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Draft Genome Sequences of Seven
Limosilactobacillus fermentum
Indigenously Isolated Probiotic Strains from the Artisanal Fermented Milk Product Dahi. Microbiol Resour Announc 2022; 11:e0074222. [PMID: 36214690 PMCID: PMC9670941 DOI: 10.1128/mra.00742-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
Here, we report the draft genome sequences of seven strains of potentially probiotic Limosilactobacillus fermentum isolated from the traditional fermented milk product dahi. The estimated average genome size was 1,955,815 bp, with a median GC content of 52%. Genome annotation predicted an average of 1,871 protein-coding genes and 47 RNAs.
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Draft Genome Sequence of Limosilactobacillus fermentum Strain NKN-51, Isolated from Fermented Yak Milk in the Western Himalayas of India. Microbiol Resour Announc 2021; 10:10/16/e00186-21. [PMID: 33888502 PMCID: PMC8063645 DOI: 10.1128/mra.00186-21] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Here, we report the draft genome sequence of Limosilactobacillus fermentum strain NKN-51, which was isolated from naturally processed yak cheese from the western Himalayas of India. The genome was assembled in 101 contigs with a total length of 1,879,705 bp and a GC content of 53.5%. Genome annotation predicted 1,730 protein-coding genes and 50 tRNA genes. Here, we report the draft genome sequence of Limosilactobacillus fermentum strain NKN-51, which was isolated from naturally processed yak cheese from the western Himalayas of India. The genome was assembled in 101 contigs with a total length of 1,879,705 bp and a GC content of 53.5%. Genome annotation predicted 1,730 protein-coding genes and 50 tRNA genes.
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Draft Genome Sequence of a Lactobacillus fermentum Strain Isolated from Domestic Sewage in Kerala, India. Microbiol Resour Announc 2020; 9:9/29/e00713-20. [PMID: 32675192 PMCID: PMC7365803 DOI: 10.1128/mra.00713-20] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
We report the draft genome sequence of a putative probiotic strain, Lactobacillus fermentum ASBT-2, isolated from domestic sewage in Kerala, India. The strain showed probiotic properties (tolerance to low pH and bile salts, binding to host matrix) and reduced the coliform count by 90% in a biofilter used to treat wastewater. We report the draft genome sequence of a putative probiotic strain, Lactobacillus fermentum ASBT-2, isolated from domestic sewage in Kerala, India. The strain showed probiotic properties (tolerance to low pH and bile salts, binding to host matrix) and reduced the coliform count by 90% in a biofilter used to treat wastewater.
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Guilbaud A, Howsam M, Niquet-Léridon C, Delguste F, Fremont M, Lestavel S, Maboudou P, Garat A, Schraen S, Onraed B, Foligné B, Boulanger É, Tessier FJ. The Effect of Lactobacillus fermentum ME-3 Treatment on Glycation and Diabetes Complications. Mol Nutr Food Res 2020; 64:e1901018. [PMID: 31991062 DOI: 10.1002/mnfr.201901018] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2019] [Revised: 12/06/2019] [Indexed: 12/22/2022]
Abstract
SCOPE Type 2 diabetes (T2D) induces organ damage associated with glycation, among other metabolic pathways. While therapeutic strategies have been tested to reduce the formation and impact of glycation products, results remain equivocal. Anti-diabetic therapies using probiotics have been proposed, but their effect upon glycation has not been reported. Here, the effects of the bacterial strain Lactobacillus fermentum ME-3 on glycation and T2D-related complications in a mouse model of T2D are investigated. METHODS & RESULTS Wild-type LepRdb/+ and diabetic LepRdb/db littermates receive a daily gavage of either water or the probiotic ME-3 strain (1010 CFU). Glycation markers, fructoselysine-derived furosine (FL-furosine) and carboxymethyllysine (CML), are quantified in four major organs and plasma using stable-isotope dilution LC-MS/MS. After 12 weeks of ME-3 treatment, diabetic mice gain less weight and exhibit an apparently improved glucose tolerance. The ME-3 treatment reduces median renal levels of FL-furosine in both genotypes by 12-15%, and renal and pulmonary free-CML in diabetic mice by 30% and 18%, respectively. Attenuated hepatic steatosis and an improved plasma lipid profile are also observed with treatment in both genotypes, while the gut microbiota profile is unchanged. CONCLUSION L. fermentum ME-3 has therapeutic potential for reducing the formation/accumulation of some glycation products in kidneys and attenuating some common diabetes-related complications.
