1
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Ying Z, Zhang H, Wang L, Melnik R. A two-dimensional hydrodynamics prediction framework for mantle-undulated propulsion robot using multiple proper orthogonal decomposition and long short term memory neural network. BIOINSPIRATION & BIOMIMETICS 2023; 19:016005. [PMID: 37976535 DOI: 10.1088/1748-3190/ad0daf] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Accepted: 11/17/2023] [Indexed: 11/19/2023]
Abstract
In this paper, a deep learning based framework has been developed to predict hydrodynamic forces on a mantle-undulated propulsion robot (MUPRo). A multiple proper orthogonal decomposition (MPOD) algorithm has been proposed to efficiently identify fluid features near the undulating mantle of the MUPRo globally and locally. The results indicate that theL2error of the solution states near the undulating boundary of the proposed MPOD algorithm converges almost linearly to 0.2%. Furthermore, a hydrodynamics prediction framework has been developed based on the proposed MPOD algorithm, where a long short-term memory neural network predicts the temporal coefficients of the MPOD spatial modes. The developed framework achieves economical and reliable predictions of hydrodynamic forces acting on the undulating boundary compared to simulations and experiments. Moreover, theL2error of the developed framework is one to two orders of magnitude lower than that of the frameworks based on the classical POD algorithm when the degrees of freedom are consistent. Finally, the reliability of the proposed MPOD-NIROM is discussed through an offline parameter planning case of an aquatic-inspired robot. The model presented in this paper can provide support for the offline parameter planning of aquatic-inspired robots.
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Affiliation(s)
- Zixiang Ying
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Haozhi Zhang
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Linxiang Wang
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Roderick Melnik
- MS2Discovery Interdisciplinary Research Institute, Wilfrid Laurier University, Waterloo N2L 3L5, ON, Canada
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2
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Ferčák O, Lyons KM, Murphy CT, Kamensky KM, Cal RB, Franck JA. Multicolor dye-based flow structure visualization for seal-whisker geometry characterized by computer vision. BIOINSPIRATION & BIOMIMETICS 2023; 19:016004. [PMID: 37939394 DOI: 10.1088/1748-3190/ad0aa8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Accepted: 11/08/2023] [Indexed: 11/10/2023]
Abstract
Pinniped vibrissae possess a unique and complex three-dimensional topography, which has beneficial fluid flow characteristics such as substantial reductions in drag, lift, and vortex induced vibration. To understand and leverage these effects, the downstream vortex dynamics must be studied. Dye visualization is a traditional qualitative method of capturing these downstream effects, specifically in comparative biological investigations where complex equipment can be prohibitive. High-fidelity numerical simulations or experimental particle image velocimetry are commonplace for quantitative high-resolution flow measurements, but are computationally expensive, require costly equipment, and can have limited measurement windows. This study establishes a method for extracting quantitative data from standard dye visualization experiments on seal whisker geometries by leveraging novel but intuitive computer vision techniques, which maintain simplicity and an advantageous large experimental viewing window while automating the extraction of vortex frequency, position, and advection. Results are compared to direct numerical simulation (DNS) data for comparable geometries. Power spectra and Strouhal numbers show consistent behavior between methods for a Reynolds number of 500, with minima at the canonical geometry wavelength of 3.43 and a peak frequency of 0.2 for a Reynolds number of 250. The vortex tracking reveals a clear increase in velocity from roll-up to 3.5 whisker diameters downstream, with a strong overlap with the DNS data but shows steady results beyond the limited DNS window. This investigation provides insight into a valuable bio-inspired engineering model while advancing an analytical methodology that can readily be applied to a broad range of comparative biological studies.
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Affiliation(s)
- Ondřej Ferčák
- Department of Mechanical & Materials Engineering, Portland State University, Portland, OR, United States of America
| | - Kathleen M Lyons
- Department of Engineering Physics, University of Wisconsin-Madison, Madison, WI, United States of America
| | - Christin T Murphy
- Naval Undersea Warfare Center Division Newport, Newport, RI, United States of America
| | - Kristina M Kamensky
- Naval Undersea Warfare Center Division Newport, Newport, RI, United States of America
| | - Raúl Bayoán Cal
- Department of Mechanical & Materials Engineering, Portland State University, Portland, OR, United States of America
| | - Jennifer A Franck
- Department of Engineering Physics, University of Wisconsin-Madison, Madison, WI, United States of America
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3
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Gengel E, Kuplik Z, Angel D, Heifetz E. A physics-based model of swarming jellyfish. PLoS One 2023; 18:e0288378. [PMID: 37428796 DOI: 10.1371/journal.pone.0288378] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Accepted: 06/23/2023] [Indexed: 07/12/2023] Open
Abstract
We propose a model for the structure formation of jellyfish swimming based on active Brownian particles. We address the phenomena of counter-current swimming, avoidance of turbulent flow regions and foraging. We motivate corresponding mechanisms from observations of jellyfish swarming reported in the literature and incorporate them into the generic modelling framework. The model characteristics is tested in three paradigmatic flow environments.
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Affiliation(s)
- Erik Gengel
- Department of Geophysics, Porter School of the Environment and Earth Sciences, Tel Aviv University, Tel Aviv, Israel
| | - Zafrir Kuplik
- The Steinhardt Museum of Natural History, Tel Aviv University, Tel Aviv, Israel
- The Leon Recanati Institute for Maritime Studies, University of Haifa, Mount Carmel, Haifa, Israel
| | - Dror Angel
- The Leon Recanati Institute for Maritime Studies, University of Haifa, Mount Carmel, Haifa, Israel
| | - Eyal Heifetz
- Department of Geophysics, Porter School of the Environment and Earth Sciences, Tel Aviv University, Tel Aviv, Israel
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4
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Matharu PS, Gong P, Guntaka KPR, Almubarak Y, Jin Y, Tadesse YT. Jelly-Z: swimming performance and analysis of twisted and coiled polymer (TCP) actuated jellyfish soft robot. Sci Rep 2023; 13:11086. [PMID: 37422482 PMCID: PMC10329702 DOI: 10.1038/s41598-023-37611-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2022] [Accepted: 06/24/2023] [Indexed: 07/10/2023] Open
Abstract
Monitoring, sensing, and exploration of over 70% of the Earth's surface that is covered with water is permitted through the deployment of underwater bioinspired robots without affecting the natural habitat. To create a soft robot actuated with soft polymeric actuators, this paper describes the development of a lightweight jellyfish-inspired swimming robot, which achieves a maximum vertical swimming speed of 7.3 mm/s (0.05 body length/s) and is characterized by a simple design. The robot, named Jelly-Z, utilizes a contraction-expansion mechanism for swimming similar to the motion of a Moon jellyfish. The objective of this paper is to understand the behavior of soft silicone structure actuated by novel self-coiled polymer muscles in an underwater environment by varying stimuli and investigate the associated vortex for swimming like a jellyfish. To better understand the characteristics of this motion, simplified Fluid-structure simulation, and particle image velocimetry (PIV) tests were conducted to study the wake structure from the robot's bell margin. The thrust generated by the robot was also characterized with a force sensor to ascertain the force and cost of transport (COT) at different input currents. Jelly-Z is the first robot that utilized twisted and coiled polymer fishing line (TCPFL) actuators for articulation of the bell and showed successful swimming operations. Here, a thorough investigation on swimming characteristics in an underwater setting is presented theoretically and experimentally. We found swimming metrics of the robot are comparable with other jellyfish-inspired robots that have utilized different actuation mechanisms, but the actuators used here are scalable and can be made in-house relatively easily, hence paving way for further advancements into the use of these actuators.
