Kulldoff scan on Satscan software was then used to identify spatio-temporal clustering of cases. Results The results show that the distribution of dengue fever across the health districts of Burkina Faso is heterogeneous. Dengue was considered non-endemic in 9 out of the 70 health districts, minimally endemic in 45 districts (< 10 incidences), moderately endemic (10-100 incidences) in 12 districts, and highly endemic (> 100 incidences) in 4 districts. The main cluster covered the health districts of Baskuy, Nongr-massom, Sig-noghin, Boulmiougou, and Bogodogo. The months of October and November corresponded to the peak of cases and a significant temporal cluster in 2017. Conclusion This study identified the spatial and temporal clustering of dengue cases in Burkina Faso. These results may help to develop better preventive strategies. Supplementary Information The online version contains supplementary material available at 10.1186/s12889-022-12820-x.
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Affiliation(s)
- Cheick Ahmed Ouattara
- NAZI BONI University, Centre Hospitalier Universitaire Souro Sanou, Bobo-Dioulasso, Burkina Faso.
| | - Seydou Traore
- Centre Hospitalier Universitaire Souro Sanou, Bobo-Dioulasso, Burkina Faso
| | | | | | - Ziemlé Clément Meda
- NAZI BONI University, Centre Hospitalier Universitaire Souro Sanou, Bobo-Dioulasso, Burkina Faso
| | - Léon G Blaise Savadogo
- NAZI BONI University, Centre Hospitalier Universitaire Souro Sanou, Bobo-Dioulasso, Burkina Faso
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Wang J, Sun J, Sun L, Ye Y, Chen H, Xiao J, He G, Hu J, Chen G, Zhou H, Dong X, Ma W, Zhang B, Liu T. The Seroprevalence of Dengue Virus Infection and Its Association With Iron (Fe) Level in Pregnant Women in Guangzhou, China. Front Med (Lausanne) 2021; 8:759728. [PMID: 34957145 PMCID: PMC8702999 DOI: 10.3389/fmed.2021.759728] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Accepted: 11/23/2021] [Indexed: 11/13/2022] Open
Abstract
Dengue fever is regarded as the most prevalent mosquito-borne viral disease in humans. However, information of dengue virus (DENV) infection in pregnant women and the influence factors remain unclear. In this study, we extracted information of 2,076 pregnant women from the Prenatal Environment and Offspring Health (PEOH) birth cohort conducted since 2016 in Guangzhou, China. Peripheral blood and clean midstream urine samples of participants were collected during their hospitalization for childbirth. Indirect enzyme-linked immunosorbent assay (ELISA) was used to detect immunoglobulin G (IgG) antibodies of DENV in serum samples, and inductively coupled plasma mass spectrometry (ICP-MS) was applied to determine the Fe concentrations in the urine samples, which were then adjusted for by urine creatinine and transformed by natural logarithm (ln-Fe). The seroprevalence of DENV IgG antibody in all included participants was 2.22% (46/2,076). We observed higher seroprevalence of IgG antibody in women aged ≥35 years (2.9%), education ≤ 12 years (2.5%), yearly income per capita <100,000 yuan (2.4%), no use of air-conditioner (2.4%), no use of mosquito coils (2.3%), and no exercise during pregnancy (4.1%). A U-shaped relationship was found between ln-Fe concentration and the risk of positive IgG antibody. Compared with women with ln-Fe concentration of 2.0–2.9 μg/g creatinine, slightly higher risks of positive IgG antibody were found among women with ≤2.0 (RR = 4.16, 95% CI: 0.78, 19.91), 3.0–3.9 (RR = 1.93, 95% CI: 0.65, 7.08), 4.0–4.9 (RR = 2.19, 95% CI: 0.65, 8.51), and ≥5.0 μg/g creatinine of ln-Fe (RR = 2.42, 95% CI: 0.46, 11.33). Our findings suggested that the seroprevalence of dengue IgG antibody in pregnant women was comparable to the general population in Guangzhou, China. The risk of DENV infection may be associated with maternal demographic characteristics and behaviors. Both maternal low and high Fe concentrations may be positively associated with the risk of DENV infection.