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Affiliation(s)
- Axel Guilbaud
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1167 - RID-AGE, F-59000, Lille, France.,VF Bioscience SAS, Parc Eurasanté, 310 rue Jules Vallès, 59120, Loos-lez-Lille, France.,Francophone Maillard Reaction Society (FMaRS), Lille, France
| | - Michael Howsam
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1167 - RID-AGE, F-59000, Lille, France.,Francophone Maillard Reaction Society (FMaRS), Lille, France
| | - Céline Niquet-Léridon
- Francophone Maillard Reaction Society (FMaRS), Lille, France.,Transformations & Agro-ressources Unit, Institut Polytechnique UniLaSalle, 19 rue Pierre Waguet, 60000, Beauvais, France
| | - Florian Delguste
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1167 - RID-AGE, F-59000, Lille, France
| | - Marc Fremont
- VF Bioscience SAS, Parc Eurasanté, 310 rue Jules Vallès, 59120, Loos-lez-Lille, France
| | - Sophie Lestavel
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1011 - EGID, F-59000, Lille, France
| | - Patrice Maboudou
- Laboratory of Biochemistry, Centre de Biologie-Pathologie Pierre-Marie Degand, CHRU Lille, bd. du professeur Leclercq, 59037, Lille Cedex
| | - Anne Garat
- Univ. Lille, CHU Lille, Pasteur Institute of Lille, EA 4483 - IMPECS, F-59000, Lille, France
| | - Susanna Schraen
- Laboratory of Biochemistry, Centre de Biologie-Pathologie Pierre-Marie Degand, CHRU Lille, bd. du professeur Leclercq, 59037, Lille Cedex
| | - Brigitte Onraed
- Laboratory of Biochemistry, Centre de Biologie-Pathologie Pierre-Marie Degand, CHRU Lille, bd. du professeur Leclercq, 59037, Lille Cedex
| | - Benoît Foligné
- Univ. Lille, Inserm, CHU Lille, U1286 - INFINITE, F-59000, Lille, France
| | - Éric Boulanger
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1167 - RID-AGE, F-59000, Lille, France.,Francophone Maillard Reaction Society (FMaRS), Lille, France
| | - Frédéric J Tessier
- Univ. Lille, Inserm, CHU Lille, Pasteur Institute of Lille, U1167 - RID-AGE, F-59000, Lille, France.,Francophone Maillard Reaction Society (FMaRS), Lille, France
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Kullisaar T, Zilmer K, Salum T, Rehema A, Zilmer M. The use of probiotic L. fermentum ME-3 containing Reg'Activ Cholesterol supplement for 4 weeks has a positive influence on blood lipoprotein profiles and inflammatory cytokines: an open-label preliminary study. Nutr J 2016; 15:93. [PMID: 27793203 PMCID: PMC5084312 DOI: 10.1186/s12937-016-0213-6] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/19/2016] [Accepted: 10/19/2016] [Indexed: 01/12/2023] Open
Abstract
BACKGROUND Cardiovascular diseases continue to be a challenge and burden to heath. The incidence of type 2 diabetes is increasing. Modifying the (common) risk factors of them is the key of longterm success. The aim of the study was to establish if the special composition of innovative food supplement Reg'Activ Cholesterol (RAC) has a positive influence to the human body cardiovascular-inflammatory and diabetic parameters. METHODS Forty-five clinically asymptomatic participants consumed an RAC containing an antioxidative and antiatherogenic probiotic Lactobacillus fermentum ME-3 (LFME-3) for 4 weeks. The parameters measured were total cholesterol, HDL cholesterol, LDL cholesterol, triglyceride, oxLDL, hsCRP, IL-6 and glycosylated haemoglobin (HbA1c%). RESULTS The cardiovascular and diabetes risk profile of the participants improved significantly after 4 weeks of the intervention. The reduction of total cholesterol (from 6.5 ± 1.0 to 5.7 ± 0.9 mmol/l, p = 9.90806E-11) was on the account of LDL cholesterol as the HDL cholesterol level rose from 1.60 ± 0.31to 1.67 ± 0.34mml/l, p = 0.01. HbA1c% was reduced from 5.85 ± 0.28 to 5.66 ± 0.25 p = 4.64E-05 and oxLDL decreased from 84 ± 20 to 71 ± 15 U/l, p = 4.66292E-08. CONCLUSIONS The consumption of RAC in clinically asymptomatic volunteers with borderline-high values of risk factors for cardiovascular disease (BMI, HbA1c%, LDL cholesterol) for 4 weeks had a positive effect on blood lipoprotein, oxidative stress and inflammatory profile. There are no human trials published before with RAC. TRIAL REGISTRATION The trial described here isa n open label pilot study within the framework of a larger special clinical trial ( ISRCTN55339917 ) [Accessed 20 Feb 2016].
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Affiliation(s)
- Tiiu Kullisaar
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, The Centre of Excellence for Genomics and Translational Medicine, Faculty of Medicine, University of Tartu, Ravila 19, Tartu, 50411 Estonia
| | - Kersti Zilmer
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, The Centre of Excellence for Genomics and Translational Medicine, Faculty of Medicine, University of Tartu, Ravila 19, Tartu, 50411 Estonia
| | - Tiit Salum
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, The Centre of Excellence for Genomics and Translational Medicine, Faculty of Medicine, University of Tartu, Ravila 19, Tartu, 50411 Estonia
| | - Aune Rehema
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, The Centre of Excellence for Genomics and Translational Medicine, Faculty of Medicine, University of Tartu, Ravila 19, Tartu, 50411 Estonia
| | - Mihkel Zilmer
- Department of Biochemistry, Institute of Biomedicine and Translational Medicine, The Centre of Excellence for Genomics and Translational Medicine, Faculty of Medicine, University of Tartu, Ravila 19, Tartu, 50411 Estonia
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