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Affiliation(s)
- Pawandeep Singh Matharu
- Humanoid, Biorobotics and Smart Systems Laboratory (HBS Lab), Erik Jonsson School of Engineering and Computer Science, The University of Texas at Dallas, Richardson, TX, 75080, USA
| | - Pengyao Gong
- Fluids, Turbulence Control and Renewable Energy Laboratory, Department of Mechanical Engineering, The University of Texas at Dallas, Richardson, TX, 75080, USA
| | - Koti Pramod Reddy Guntaka
- SoRobotics Laboratory, Department of Mechanical Engineering, Wayne State University, Detroit, MI, 48202, USA
| | - Yara Almubarak
- SoRobotics Laboratory, Department of Mechanical Engineering, Wayne State University, Detroit, MI, 48202, USA
| | - Yaqing Jin
- Fluids, Turbulence Control and Renewable Energy Laboratory, Department of Mechanical Engineering, The University of Texas at Dallas, Richardson, TX, 75080, USA
| | - Yonas T Tadesse
- Humanoid, Biorobotics and Smart Systems Laboratory (HBS Lab), Erik Jonsson School of Engineering and Computer Science, The University of Texas at Dallas, Richardson, TX, 75080, USA.
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5
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von Montfort GM, Costello JH, Colin SP, Morandini AC, Migotto AE, Maronna MM, Reginato M, Miyake H, Nagata RM. Ontogenetic transitions, biomechanical trade-offs and macroevolution of scyphozoan medusae swimming patterns. Sci Rep 2023; 13:9760. [PMID: 37328506 PMCID: PMC10276012 DOI: 10.1038/s41598-023-34927-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2022] [Accepted: 05/10/2023] [Indexed: 06/18/2023] Open
Abstract
Ephyrae, the early stages of scyphozoan jellyfish, possess a conserved morphology among species. However, ontogenetic transitions lead to morphologically different shapes among scyphozoan lineages, with important consequences for swimming biomechanics, bioenergetics and ecology. We used high-speed imaging to analyse biomechanical and kinematic variables of swimming in 17 species of Scyphozoa (1 Coronatae, 8 "Semaeostomeae" and 8 Rhizostomeae) at different developmental stages. Swimming kinematics of early ephyrae were similar, in general, but differences related to major lineages emerged through development. Rhizostomeae medusae have more prolate bells, shorter pulse cycles and higher swimming performances. Medusae of "Semaeostomeae", in turn, have more variable bell shapes and most species had lower swimming performances. Despite these differences, both groups travelled the same distance per pulse suggesting that each pulse is hydrodynamically similar. Therefore, higher swimming velocities are achieved in species with higher pulsation frequencies. Our results suggest that medusae of Rhizostomeae and "Semaeostomeae" have evolved bell kinematics with different optimized traits, rhizostomes optimize rapid fluid processing, through faster pulsations, while "semaeostomes" optimize swimming efficiency, through longer interpulse intervals that enhance mechanisms of passive energy recapture.
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Affiliation(s)
- Guilherme M von Montfort
- Instituto de Oceanografia, Universidade Federal do Rio Grande, Av. Itália, km 8, Rio Grande, RS, 96203-000, Brazil.
| | - John H Costello
- Whitman Center, Marine Biological Laboratory, Biology Department, Providence College, Woods Hole, MA, 02543, USA
- Biology Department, Providence College, Providence, RI 02918, USA
| | - Sean P Colin
- Whitman Center, Marine Biological Laboratory, Biology Department, Providence College, Woods Hole, MA, 02543, USA
- Marine Biology and Environmental Science, Roger Williams University, Bristol, RI, 02809, USA
| | - André C Morandini
- Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, Trav. 14, São Paulo, SP, 101, 05508-090, Brazil
- Centro de Biologia Marinha, Universidade de São Paulo, Rodovia Manuel Hipólito do Rego, km 131.5, São Sebastião, SP, 11612-109, Brazil
| | - Alvaro E Migotto
- Centro de Biologia Marinha, Universidade de São Paulo, Rodovia Manuel Hipólito do Rego, km 131.5, São Sebastião, SP, 11612-109, Brazil
| | - Maximiliano M Maronna
- Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, Trav. 14, São Paulo, SP, 101, 05508-090, Brazil
- Departamento de Ciências Biológicas, Universidade Estadual Paulista, Av. Eng. Luiz Edmundo Carrijo Coube, 14-01-Vargem Limpa-Bauru, São Paulo, Brazil
| | - Marcelo Reginato
- Departamento de Botânica, Instituto de Biociências, Universidade Federal do Rio Grande do Sul, Rio Grande, Brazil
| | - Hiroshi Miyake
- School of Marine Biosciences, Kitasato University, 1-15-1 Kitazato, Minami-ku, Sagamihara, 252-0373, Japan
| | - Renato M Nagata
- Instituto de Oceanografia, Universidade Federal do Rio Grande, Av. Itália, km 8, Rio Grande, RS, 96203-000, Brazil
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6
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Ye J, Yao YC, Gao JY, Chen S, Zhang P, Sheng L, Liu J. LM-Jelly: Liquid Metal Enabled Biomimetic Robotic Jellyfish. Soft Robot 2022; 9:1098-1107. [PMID: 35486839 DOI: 10.1089/soro.2021.0055] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/11/2023] Open
Abstract
Jellyfish have attracted worldwide attention owing to their fantastic moving styles, which also inspired development in soft robotics to meet the demands of underwater surveillance. In this study, a soft robotic jellyfish integrated liquid metal coil, and magnetic field is proposed for the first time to mimic the soft rowing propulsion of oblate jellyfish. The soft robotic jellyfish is actuated by the entirely soft electromagnetic actuators that enabled the gentle motion. Through conceptual experiments and computational fluid dynamics simulations, we systematically interpreted the mechanism of this robotic jellyfish and various factors to dominate its movement behaviors, which involve vortex formation and ascending modalities. Besides, underwater monitoring and bio-friendliness of robotic jellyfish were also demonstrated to illustrate its potential application scenarios and gentle motion characteristics. This study will help to broaden the vistas for liquid metal enabled bionic robotics in a wide range of underwater applications.
