Temporal structure of the peritrich ciliate assemblage in a large Neotropical lake

Structure and Dynamics of Periphyton in a Neotropical Freshwater Lake, with Emphasis on Ciliates and Their Relationships with Bacterial Taxa

Periphyton communities in freshwater systems play an essential role in biogeochemical processes, but knowledge of their structure and dynamics lags far behind other environments. We used eDNA metabarcoding of 16S and 18S rRNA markers to investigate the formation and establishment of a periphytic community, in addition to a morphology-based approach for peritrich ciliate determinations, its most abundant group. We sampled two nearby sites within a large Neotropical lake at four time points, aiming to assess whether periphyton establishment can be replicated on this local scale. Producers and denitrifiers were abundant in the community, illustrating the relevant role of biofilms in freshwater nutrient recycling. Among microeukaryotes, peritrich ciliates dominated the community, with genera Epistylis and Vorticella being the most abundant and showing a clear succession at both sites. Other ciliates were morphologically identified and, in some cases, their occurrence was strongly related to bacterial abundance. The structure of both prokaryotic and eukaryotic components of periphyton was not different, while the turnover dynamics differed between the two sites, in spite of their adjacent locations and similar abiotic properties. This indicates that the establishment of these communities can vary even on a local scale within a lake ecosystem.

Periphytic Ciliate Communities in Lake Ecosystem of Temperate Riverine Floodplain: Variability in Taxonomic and Functional Composition and Diversity with Seasons and Hydrological Changes

Periphytic ciliate communities of riverine floodplains have hardly been studied, although they play an important role in aquatic food webs and contribute to the overall ecosystem functioning. In this study we analyzed the taxonomic and functional composition and diversity of these communities across all seasons and hydrological phases. The study was conducted in a floodplain lake, a part of the large natural Danube floodplain, from February 2015 to September 2016. We found that higher temperature and hydrologically stable conditions during the lake isolation phase, when a high amount of suspended food is available, result in the highest ciliate abundances and dominance of relatively large suspension-feeding ciliates, mainly peritrichs, which could serve as good bioindicators for detecting disturbances in river-floodplain ecosystems. During the flow pulse phase, associated with lower temperatures, and during the phase of extreme floods, when the availability of suspended food was largely reduced, small surface-feeding ciliates prevailed in the periphyton. Further, while the total ciliate abundance was the lowest, the highest taxonomic and functional diversity was found, especially during an intermediate level of hydrological connectivity (flow pulse). Our results confirm the importance of different levels of hydrological connectivity for maintaining biodiversity in riverine floodplains and add to a growing awareness of the need to preserve the natural hydrological regimes of large rivers.