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Affiliation(s)
- Jiong Wang
- School of Public Health, Southern Medical University, Guangzhou, China.,Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Jiufeng Sun
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Limei Sun
- Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Yufeng Ye
- Guangzhou Panyu Central Hospital, Guangzhou, China
| | - Hanwei Chen
- Guangzhou Panyu Central Hospital, Guangzhou, China
| | - Jianpeng Xiao
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Guanhao He
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Jianxiong Hu
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Guimin Chen
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - He Zhou
- Guangdong Provincial Institute of Public Health, Guangdong Provincial Center for Disease Control and Prevention, Guangzhou, China
| | - Xiaomei Dong
- Department of Public Health and Preventive Medicine, School of Medicine, Jinan University, Guangzhou, China
| | - Wenjun Ma
- Department of Public Health and Preventive Medicine, School of Medicine, Jinan University, Guangzhou, China
| | - Bo Zhang
- Food Safety and Health Research Center, School of Public Health, Southern Medical University, Guangzhou, China
| | - Tao Liu
- Department of Public Health and Preventive Medicine, School of Medicine, Jinan University, Guangzhou, China.,School of Public Health, Southern Medical University, Guangzhou, China
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12
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Singh G, Soman B. Spatiotemporal epidemiology and forecasting of dengue in the state of Punjab, India: Study protocol. Spat Spatiotemporal Epidemiol 2021; 39:100444. [PMID: 34774263 DOI: 10.1016/j.sste.2021.100444] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/22/2021] [Revised: 07/02/2021] [Accepted: 07/21/2021] [Indexed: 11/30/2022]
Abstract
Dengue burden in India is a major public health problem. The present study has been designed to understand mechanisms by which routine data generate evidence. Secondary data analysis of routine datasets to understand spatiotemporal epidemiology and forecast dengue will be conducted. Data science approach will be adopted to generate a reproducible framework in the R environment. The lab-confirmed dengue reported by the state health authorities from 01 January 2015 to 31 December 2019 will be included. Multiple climatic variables from satellite imagery, climatic models, vegetation and built-up indices, and sociodemographic variables will be explored as risk factors. Exploratory data analysis followed by statistical analysis and machine learning will be performed. Data analysis will include geospatial information analysis, time series analysis, and spatiotemporal analysis. The study will provide value addition to the existing disease surveillance mechanisms by developing a framework for incorporating multiple routine data sources available in the country.
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Affiliation(s)
- Gurpreet Singh
- Achutha Menon Centre for Health Science Studies, Sree Chitra Tirunal Institute for Medical Sciences and Technology, Trivandrum, India
| | - Biju Soman
- Achutha Menon Centre for Health Science Studies, Sree Chitra Tirunal Institute for Medical Sciences and Technology, Trivandrum, India..
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13
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Gao P, Pilot E, Rehbock C, Gontariuk M, Doreleijers S, Wang L, Krafft T, Martens P, Liu Q. Land use and land cover change and its impacts on dengue dynamics in China: A systematic review. PLoS Negl Trop Dis 2021; 15:e0009879. [PMID: 34669704 PMCID: PMC8559955 DOI: 10.1371/journal.pntd.0009879] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 11/01/2021] [Accepted: 10/05/2021] [Indexed: 12/29/2022] Open
Abstract
Background Dengue is a prioritized public health concern in China. Because of the larger scale, more frequent and wider spatial distribution, the challenge for dengue prevention and control has increased in recent years. While land use and land cover (LULC) change was suggested to be associated with dengue, relevant research has been quite limited. The “Open Door” policy introduced in 1978 led to significant LULC change in China. This systematic review is the first to review the studies on the impacts of LULC change on dengue dynamics in China. This review aims at identifying the research evidence, research gaps and provide insights for future research. Methods A systematic literature review was conducted following the PRISMA protocol. The combinations of search terms on LULC, dengue and its vectors were searched in the databases PubMed, Web of Science, and Baidu Scholar. Research conducted on China published from 1978 to December 2019 and written in English or Chinese was selected for further screening. References listed in articles meeting the inclusion criteria were also reviewed and included if again inclusion criteria were met to minimize the probability of missing relevant research. Results 28 studies published between 1978 and 2017 were included for the full review. Guangdong Province and southern Taiwan were the major regional foci in the literature. The majority of the reviewed studies observed associations between LULC change factors and dengue incidence and distribution. Conflictive evidence was shown in the studies about the impacts of green space and blue space on dengue in China. Transportation infrastructure and urbanization were repeatedly suggested to be positively associated with dengue incidence and spread. The majority of the studies reviewed considered meteorological and sociodemographic factors when they analyzed the effects of LULC change on dengue. Primary and secondary remote sensing (RS) data were the primary source