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Affiliation(s)
- Jiao Ye
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
| | - Yu-Chen Yao
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
| | - Jian-Ye Gao
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Engineering Science, University of Chinese Academy of Sciences, Beijing, China
| | - Sen Chen
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
| | - Pan Zhang
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing, China
| | - Lei Sheng
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China
| | - Jing Liu
- Beijing Key Lab of CryoBiomedical Engineering and Key Lab of Cryogenics, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing, China.,School of Future Technology, University of Chinese Academy of Sciences, Beijing, China.,School of Engineering Science, University of Chinese Academy of Sciences, Beijing, China.,Department of Biomedical Engineering, School of Medicine, Tsinghua University, Beijing, China
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7
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Ying Z, Zhang H, Wang L, Melnik R. Propulsion optimization of a jellyfish-inspired robot based on a nonintrusive reduced-order model with proper orthogonal decomposition. BIOINSPIRATION & BIOMIMETICS 2022; 17:046005. [PMID: 35366655 DOI: 10.1088/1748-3190/ac6374] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Accepted: 04/01/2022] [Indexed: 06/14/2023]
Abstract
In this research, the propulsion of the proposed jellyfish-inspired mantle undulated propulsion robot (MUPRo) is optimized. To reliably predict the hydrodynamic forces acting on the robot, the proposed nonintrusive reduced-order model (NIROM) based on proper orthogonal decomposition (POD) additionally considers the POD basis that makes an important contribution to the features on the specified boundary. The proposed model establishes a mapping between the parameter-driven motion of the mantle and the evolution of the fluid characteristics around the swimmer. Moreover, to predict new cases where the input needs to be updated, the input of the proposed model is taken from the kinematics of the robot rather than extracted from full-order high-fidelity models. In this paper, it takes approximately 950 s to perform a simulation using the full-order high-fidelity model. However, the computational cost for one prediction with the proposed POD-NIROM is around 0.54 s, of which about 0.2 s is contributed by preprocessing. Compared with the NIROM based on the classic POD method, the proposed POD-NIROM can effectively update the input and reasonably predict the characteristics on the boundary. The analysis of the hydrodynamic performance of the MUPRo pinpoints that, over a certain period and with a certain undulation amplitude, the hydrodynamic force generated by the swinging-like mantle motion (k< 0.5) is greater, outperformingAequorea victoriain startup acceleration. It is demonstrated that considering a certain power loss and a certain tail beat amplitude, the wave-like mantle motion (k> 0.5) can produce greater propulsion, which means higher propulsion efficiency.
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Affiliation(s)
- Zixiang Ying
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Haozhi Zhang
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Linxiang Wang
- State Key Laboratory of Fluid Power and Mechatronic Systems, Zhejiang University, 310027 Hangzhou, People's Republic of China
| | - Roderick Melnik
- MS2Discovery Interdisciplinary Research Institute, Wilfrid Laurier University, Waterloo, ON N2L 3L5, Canada
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8
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Exploring the sensitivity in jellyfish locomotion under variations in scale, frequency, and duty cycle. J Math Biol 2021; 83:56. [PMID: 34731319 DOI: 10.1007/s00285-021-01678-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2020] [Revised: 08/04/2021] [Accepted: 10/13/2021] [Indexed: 10/19/2022]
Abstract
Jellyfish have been called one of the most energy-efficient animals in the world due to the ease in which they move through their fluid environment, by product of their bell kinematics coupled with their morphological, muscular, material properties. We investigated jellyfish locomotion by conducting in silico comparative studies and explored swimming performance across different fluid scales (i.e., Reynolds Number), bell contraction frequencies, and contraction phase kinematics (duty cycle) for a jellyfish with a fineness ratio of 1 (ratio of bell height to bell diameter). To study these relationships, an open source implementation of the immersed boundary method was used (IB2d) to solve the fully coupled fluid-structure interaction problem of a flexible jellyfish bell in a viscous fluid. Thorough 2D parameter subspace explorations illustrated optimal parameter combinations in which give rise to enhanced swimming performance. All performance metrics indicated a higher sensitivity to bell actuation frequency than fluid scale or duty cycle, via Sobol sensitivity analysis, on a higher performance parameter subspace. Moreover, Pareto-like fronts were identified in the overall performance space involving the cost of transport and forward swimming speed. Patterns emerged within these performance spaces when highlighting different parameter regions, which complemented the global sensitivity results. Lastly, an open source computational model for jellyfish locomotion is offered to the science community that can be used as a starting place for future numerical experimentation.
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9
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Numerical Simulation of Self-Propelled Steady Jet Propulsion at Intermediate Reynolds Numbers: Effects of Orifice Size on Animal Jet Propulsion. FLUIDS 2021. [DOI: 10.3390/fluids6060230] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Most marine jet-propelled animals have low swimming efficiencies and relatively small jet orifices. Motivated by this, the present computational fluid dynamics study simulates the flow for a jet-propelled axisymmetric body swimming steadily at intermediate Reynolds numbers of order 1–1000. Results show that swimming-imposed flow field, drag coefficients, swimming efficiencies, and performance index (a metric comparing swimming speeds sustained by differently sized orifices ejecting the same volume flow rate) all depend strongly on orifice size, and orifice size affects the configuration of oppositely signed body vorticity and jet vorticity, thereby affecting wake and efficiency. As orifice size decreases, efficiencies decrease considerably, while performance index increases substantially, suggesting that, for a given jet volume flow rate, a smaller orifice supports faster swimming than a larger one does, albeit at reduced efficiency. These results support the notion that most jet-propelled animals having relatively small jet orifices may be an adaptation to deal with the physical constraint of limited total volume of water available for jetting, while needing to compete for fast swimming. Finally, jet orifice size is discussed regarding the role of jet propulsion in jet-propelled animal ecology, particularly for salps that use two relatively large siphons to respectively draw in and expel water.
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10
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Gemmell BJ, Dabiri JO, Colin SP, Costello JH, Townsend JP, Sutherland KR. Cool your jets: biological jet propulsion in marine invertebrates. J Exp Biol 2021; 224:269180. [PMID: 34137893 DOI: 10.1242/jeb.222083] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Pulsatile jet propulsion is a common swimming mode used by a diverse array of aquatic taxa from chordates to cnidarians. This mode of locomotion has interested both biologists and engineers for over a century. A central issue to understanding the important features of jet-propelling animals is to determine how the animal interacts with the surrounding fluid. Much of our knowledge of aquatic jet propulsion has come from simple theoretical approximations of both propulsive and resistive forces. Although these models and basic kinematic measurements have contributed greatly, they alone cannot provide the detailed information needed for a comprehensive, mechanistic overview of how jet propulsion functions across multiple taxa, size scales and through development. However, more recently, novel experimental tools such as high-speed 2D and 3D particle image velocimetry have permitted detailed quantification of the fluid dynamics of aquatic jet propulsion. Here, we provide a comparative analysis of a variety of parameters such as efficiency, kinematics and jet parameters, and review how they can aid our understanding of the principles of aquatic jet propulsion. Research on disparate taxa allows comparison of the similarities and differences between them and contributes to a more robust understanding of aquatic jet propulsion.
