Reich BJ, Storlie CB, Bondell HD. Variable selection in Bayesian smoothing spline ANOVA models: Application to deterministic computer codes.
Technometrics 2009;
51:110-120. [PMID:
19789732 DOI:
10.1198/tech.2009.0013]
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Abstract
With many predictors, choosing an appropriate subset of the covariates is a crucial, and difficult, step in nonparametric regression. We propose a Bayesian nonparametric regression model for curve-fitting and variable selection. We use the smoothing spline ANOVA framework to decompose the regression function into interpretable main effect and interaction functions. Stochastic search variable selection via MCMC sampling is used to search for models that fit the data well. Also, we show that variable selection is highly-sensitive to hyperparameter choice and develop a technique to select hyperparameters that control the long-run false positive rate. The method is used to build an emulator for a complex computer model for two-phase fluid flow.
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