for LULC variables. In 21 of 28 studies, a geographic information system (GIS) was used to process data of environmental variables and dengue cases and to perform spatial analysis of dengue. Conclusions The effects of LULC change on the dynamics of dengue in China varied in different periods and regions. The application of RS and GIS enriches the means and dimensions to explore the relations between LULC change and dengue. Further comprehensive regional research is necessary to assess the influence of LULC change on local dengue transmission to provide practical advice for dengue prevention and control. Dengue is a major public health concern in China. The rapid development of urbanization along with climate change increases the challenge for dengue prevention and control. Previous research has mainly focused on the meteorological variables whereas land use and land cover (LULC) change received comparatively less attention. Our review identified that the regional research hotspots of dengue epidemics in China were Guangdong Province and southern Taiwan. Though inconsistent, most included studies somehow observed associations between at least one of the LULC change factors and dengue. A geographical information system (GIS) was widely used to perform spatial analysis in the selected literature. Its application provided a novel view to describe the relationships between environmental factors and the situation of dengue, which enabled scholars to explore more characteristics of dengue transmission. Meanwhile, the use of remote sensing (RS) enriched the means of environmental monitoring. However, there are research gaps in the area of dengue and LULC change, such as the less consideration of dengue vector study, the lack of interplays between factors, and the lack of considering interventions and policies. Furthermore, because of different research settings, results from these studies were difficult to compare. Thus, further comprehensive and comparable investigations are necessary to better understand the effects of LULC change on dengue in China. This review is the first to expound the studies on the associations between LULC change and dengue dynamics in China. It demonstrates the findings and methodologies and provided insights for future research.
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Affiliation(s)
- Panjun Gao
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Eva Pilot
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Cassandra Rehbock
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Marie Gontariuk
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Simone Doreleijers
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Li Wang
- Key Laboratory of Land Surface Pattern and Simulation, Institute of Geographical Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
| | - Thomas Krafft
- Department of Health, Ethics & Society, CAPHRI Care and Public Health Research Institute, Faculty of Health, Medicine and Life Sciences, Maastricht University, Maastricht, The Netherlands
| | - Pim Martens
- Maastricht Sustainability Institute (MSI), Maastricht University, Maastricht, The Netherlands
| | - Qiyong Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
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14
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Wu W, Ren H, Lu L. Increasingly expanded future risk of dengue fever in the Pearl River Delta, China. PLoS Negl Trop Dis 2021; 15:e0009745. [PMID: 34559817 PMCID: PMC8462684 DOI: 10.1371/journal.pntd.0009745] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2020] [Accepted: 08/18/2021] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND In recent years, frequent outbreaks of dengue fever (DF) have become an increasingly serious public health issue in China, especially in the Pearl River Delta (PRD) with fast socioeconomic developments. Previous studies mainly focused on the historic DF epidemics, their influencing factors, and the prediction of DF risks. However, the future risks of this disease under both different socioeconomic development and representative concentration pathways (RCPs) scenarios remain little understood. METHODOLOGY AND PRINCIPAL FINDINGS In this study, a spatial dataset of gross domestic product (GDP), population density, and land use and land coverage (LULC) in 2050 and 2070 was obtained by simulation based on the different shared socioeconomic pathways (SSPs), and the future climatic data derived from the RCP scenarios were integrated into the Maxent models for predicting the future DF risk in the PRD region. Among all the variables included in this study, socioeconomics factors made the dominant contribution (83% or so) during simulating the current spatial distribution of the DF epidemics in the PRD region. Moreover, the spatial distribution of future DF risk identified by the climatic and socioeconomic (C&S) variables models was more detailed than that of the climatic variables models. Along with global warming and socioeconomic development, the zones with DF high and moderate risk will continue to increase, and the population at high and moderate risk will reach a maximum of 48.47 million (i.e., 63.78% of the whole PRD) under the RCP 4.5/SSP2 in 2070. CONCLUSIONS The increasing DF risk may be an inevitable public health threat in the PRD region with rapid socioeconomic developments and global warming in the future. Our results suggest that curbs in emissions and more sustainable socioeconomic growth targets offer hope for limiting the future impact of dengue, and effective prevention and control need to continue to be strengthened at the junction of Guangzhou-Foshan, north-central Zhongshan city, and central-western Dongguan city. Our study provides useful clues for relevant hygienic authorities making targeted adapting strategies for this disease.