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Affiliation(s)
- Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, Florida 33620, USA
| | - John O Dabiri
- Graduate Aerospace Laboratories and Department of Mechanical and Civil Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Sean P Colin
- Department of Marine Biology and Environmental Science, Roger Williams University, Bristol, Rhode Island 02809, USA
| | - John H Costello
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA
| | - James P Townsend
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, Oregon 97403, USA
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11
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Byron ML, Murphy DW, Katija K, Hoover AP, Daniels J, Garayev K, Takagi D, Kanso E, Gemmell BJ, Ruszczyk M, Santhanakrishnan A. Metachronal motion across scales: current challenges and future directions. Integr Comp Biol 2021; 61:1674-1688. [PMID: 34048537 DOI: 10.1093/icb/icab105] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
Metachronal motion is used across a wide range of organisms for a diverse set of functions. However, despite its ubiquity, analysis of this behavior has been difficult to generalize across systems. Here we provide an overview of known commonalities and differences between systems that use metachrony to generate fluid flow. We also discuss strategies for standardizing terminology and defining future investigative directions that are analogous to other established subfields of biomechanics. Lastly, we outline key challenges that are common to many metachronal systems, opportunities that have arisen due to the advent of new technology (both experimental and computational), and next steps for community development and collaboration across the nascent network of metachronal researchers.
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Affiliation(s)
| | - David W Murphy
- University of South Florida, 4202 E. Fowler Ave, Tampa, FL, 33620, USA
| | - Kakani Katija
- Monterey Bay Aquarium Research Institute, 7700 Sandholdt Rd, Moss Landing, CA, 95039, USA
| | | | - Joost Daniels
- Monterey Bay Aquarium Research Institute, 7700 Sandholdt Rd, Moss Landing, CA, 95039, USA
| | - Kuvvat Garayev
- University of South Florida, 4202 E. Fowler Ave, Tampa, FL, 33620, USA
| | - Daisuke Takagi
- University of Hawaii at Manoa, 2500 Campus Rd, Honolulu, HI, 96822
| | - Eva Kanso
- University of Southern California, University Park, Los Angeles, CA, 90007
| | | | - Melissa Ruszczyk
- Georgia Institute of Technology, 310 Ferst Dr, Atlanta, GA, 30332, USA
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12
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Abstract
For organisms to have robust locomotion, their neuromuscular organization must adapt to constantly changing environments. In jellyfish, swimming robustness emerges when marginal pacemakers fire action potentials throughout the bell's motor nerve net, which signals the musculature to contract. The speed of the muscle activation wave is dictated by the passage times of the action potentials. However, passive elastic material properties also influence the emergent kinematics, with time scales independent of neuromuscular organization. In this multimodal study, we examine the interplay between these two time scales during turning. A three-dimensional computational fluid-structure interaction model of a jellyfish was developed to determine the resulting emergent kinematics, using bidirectional muscular activation waves to actuate the bell rim. Activation wave speeds near the material wave speed yielded successful turns, with a 76-fold difference in turning rate between the best and worst performers. Hyperextension of the margin occurred only at activation wave speeds near the material wave speed, suggesting resonance. This hyperextension resulted in a 34-fold asymmetry in the circulation of the vortex ring between the inside and outside of the turn. Experimental recording of the activation speed confirmed that jellyfish actuate within this range, and flow visualization using particle image velocimetry validated the corresponding fluid dynamics of the numerical model. This suggests that neuromechanical wave resonance plays an important role in the robustness of an organism's locomotory system and presents an undiscovered constraint on the evolution of flexible organisms. Understanding these dynamics is essential for developing actuators in soft body robotics and bioengineered pumps.
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13
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Gemmell BJ, Du Clos KT, Colin SP, Sutherland KR, Costello JH. The most efficient metazoan swimmer creates a 'virtual wall' to enhance performance. Proc Biol Sci 2021; 288:20202494. [PMID: 33402068 DOI: 10.1098/rspb.2020.2494] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
It has been well documented that animals (and machines) swimming or flying near a solid boundary get a boost in performance. This ground effect is often modelled as an interaction between a mirrored pair of vortices represented by a true vortex and an opposite sign 'virtual vortex' on the other side of the wall. However, most animals do not swim near solid surfaces and thus near body vortex-vortex interactions in open-water swimmers have been poorly investigated. In this study, we examine the most energetically efficient metazoan swimmer known to date, the jellyfish Aurelia aurita, to elucidate the role that vortex interactions can play in animals that swim away from solid boundaries. We used high-speed video tracking, laser-based digital particle image velocimetry (dPIV) and an algorithm for extracting pressure fields from flow velocity vectors to quantify swimming performance and the effect of near body vortex-vortex interactions. Here, we show that a vortex ring (stopping vortex), created underneath the animal during the previous swim cycle, is critical for increasing propulsive performance. This well-positioned stopping vortex acts in the same way as a virtual vortex during wall-effect performance enhancement, by helping converge fluid at the underside of the propulsive surface and generating significantly higher pressures which result in greater thrust. These findings advocate that jellyfish can generate a wall-effect boost in open water by creating what amounts to a 'virtual wall' between two real, opposite sign vortex rings. This explains the significant propulsive advantage jellyfish possess over other metazoans and represents important implications for bio-engineered propulsion systems.
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Affiliation(s)
- Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Kevin T Du Clos
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA.,Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, OR, USA
| | - John H Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA.,Biology Department, Providence College, Providence, RI 02908, USA
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14
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Costello JH, Colin SP, Dabiri JO, Gemmell BJ, Lucas KN, Sutherland KR. The Hydrodynamics of Jellyfish Swimming. ANNUAL REVIEW OF MARINE SCIENCE 2021; 13:375-396. [PMID: 32600216 DOI: 10.1146/annurev-marine-031120-091442] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Jellyfish have provided insight into important components of animal propulsion, such as suction thrust, passive energy recapture, vortex wall effects, and the rotational mechanics of turning. These traits are critically important to jellyfish because they must propel themselves despite severe limitations on force production imposed by rudimentary cnidarian muscular structures. Consequently, jellyfish swimming can occur only by careful orchestration of fluid interactions. Yet these mechanics may be more broadly instructive because they also characterize processes shared with other animal swimmers, whose structural and neurological complexity can obscure these interactions. In comparison with other animal models, the structural simplicity, comparative energetic efficiency, and ease of use in laboratory experimentation allow jellyfish to serve as favorable test subjects for exploration of the hydrodynamic bases of animal propulsion. These same attributes also make jellyfish valuable models for insight into biomimetic or bioinspired engineeringof swimming vehicles. Here, we review advances in understanding of propulsive mechanics derived from jellyfish models as a pathway toward the application of animal mechanics to vehicle designs.