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Affiliation(s)
- Wei Wu
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- School of Geography and Ocean Science, Nanjing University, Nanjing, China
- Key Laboratory of Coastal zone Development and Protection, Ministry of Land and Resources of China, Nanjing, China
| | - Hongyan Ren
- State Key Laboratory of Resources and Environmental Information System, Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing, China
- * E-mail:
| | - Liang Lu
- State Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
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15
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The role of urbanisation in the spread of Aedes mosquitoes and the diseases they transmit-A systematic review. PLoS Negl Trop Dis 2021; 15:e0009631. [PMID: 34499653 PMCID: PMC8428665 DOI: 10.1371/journal.pntd.0009631] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022] Open
Abstract
Background This systematic review aims to assess how different urbanisation patterns related to rapid urban growth, unplanned expansion, and human population density affect the establishment and distribution of Aedes aegypti and Aedes albopictus and create favourable conditions for the spread of dengue, chikungunya, and Zika viruses. Methods and findings Following the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) guidelines, a systematic review was conducted using the PubMed, Virtual Health Library, Cochrane, WHO Library Database (WHOLIS), Google Scholar, and and the Institutional Repository for Information Sharing (IRIS) databases. From a total of 523 identified studies, 86 were selected for further analysis, and 29 were finally analysed after applying all inclusion and exclusion criteria. The main explanatory variables used to associate urbanisation with epidemiological/entomological outcomes were the following: human population density, urban growth, artificial geographical space, urban construction, and urban density. Associated with the lack of a global definition of urbanisation, several studies provided their own definitions, which represents one of the study’s limitations. Results were based on 8 ecological studies/models, 8 entomological surveillance studies, 7 epidemiological surveillance studies, and 6 studies consisting of spatial and predictive models. According to their focus, studies were categorised into 2 main subgroups, namely “Aedes ecology” and “transmission dynamics.” There was a consistent association between urbanisation and the distribution and density of Aedes mosquitoes in 14 of the studies and a strong relationship between vector abundance and disease transmission in 18 studies. Human population density of more than 1,000 inhabitants per square kilometer was associated with increased levels of arboviral diseases in 15 of the studies. Conclusions The use of different methods in the included studies highlights the interplay of multiple factors linking urbanisation with ecological, entomological, and epidemiological parameters and the need to consider a variety of these factors for designing effective public health approaches. The expansion of urbanisation is often associated with the emergence and spread of vector-borne diseases by creating favourable conditions for the survival of Aedes species and the spread of dengue, chikungunya, and Zika viruses. This systematic review examined the relationship of urbanisation to the emergence and spread of Aedes mosquito–borne diseases and epidemics. From a total of 523 identified studies, 29 were included in the analysis. Studies were categorised into 2 main subgroups, namely “Aedes ecology” and “transmission dynamics” according to the main influence factors posed by urbanisation. Selected articles showed a clear relationship of urbanisation with distribution and density of Aedes mosquitoes and a robust association between vector production, human population density, and disease transmission. Differing definitions of ’urbanisation’ and the interplay of numerous factors linking urbanisation with ecological, entomological, and epidemiological parameters highlight the need for a multidimensional perspective when assessing the impacts of rapid and unplanned urban expansion and when designing effective control programmes.