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Affiliation(s)
- John H Costello
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA;
| | - Sean P Colin
- Department of Marine Biology and Environmental Science, Roger Williams University, Bristol, Rhode Island 02809, USA;
| | - John O Dabiri
- Graduate Aerospace Laboratories and Department of Mechanical and Civil Engineering, California Institute of Technology, Pasadena, California 91125, USA;
| | - Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, Florida 33620, USA;
| | - Kelsey N Lucas
- School for Environment and Sustainability, University of Michigan, Ann Arbor, Michigan 48109, USA;
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, Oregon 97403, USA;
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15
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Karakas F, Maas AE, Murphy DW. A novel cylindrical overlap-and-fling mechanism used by sea butterflies. J Exp Biol 2020; 223:jeb221499. [PMID: 32587067 DOI: 10.1242/jeb.221499] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2020] [Accepted: 06/19/2020] [Indexed: 11/20/2022]
Abstract
The clap-and-fling mechanism is a well-studied, unsteady lift generation mechanism widely used by flying insects and is considered obligatory for tiny insects flying at low to intermediate Reynolds numbers, Re However, some aquatic zooplankters including some pteropod (i.e. sea butterfly) and heteropod species swimming at low to intermediate Re also use the clap-and-fling mechanism. These marine snails have extremely flexible, actively deformed, muscular wings which they flap reciprocally to create propulsive force, and these wings may enable novel lift generation mechanisms not available to insects, which have less flexible, passively deformed wings. Using high-speed stereophotogrammetry and micro-particle image velocimetry, we describe a novel cylindrical overlap-and-fling mechanism used by the pteropod species Cuvierina atlantica In this maneuver, the pteropod's wingtips overlap at the end of each half-stroke to sequentially form a downward-opening cone, a cylinder and an upward-opening cone. The transition from downward-opening cone to cylinder produces a downward-directed jet at the trailing edges. Similarly, the transition from cylinder to upward-opening cone produces downward flow into the gap between the wings, a leading edge vortex ring and a corresponding sharp increase in swimming speed. The ability of this pteropod species to perform the cylindrical overlap-and-fling maneuver twice during each stroke is enabled by its slender body and highly flexible wings. The cylindrical overlap-and-fling mechanism observed here may inspire the design of new soft robotic aquatic vehicles incorporating highly flexible propulsors to take advantage of this novel lift generation technique.
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Affiliation(s)
- Ferhat Karakas
- Department of Mechanical Engineering, University of South Florida, Tampa, FL 33620, USA
| | - Amy E Maas
- Bermuda Institute of Ocean Sciences, St George's GE01, Bermuda
| | - David W Murphy
- Department of Mechanical Engineering, University of South Florida, Tampa, FL 33620, USA
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16
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Transient pressure modeling in jetting animals. J Theor Biol 2020; 494:110237. [DOI: 10.1016/j.jtbi.2020.110237] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Revised: 02/18/2020] [Accepted: 03/03/2020] [Indexed: 11/23/2022]
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17
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Abstract
The feeding current of scyphomedusae entrains and transports surrounding fluids and prey through trailing tentacles to initiate encounters with prey. After contact, most prey are retained for ingestion. However, the probability that a contact will occur depends on several factors including capture surface morphology, prey size and behavior. We examined how hydrodynamics, capture surface morphology and prey behavior affect the capture probability of copepods. To do this, we documented medusa-copepod interactions of four species of scyphomedusae (two semeostomes and two rhizostomes) possessing different capture surface morphologies. We tracked the movement and behavior of entrained copepods throughout the feeding process to quantify prey behavior effects upon capture efficiency (# captures/# encounters). The feeding currents generated by all the medusan species generated fluid shear deformation rates well above the detection limits of copepods. Despite strong hydrodynamic signals, copepod behavior was highly variable and only 58% of the copepods reacted to entrainment within feeding currents. Furthermore, copepod behavior (categorized as no reaction, escape jump or adjustment jump) did not significantly affect the capture efficiency. The scale and complexity of the feeding current generated by scyphomedusae may help explain the poor ability of copepods to avoid capture.
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18
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Xu NW, Dabiri JO. Low-power microelectronics embedded in live jellyfish enhance propulsion. SCIENCE ADVANCES 2020; 6:eaaz3194. [PMID: 32064355 PMCID: PMC6989144 DOI: 10.1126/sciadv.aaz3194] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2019] [Accepted: 11/22/2019] [Indexed: 05/29/2023]
Abstract
Artificial control of animal locomotion has the potential to simultaneously address longstanding challenges to actuation, control, and power requirements in soft robotics. Robotic manipulation of locomotion can also address previously inaccessible questions about organismal biology otherwise limited to observations of naturally occurring behaviors. Here, we present a biohybrid robot that uses onboard microelectronics to induce swimming in live jellyfish. Measurements demonstrate that propulsion can be substantially enhanced by driving body contractions at an optimal frequency range faster than natural behavior. Swimming speed can be enhanced nearly threefold, with only a twofold increase in metabolic expenditure of the animal and 10 mW of external power input to the microelectronics. Thus, this biohybrid robot uses 10 to 1000 times less external power per mass than other aquatic robots reported in literature. This capability can expand the performance envelope of biohybrid robots relative to natural animals for applications such as ocean monitoring.
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Affiliation(s)
- Nicole W. Xu
- Department of Bioengineering, School of Engineering and School of Medicine, Stanford University, Stanford, CA 94305, USA
| | - John O. Dabiri
- Department of Civil and Environmental Engineering, School of Engineering, Stanford University, Stanford, CA 94305, USA
- Department of Mechanical Engineering, School of Engineering, Stanford University, Stanford, CA 94305, USA
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19
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The Levantine jellyfish Rhopilema nomadica and Rhizostoma pulmo swim faster against the flow than with the flow. Sci Rep 2019; 9:20337. [PMID: 31889070 PMCID: PMC6937341 DOI: 10.1038/s41598-019-56311-3] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2019] [Accepted: 11/28/2019] [Indexed: 11/11/2022] Open
Abstract
Jellyfish locomotion and orientation have been studied in the past both in the laboratory, testing mostly small jellyfish, and in the field, where it was impossible to control the seawater currents. Utilizing an outdoor water flume, we tested the locomotion of jellyfish when swimming against and with currents of up to 4.5 cm s−1. We used adult jellyfish from two of the most abundant species in the eastern Mediterranean, Rhopilema nomadica and Rhizostoma pulmo, and measured their pulsation frequency and swimming speed relative to the water. While pulsation frequency was not affected by the water velocity, jellyfish swam faster against the current than with it. This finding suggests that jellyfish possess a sensory ability, whose mechanism is currently unknown, enabling them to gauge the flow and react to it, possibly in order to reduce the risk of stranding.
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20
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Pallasdies F, Goedeke S, Braun W, Memmesheimer RM. From single neurons to behavior in the jellyfish Aurelia aurita. eLife 2019; 8:e50084. [PMID: 31868586 PMCID: PMC6999044 DOI: 10.7554/elife.50084] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2019] [Accepted: 12/22/2019] [Indexed: 01/13/2023] Open
Abstract
Jellyfish nerve nets provide insight into the origins of nervous systems, as both their taxonomic position and their evolutionary age imply that jellyfish resemble some of the earliest neuron-bearing, actively-swimming animals. Here, we develop the first neuronal network model for the nerve nets of jellyfish. Specifically, we focus on the moon jelly Aurelia aurita and the control of its energy-efficient swimming motion. The proposed single neuron model disentangles the contributions of different currents to a spike. The network model identifies factors ensuring non-pathological activity and suggests an optimization for the transmission of signals. After modeling the jellyfish's muscle system and its bell in a hydrodynamic environment, we explore the swimming elicited by neural activity. We find that different delays between nerve net activations lead to well-controlled, differently directed movements. Our model bridges the scales from single neurons to behavior, allowing for a comprehensive understanding of jellyfish neural control of locomotion.