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16
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Liu X, Liu K, Yue Y, Wu H, Yang S, Guo Y, Ren D, Zhao N, Yang J, Liu Q. Determination of Factors Affecting Dengue Occurrence in Representative Areas of China: A Principal Component Regression Analysis. Front Public Health 2021; 8:603872. [PMID: 33537277 PMCID: PMC7848178 DOI: 10.3389/fpubh.2020.603872] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2020] [Accepted: 12/10/2020] [Indexed: 11/13/2022] Open
Abstract
Background: Determination of the key factors affecting dengue occurrence is of significant importance for the successful response to its outbreak. Yunnan and Guangdong Provinces in China are hotspots of dengue outbreak during recent years. However, few studies focused on the drive of multi-dimensional factors on dengue occurrence failing to consider the possible multicollinearity of the studied factors, which may bias the results. Methods: In this study, multiple linear regression analysis was utilized to explore the effect of multicollinearity among dengue occurrences and related natural and social factors. A principal component regression (PCR) analysis was utilized to determine the key dengue-driven factors in Guangzhou city of Guangdong Province and Xishuangbanna prefecture of Yunnan Province, respectively. Results: The effect of multicollinearity existed in both Guangzhou city and Xishuangbanna prefecture, respectively. PCR model revealed that the top three contributing factors to dengue occurrence in Guangzhou were Breteau Index (BI) (positive correlation), the number of imported dengue cases lagged by 1 month (positive correlation), and monthly average of maximum temperature lagged by 1 month (negative correlation). In contrast, the top three factors contributing to dengue occurrence in Xishuangbanna included monthly average of minimum temperature lagged by 1 month (positive correlation), monthly average of maximum temperature (positive correlation), monthly average of relative humidity (positive correlation), respectively. Conclusion: Meteorological factors presented stronger impacts on dengue occurrence in Xishuangbanna, Yunnan, while BI and the number of imported cases lagged by 1 month played important roles on dengue transmission in Guangzhou, Guangdong. Our findings could help to facilitate the formulation of tailored dengue response mechanism in representative areas of China in the future.
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Affiliation(s)
- Xiaobo Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Keke Liu
- Provincial Hospital Affiliated to Shandong First Medical University, Jinan, China
| | - Yujuan Yue
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Haixia Wu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Shu Yang
- The Collaboration Unit for Field Epidemiology of State Key Laboratory of Infectious Disease Prevention and Control, Nanchang Center for Disease Control and Prevention, Nanchang, China
| | - Yuhong Guo
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Dongsheng Ren
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Ning Zhao
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
| | - Jun Yang
- Institute for Environmental and Climate Research, Jinan University, Guangzhou, China
| | - Qiyong Liu
- State Key Laboratory of Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, WHO Collaborating Centre for Vector Surveillance and Management, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
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17
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Chen Y, Yang Z, Jing Q, Huang J, Guo C, Yang K, Chen A, Lu J. Effects of natural and socioeconomic factors on dengue transmission in two cities of China from 2006 to 2017. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 724:138200. [PMID: 32408449 DOI: 10.1016/j.scitotenv.2020.138200] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/31/2019] [Revised: 03/23/2020] [Accepted: 03/23/2020] [Indexed: 06/11/2023]
Abstract
Dengue fever (DF) is a common and rapidly spreading vector-borne viral disease in tropical and subtropical regions. In recent years, in China, DF still poses an increasing threat to public health in many cities; but the incidence shows significant spatiotemporal differences. The purpose of this study was to identify the key factors affecting the spatial and temporal distribution of DF. We collected natural environmental and socio-economic data for two adjacent cities, Guangzhou (73 variables) and Foshan (71 variables), with the most DF cases in China. We performed random forest modelling to rank the factors according to their level of importance, and used negative binomial regression analysis to compare the risk factors between outbreak years and non-outbreak years. The natural environmental factors contributing to DF incidence for Guangzhou were temperature (relative risk (RR) = 18.80, 95% confidence interval (CI) = 3.11-113.67), humidity (RR = 1.85, 95% CI = 1.17-2.90) and green area (RR = 12.11, 95% CI = 6.14-55.50), and for Foshan was forest coverage (RR = 5.83, 95% CI = 2.72-12.45). Socio-economic impact were shown in Guangzhou with foreign visitor (RR = 1.18, 95% CI = 1.05-1.34) and oversea air passenger transport (RR = 7.34, 95% CI = 2.26-23.86); in Foshan, with oversea tourism (RR = 1.65, 95% CI = 1.34-2.04); and in Guangzhou-Foshan, with the development of intercity metro (RR = 1.26, 95% CI = 1.10-1.44). The difference between the two cities was the greater impact of the foreign visitor, green spaces and climate factor on DF in Guangzhou; the impact of the construction of intercity metro; and the more significant impact of oversea tourism on DF in Foshan. Our results suggest meaningful clues to public health authorities implementing joint interventions on DF prevention and early warning, to increase health education on DF prevention for international visitors and oversea travelers, and cross-city metro passengers; using rapid body temperature detection in public places such as airports, metros and parks can help detect cases early.
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Affiliation(s)
- Ying Chen
- Department of Medical Statistics and Epidemiology, School of Public Health, Sun Yat-sen University, People's Republic of China
| | - Zefeng Yang
- Department of Infectious Diseases, Foshan Center for Disease Control and Prevention, People's Republic of China
| | - Qinlong Jing
- Department of Infectious Diseases, Guangzhou Center for Disease Control and Prevention, People's Republic of China
| | - Jiayin Huang
- Department of Infectious Diseases, Foshan Center for Disease Control and Prevention, People's Republic of China
| | - Cheng Guo
- Center for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, United States of America
| | - Kailiang Yang
- Department of Infectious Diseases, Foshan Center for Disease Control and Prevention, People's Republic of China
| | - Aizhen Chen
- Department of Infectious Diseases, Foshan Center for Disease Control and Prevention, People's Republic of China.
| | - Jiahai Lu
- Department of Medical Statistics and Epidemiology, School of Public Health, Sun Yat-sen University, People's Republic of China.
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Li Z, Gurgel H, Dessay N, Hu L, Xu L, Gong P. Semi-Supervised Text Classification Framework: An Overview of Dengue Landscape Factors and Satellite Earth Observation. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:E4509. [PMID: 32585932 PMCID: PMC7344967 DOI: 10.3390/ijerph17124509] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 06/17/2020] [Accepted: 06/18/2020] [Indexed: 12/29/2022]
Abstract
In recent years there has been an increasing use of satellite Earth observation (EO) data in dengue research, in particular the identification of landscape factors affecting dengue transmission. Summarizing landscape factors and satellite EO data sources, and making the information public are helpful for guiding future research and improving health decision-making. In this case, a review of the literature would appear to be an appropriate tool. However, this is not an easy-to-use tool. The review process mainly includes defining the topic, searching, screening at both title/abstract and full-text levels and data extraction that needs consistent knowledge from experts and is time-consuming and labor intensive. In this context, this study integrates the review process, text scoring, active learning (AL) mechanism, and bidirectional long short-term memory (BiLSTM) networks, and proposes a semi-supervised text classification framework that enables the efficient and accurate selection of the relevant articles. Specifically, text scoring and BiLSTM-based active learning were used to replace the title/abstract screening and full-text screening, respectively, which greatly reduces the human workload. In this study, 101 relevant articles were selected from 4 bibliographic databases, and a catalogue of essential dengue landscape factors was identified and divided into four categories: land use (LU), land cover (LC), topography and continuous land surface features. Moreover, various satellite EO sensors and products used for identifying landscape factors were tabulated. Finally, possible future directions of applying satellite EO data in dengue research in terms of landscape patterns, satellite sensors and deep learning were proposed. The proposed semi-supervised text classification framework was successfully applied in research evidence synthesis that could be easily applied to other topics, particularly in an interdisciplinary context.
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Affiliation(s)
- Zhichao Li
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Helen Gurgel
- Department of Geography, University of Brasilia (UnB), Brasilia CEP 70910-900, Brazil;
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
| | - Nadine Dessay
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
- IRD, UM, UR, UG, UA, UMR ESPACE-DEV, 34090 Montpellier, France
| | - Luojia Hu
- Qian Xuesen Laboratory of Space Technology, China Academy of Space Technology, Beijing 100094, China;
| | - Lei Xu
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Peng Gong
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
- Center for Healthy Cities, Institute for China Sustainable Urbanization, Tsinghua University, Beijing 100084, China
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19
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Chen X, Wu T, Liang J, Zhou L. Urban mosquito management administration: Mosquito (Diptera: Culicidae) habitat surveillance and questionnaire survey in Wuhan, Central China. PLoS One 2020; 15:e0232286. [PMID: 32369525 PMCID: PMC7199959 DOI: 10.1371/journal.pone.0232286] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2019] [Accepted: 04/10/2020] [Indexed: 11/18/2022] Open
Abstract