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Affiliation(s)
- Fabian Pallasdies
- Neural Network Dynamics and Computation, Institute of GeneticsUniversity of BonnBonnGermany
| | - Sven Goedeke
- Neural Network Dynamics and Computation, Institute of GeneticsUniversity of BonnBonnGermany
| | - Wilhelm Braun
- Neural Network Dynamics and Computation, Institute of GeneticsUniversity of BonnBonnGermany
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21
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Wilhelmus MM, Nawroth J, Rallabandi B, Dabiri JO. Effect of swarm configuration on fluid transport during vertical collective motion. BIOINSPIRATION & BIOMIMETICS 2019; 15:015002. [PMID: 31509804 DOI: 10.1088/1748-3190/ab435b] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Understanding the hydrodynamics of self-propelled organisms is critical to evaluate the role of migrating zooplankton aggregations in sustaining marine ecosystems via the transport of nutrients and mixing of fluid properties. Analysis of transport and mixing during swimming is thus essential to assess whether biomixing is a relevant source of kinetic energy in the upper ocean. In this study, dilute swarms of the ephyral Aurelia aurita were simulated under different configurations to analyze the effects of inter-organism spacing and structure of a migrating aggregation on fluid transport. By using velocimetry data instead of numerically simulated velocity fields, our study integrates the effects of the near- and far-field flows. Lagrangian analysis of simulated fluid particles, both in homogeneous and stratified fluid, shows that the near-field flow ultimately dictates fluid dispersion. The discrepancy between our results and predictions made using low-order models (both in idealized fluid and within the Stokes limit) highlights the need to correctly represent the near-field flow resulting from swimming kinematics and organism morphology. Derived vertical stirring coefficients for all cases suggest that even in the limit of dilute aggregations, self-propelled organisms can play an important role in transporting fluid against density gradients.
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Affiliation(s)
- M M Wilhelmus
- Department of Mechanical Engineering, University of California Riverside, 900 University Ave, Riverside, CA, 92521, United States of America
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22
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Naut Your Everyday Jellyfish Model: Exploring How Tentacles and Oral Arms Impact Locomotion. FLUIDS 2019. [DOI: 10.3390/fluids4030169] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/22/2023]
Abstract
Jellyfish are majestic, energy-efficient, and one of the oldest species that inhabit the oceans. It is perhaps the second item, their efficiency, that has captivated scientists for decades into investigating their locomotive behavior. Yet, no one has specifically explored the role that their tentacles and oral arms may have on their potential swimming performance. We perform comparative in silico experiments to study how tentacle/oral arm number, length, placement, and density affect forward swimming speeds, cost of transport, and fluid mixing. An open source implementation of the immersed boundary method was used (IB2d) to solve the fully coupled fluid–structure interaction problem of an idealized flexible jellyfish bell with poroelastic tentacles/oral arms in a viscous, incompressible fluid. Overall tentacles/oral arms inhibit forward swimming speeds, by appearing to suppress vortex formation. Nonlinear relationships between length and fluid scale (Reynolds Number) as well as tentacle/oral arm number, density, and placement are observed, illustrating that small changes in morphology could result in significant decreases in swimming speeds, in some cases by upwards of 80–90% between cases with or without tentacles/oral arms.
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23
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Sinatra NR, Teeple CB, Vogt DM, Parker KK, Gruber DF, Wood RJ. Ultragentle manipulation of delicate structures using a soft robotic gripper. Sci Robot 2019; 4:4/33/eaax5425. [DOI: 10.1126/scirobotics.aax5425] [Citation(s) in RCA: 96] [Impact Index Per Article: 19.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2019] [Accepted: 08/05/2019] [Indexed: 11/02/2022]
Abstract
Here, we present ultragentle soft robotic actuators capable of grasping delicate specimens of gelatinous marine life. Although state-of-the-art soft robotic manipulators have demonstrated gentle gripping of brittle animals (e.g., corals) and echinoderms (e.g., sea cucumbers) in the deep sea, they are unable to nondestructively grasp more fragile soft-bodied organisms, such as jellyfish. Through an exploration of design parameters and laboratory testing of individual actuators, we confirmed that our nanofiber-reinforced soft actuators apply sufficiently low contact pressure to ensure minimal harm to typical jellyfish species. We then built a gripping device using several actuators and evaluated its underwater grasping performance in the laboratory. By assessing the gripper’s region of acquisition and robustness to external forces, we gained insight into the necessary precision and speed with which grasping maneuvers must be performed to achieve successful collection of samples. Last, we demonstrated successful manipulation of three live jellyfish species in an aquarium setting using a hand-held prototype gripper. Overall, our ultragentle gripper demonstrates an improvement in gentle sample collection compared with existing deep-sea sampling devices. Extensions of this technology may improve a variety of in situ characterization techniques used to study the ecological and genetic features of deep-sea organisms.
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24
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Samson JE, Miller LA, Ray D, Holzman R, Shavit U, Khatri S. A novel mechanism of mixing by pulsing corals. ACTA ACUST UNITED AC 2019; 222:jeb.192518. [PMID: 31315935 DOI: 10.1242/jeb.192518] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/13/2018] [Accepted: 07/12/2019] [Indexed: 11/20/2022]
Abstract
The dynamic pulsation of xeniid corals is one of the most fascinating phenomena observed in coral reefs. We quantify for the first time the flow near the tentacles of these soft corals, the active pulsations of which are thought to enhance their symbionts' photosynthetic rates by up to an order of magnitude. These polyps are approximately 1 cm in diameter and pulse at frequencies between approximately 0.5 and 1 Hz. As a result, the frequency-based Reynolds number calculated using the tentacle length and pulse frequency is on the order of 10 and rapidly decays as with distance from the polyp. This introduces the question of how these corals minimize the reversibility of the flow and bring in new volumes of fluid during each pulse. We estimate the Péclet number of the bulk flow generated by the coral as being on the order of 100-1000 whereas the flow between the bristles of the tentacles is on the order of 10. This illustrates the importance of advective transport in removing oxygen waste. Flow measurements using particle image velocimetry reveal that the individual polyps generate a jet of water with positive vertical velocities that do not go below 0.1 cm s-1 and with average volumetric flow rates of approximately 0.71 cm3 s-1 Our results show that there is nearly continual flow in the radial direction towards the polyp with only approximately 3.3% back flow. 3D numerical simulations uncover a region of slow mixing between the tentacles during expansion. We estimate that the average flow that moves through the bristles of the tentacles is approximately 0.03 cm s-1 The combination of nearly continual flow towards the polyp, slow mixing between the bristles, and the subsequent ejection of this fluid volume into an upward jet ensures the polyp continually samples new water with sufficient time for exchange to occur.