BACKGROUND Creating National Sanitary City (CNSC) promotes appearance, environment sanitation and public health including vector management of cities in China. However, vector management especially mosquito management and the related administrative productivity of Patriotic Health Campaign System (PHCS) of National Sanitary Cities (NSCs) were questioned by many pest control professionals and citizens. In this study, we studied mosquito management of NSCs taking Wuhan as an example. The study aimed to (1) determine the distribution and abundance of immature mosquito habitats in built-up areas of Wuhan and (2) better understand the related administration procedure in CNSC. METHODS Immature mosquito habitat surveillance was carried out in randomly selected premises of driving schools (DSs), schools or kindergartens (SKs), property management residential areas (PMRAs), construction sites (CSs), wide roads with storm drains (WRSDs) and urban creeks (UCs) in built-up areas of Wuhan from July to October 2015 followed by questionnaire interviews with one each of premise occupants and district departments responsible for mosquito management in these premises. RESULTS Total of 64.1 km of route were inspected in 36 DSs, 36 SKs, 36 PMRAs, 36 CSs and 36 segments of WRSD and 2,158 potential mosquito habitats with 749 (35%) mosquito-positive habitats were found. The route index (RI) was 11.7, which was 14.6 times higher than the grade C criteria for vector density control (RI = 0.8 positive habitats/km) in CNSC. Occupants of 36 DSs, 36 SKs, 36 PMRAs, 34 CSs were interviewed and 77% of them reported no difference in mosquito infestation in their premises since 2013 and 80% of them knew about the responsibility and arrangements of PHCS of mosquito management in their premises. Only 15% had the awareness of larval source reduction strategy and 14% had implemented it. Receipt the electronic/paper edition of CNSC vector management specifications from the PHCS was very low (13%) and an official notification or bulletin for rectification mosquito-positive habitats was also very low (5%). Of the 75 responsible district departments interviewed, about half (55%) reported that they had held training courses/meetings related to CNSC vector management, the majority (96%) reported that they had not carried out independent on-site supervision of premises under their jurisdiction. No differences in larval indices were found between premises which were administrative intervened and with no administrative intervention. CONCLUSIONS The administrative intervention of PHCS had not evidently improved mosquito management of the premises in built-up areas in Wuhan. It is a violation of the original intention of the National Patriotic Health Campaign Committee in organizing CNSC programs. To combat mosquito borne diseases, and to improve the quality of life of residents, we recommend that PHCS honestly reveals defects in urban mosquito management and seriously takes those exposed defects. The PHCS should strengthen Patriotic Health Campaign activities by strict adherence to NSC standards. Further research on sustained promotion of urban mosquito management of NSCs, which focus on effective administration, as well as on improvement of related sectors of NSC standards should be carried out.
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Affiliation(s)
- Xiaomin Chen
- Disinfection and Vector Control Section, Wuhan Centers for Disease Prevention & Control, Wuhan, Hubei Province, People's Republic of China
| | - Taiping Wu
- Disinfection and Vector Control Section, Wuhan Centers for Disease Prevention & Control, Wuhan, Hubei Province, People's Republic of China
| | - Jiansheng Liang
- Disinfection and Vector Control Section, Wuhan Centers for Disease Prevention & Control, Wuhan, Hubei Province, People's Republic of China
| | - Liangcai Zhou
- Disinfection and Vector Control Section, Wuhan Centers for Disease Prevention & Control, Wuhan, Hubei Province, People's Republic of China
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The driver of dengue fever incidence in two high-risk areas of China: A comparative study. Sci Rep 2019; 9:19510. [PMID: 31862993 PMCID: PMC6925307 DOI: 10.1038/s41598-019-56112-8] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2019] [Accepted: 12/06/2019] [Indexed: 11/24/2022] Open
Abstract
In China, the knowledge of the underlying causes of heterogeneous distribution pattern of dengue fever in different high-risk areas is limited. A comparative study will help us understand the influencing factors of dengue in different high-risk areas. In the study, we compared the effects of climate, mosquito density and imported cases on dengue fever in two high-risk areas using Generalized Additive Model (GAM), random forests and Structural Equation Model (SEM). GAM analysis identified a similar positive correlation between imported cases, density of Aedes larvae, climate variables and dengue fever occurrence in the studied high-risk areas of both Guangdong and Yunnan provinces. Random forests showed that the most important factors affecting dengue fever occurrence were the number of imported cases, BI and the monthly average minimum temperature in Guangdong province; whereas the imported cases, the monthly average temperature and monthly relative humidity in Yunnan province. We found the rainfall had the indirect effect on dengue fever occurrence in both areas mediated by mosquito density; while the direct effect in high-risk areas of Guangdong was dominated by temperature and no obvious effect in Yunnan province by SEM. In total, climate factors and mosquito density are the key drivers on dengue fever incidence in different high-risk areas of China. These findings could provide scientific evidence for early warning and the scientific control of dengue fever in high-risk areas.
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