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Affiliation(s)
- Julia E Samson
- Biology Department, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
| | - Laura A Miller
- Biology Department, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA .,Department of Mathematics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
| | - Dylan Ray
- Department of Mathematics, University of North Carolina at Chapel Hill, Chapel Hill, NC 27599, USA
| | - Roi Holzman
- School of Zoology, Tel Aviv University, Tel Aviv 6997801, Israel.,Inter-University Institute for Marine Sciences, Eilat 8810302, Israel
| | - Uri Shavit
- Inter-University Institute for Marine Sciences, Eilat 8810302, Israel.,Faculty of Civil and Environmental Engineering, Technion-Israel Institute of Technology, Haifa 3200003, Israel
| | - Shilpa Khatri
- Department of Applied Mathematics, School of Natural Sciences, University of California, Merced, Merced, CA 95343, USA
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25
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Costello JH, Colin SP, Gemmell BJ, Dabiri JO. Hydrodynamics of Vortex Generation during Bell Contraction by the Hydromedusa Eutonina indicans (Romanes, 1876). Biomimetics (Basel) 2019; 4:biomimetics4030044. [PMID: 31284395 PMCID: PMC6784291 DOI: 10.3390/biomimetics4030044] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Revised: 06/29/2019] [Accepted: 07/02/2019] [Indexed: 02/01/2023] Open
Abstract
Swimming bell kinematics and hydrodynamic wake structures were documented during multiple pulsation cycles of a Eutonina indicans (Romanes, 1876) medusa swimming in a predominantly linear path. Bell contractions produced pairs of vortex rings with opposite rotational sense. Analyses of the momentum flux in these wake structures demonstrated that vortex dynamics related directly to variations in the medusa swimming speed. Furthermore, a bulk of the momentum flux in the wake was concentrated spatially at the interfaces between oppositely rotating vortices rings. Similar thrust-producing wake structures have been described in models of fish swimming, which posit vortex rings as vehicles for energy transport from locations of body bending to regions where interacting pairs of opposite-sign vortex rings accelerate the flow into linear propulsive jets. These findings support efforts toward soft robotic biomimetic propulsion.
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Affiliation(s)
- John H Costello
- Biology Department, Providence College, Providence, RI 02918, USA
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
| | - Sean P Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 66320, USA
| | - John O Dabiri
- School of Engineering, Stanford University, Stanford, CA 94306, USA.
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26
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Ren Z, Hu W, Dong X, Sitti M. Multi-functional soft-bodied jellyfish-like swimming. Nat Commun 2019; 10:2703. [PMID: 31266939 PMCID: PMC6606650 DOI: 10.1038/s41467-019-10549-7] [Citation(s) in RCA: 156] [Impact Index Per Article: 31.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 05/16/2019] [Indexed: 01/27/2023] Open
Abstract
The functionalities of the untethered miniature swimming robots significantly decrease as the robot size becomes smaller, due to limitations of feasible miniaturized on-board components. Here we propose an untethered jellyfish-inspired soft millirobot that could realize multiple functionalities in moderate Reynolds number by producing diverse controlled fluidic flows around its body using its magnetic composite elastomer lappets, which are actuated by an external oscillating magnetic field. We particularly investigate the interaction between the robot's soft body and incurred fluidic flows due to the robot's body motion, and utilize such physical interaction to achieve different predation-inspired object manipulation tasks. The proposed lappet kinematics can inspire other existing jellyfish-like robots to achieve similar functionalities at the same length and time scale. Moreover, the robotic platform could be used to study the impacts of the morphology and kinematics changing in ephyra jellyfish.
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Affiliation(s)
- Ziyu Ren
- Physical Intelligence Department, Max Planck Institute for Intelligent Systems, 70569, Stuttgart, Germany
| | - Wenqi Hu
- Physical Intelligence Department, Max Planck Institute for Intelligent Systems, 70569, Stuttgart, Germany
| | - Xiaoguang Dong
- Physical Intelligence Department, Max Planck Institute for Intelligent Systems, 70569, Stuttgart, Germany
| | - Metin Sitti
- Physical Intelligence Department, Max Planck Institute for Intelligent Systems, 70569, Stuttgart, Germany.
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27
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Gemmell BJ, Colin SP, Costello JH, Sutherland KR. A ctenophore (comb jelly) employs vortex rebound dynamics and outperforms other gelatinous swimmers. ROYAL SOCIETY OPEN SCIENCE 2019; 6:181615. [PMID: 31032019 PMCID: PMC6458386 DOI: 10.1098/rsos.181615] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Accepted: 01/31/2019] [Indexed: 06/08/2023]
Abstract
Gelatinous zooplankton exhibit a wide range of propulsive swimming modes. One of the most energetically efficient is the rowing behaviour exhibited by many species of schyphomedusae, which employ vortex interactions to achieve this result. Ctenophores (comb jellies) typically use a slow swimming, cilia-based mode of propulsion. However, species within the genus Ocyropsis have developed an additional propulsive strategy of rowing the lobes, which are normally used for feeding, in order to rapidly escape from predators. In this study, we used high-speed digital particle image velocimetry to examine the kinematics and fluid dynamics of this rarely studied propulsive mechanism. This mechanism allows Ocyropsis to achieve size-adjusted speeds that are nearly double those of other large gelatinous swimmers. The investigation of the fluid dynamic basis of this escape mode reveals novel vortex interactions that have not previously been described for other biological propulsion systems. The arrangement of vortices during escape swimming produces a similar configuration and impact as that of the well-studied 'vortex rebound' phenomenon which occurs when a vortex ring approaches a solid wall. These results extend our understanding of how animals use vortex-vortex interactions and provide important insights that can inform the bioinspired engineering of propulsion systems.
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Affiliation(s)
- Brad J. Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P. Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - John H. Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Biology Department, Providence College, Providence, RI 02908, USA
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28
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Neil TR, Askew GN. Jet-paddling jellies: swimming performance in the Rhizostomeae jellyfish Catostylus mosaicus. ACTA ACUST UNITED AC 2018; 221:jeb.191148. [PMID: 30348647 DOI: 10.1242/jeb.191148] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/22/2018] [Accepted: 10/14/2018] [Indexed: 11/20/2022]
Abstract
Jellyfish are a successful and diverse class of animals that swim via jet propulsion, with swimming performance and propulsive efficiency being related to the animal's feeding ecology and body morphology. The Rhizostomeae jellyfish lack tentacles but possess four oral lobes and eight trailing arms at the centre of their bell, giving them a body morphology quite unlike that of other free-swimming medusae. The implications of this body morphology on the mechanisms by which thrust is produced are unknown. Here, we determined the wake structure and propulsive efficiency in the blue-blubber jellyfish Catostylus mosaicus (order: Rhizostomeae). The animal is propelled during both bell contraction and bell relaxation by different thrust-generating mechanisms. During bell contraction, a jet of fluid is expelled from the subumbrellar cavity, which results from the interaction between the counter-rotating stopping (from the preceding contraction cycle) and starting vortices, creating a vortex superstructure and propulsion. This species is also able to utilise passive energy recapture, which increases the animal's swimming velocity towards the end of the bell expansion phase when the bell diameter is constant. The thrust produced during this phase is the result of the flexible bell margin manoeuvring the stopping vortex into the subumbrellar cavity during bell relaxation, enhancing its circulation, and creating a region of high pressure on the inner surface of the bell and, consequently, thrust. These mechanisms of thrust generation result in C. mosaicus having a relatively high propulsive efficiency compared with other swimmers, indicating that economical locomotion could be a contributing factor in the ecological success of these medusan swimmers.
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Affiliation(s)
- Thomas R Neil
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK
| | - Graham N Askew
- School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds LS2 9JT, UK
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29
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Frame J, Lopez N, Curet O, Engeberg ED. Thrust force characterization of free-swimming soft robotic jellyfish. BIOINSPIRATION & BIOMIMETICS 2018; 13:064001. [PMID: 30226216 DOI: 10.1088/1748-3190/aadcb3] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Five unique soft robotic jellyfish were manufactured with eight pneumatic network tentacle actuators extending radially from their centers. These jellyfish robots were able to freely swim untethered in the ocean, to steer from side to side, and to swim through orifices more narrow than the nominal diameter of the jellyfish. Each of the five jellyfish robots were manufactured with a different composition of body and tentacle actuator Shore hardness. A three-factor study was performed with these five jellyfish robots to determine the impact that actuator material Shore hardness, actuation frequency, and tentacle stroke actuation amplitude had upon the measured thrust force. It was found that all three of these factors significantly impacted mean thrust force generation, which peaked with a half-stroke actuation amplitude at a frequency of 0.8 Hz.
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Affiliation(s)
- Jennifer Frame
- Naval Surface Warfare Center Carderock Division, 9500 MacArthur Blvd, Bethesda, MD 20817, United States of America
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30
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Sutherland KR, Weihs D. Hydrodynamic advantages of swimming by salp chains. J R Soc Interface 2018; 14:rsif.2017.0298. [PMID: 28768881 DOI: 10.1098/rsif.2017.0298] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/22/2017] [Accepted: 07/06/2017] [Indexed: 11/12/2022] Open
Abstract
Salps are marine invertebrates comprising multiple jet-propelled swimming units during a colonial life-cycle stage. Using theory, we show that asynchronous swimming with multiple pulsed jets yields substantial hydrodynamic benefit due to the production of steady swimming velocities, which limit drag. Laboratory comparisons of swimming kinematics of aggregate salps (Salpa fusiformis and Weelia cylindrica) using high-speed video supported that asynchronous swimming by aggregates results in a smoother velocity profile and showed that this smoother velocity profile is the result of uncoordinated, asynchronous swimming by individual zooids. In situ flow visualizations of W. cylindrica swimming wakes revealed that another consequence of asynchronous swimming is that fluid interactions between jet wakes are minimized. Although the advantages of multi-jet propulsion have been mentioned elsewhere, this is the first time that the theory has been quantified and the role of asynchronous swimming verified using experimental data from the laboratory and the field.
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Affiliation(s)
- Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, OR, USA
| | - Daniel Weihs
- Department of Aerospace Engineering and Autonomous Systems Program, Technion, Haifa, Israel
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31
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Leclère L, Röttinger E. Diversity of Cnidarian Muscles: Function, Anatomy, Development and Regeneration. Front Cell Dev Biol 2017; 4:157. [PMID: 28168188 PMCID: PMC5253434 DOI: 10.3389/fcell.2016.00157] [Citation(s) in RCA: 31] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2016] [Accepted: 12/30/2016] [Indexed: 12/12/2022] Open
Abstract
The ability to perform muscle contractions is one of the most important and distinctive features of eumetazoans. As the sister group to bilaterians, cnidarians (sea anemones, corals, jellyfish, and hydroids) hold an informative phylogenetic position for understanding muscle evolution. Here, we review current knowledge on muscle function, diversity, development, regeneration and evolution in cnidarians. Cnidarian muscles are involved in various activities, such as feeding, escape, locomotion and defense, in close association with the nervous system. This variety is reflected in the large diversity of muscle organizations found in Cnidaria. Smooth epithelial muscle is thought to be the most common type, and is inferred to be the ancestral muscle type for Cnidaria, while striated muscle fibers and non-epithelial myocytes would have been convergently acquired within Cnidaria. Current knowledge of cnidarian muscle development and its regeneration is limited. While orthologs of myogenic regulatory factors such as MyoD have yet to be found in cnidarian genomes, striated muscle formation potentially involves well-conserved myogenic genes, such as twist and mef2. Although satellite cells have yet to be identified in cnidarians, muscle plasticity (e.g., de- and re-differentiation, fiber repolarization) in a regenerative context and its potential role during regeneration has started to be addressed in a few cnidarian systems. The development of novel tools to study those organisms has created new opportunities to investigate in depth the development and regeneration of cnidarian muscle cells and how they contribute to the regenerative process.
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Affiliation(s)
- Lucas Leclère
- Sorbonne Universités, UPMC Univ Paris 06, CNRS, Laboratoire de Biologie du Développement de Villefranche-sur-mer (LBDV) Villefranche-sur-mer, France
| | - Eric Röttinger
- Université Côte d'Azur, CNRS, INSERM, Institute for Research on Cancer and Aging (IRCAN) Nice, France
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32
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Gemmell BJ, Colin SP, Costello JH. Widespread utilization of passive energy recapture in swimming medusae. J Exp Biol 2017; 221:jeb.168575. [DOI: 10.1242/jeb.168575] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2017] [Accepted: 11/20/2017] [Indexed: 11/20/2022]
Abstract
Recently, it has been shown that some medusae are capable of swimming very efficiently, i.e.; with a low cost of transport, and that this is in part due to passive energy recapture (PER) which occurs during bell relaxation. We compared the swimming kinematics among a diverse array of medusae, varying in taxonomy, morphology and propulsive and foraging modes, in order to evaluate the prevalence of PER in medusae. We found that while PER is commonly observed among taxa, the magnitude of the contribution to overall swimming varied greatly. The ability of medusae to utilize PER was not related to morphology and swimming performance but was controlled by their swimming kinematics. Utilizing PER required the medusae to pause after bell expansion and individuals could modulate their PER by changing their pause duration. Passive energy recapture can greatly enhance swimming efficiency but there appear to be trade-offs associated with utilizing PER.
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Affiliation(s)
- Brad J. Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P. Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - John H. Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Biology Department, Providence College, Providence, RI 02908, USA
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Gemmell BJ, Bacosa HP, Liu Z, Buskey EJ. Can gelatinous zooplankton influence the fate of crude oil in marine environments? MARINE POLLUTION BULLETIN 2016; 113:483-487. [PMID: 27609236 DOI: 10.1016/j.marpolbul.2016.08.065] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2016] [Revised: 08/20/2016] [Accepted: 08/24/2016] [Indexed: 06/06/2023]
Abstract
Gelatinous zooplankton are known for their capacity to excrete copious amounts of mucus that can be utilized by other organisms. The release of mucus is exacerbated by stressful conditions. Despite the recognized importance of cnidarian mucus to production and material flux in marine ecosystems, the role of gelatinous zooplankton in influencing the fate of oil spills is unknown. In this study we used laboratory experiments to observe the influence of mucus from the moon jellyfish (Aurelia aurita) on the aggregation and degradation of crude oil. The results show that jellyfish swimming in a dispersed solution of oil droplets produced copious amounts of mucus and the mucus aggregates that were shed by the animals contained 26 times more oil than the surrounding water. Incubation experiments showed that hydrocarbon degrading bacteria cell densities more than doubled in the presence of mucus and after 14days, resulted in a significant increase in oil degradation. These results suggest that jellyfish can aggregate dispersed oil droplets and embed them within a matrix that favors hydrocarbon degrading bacteria. While this study lends support to the hypothesis that the presence of gelatinous zooplankton can impact oil spills large scale mesocosm studies will be needed to fully quantify the influence on a natural system.
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Affiliation(s)
- Brad J Gemmell
- Marine Science Institute, University of Texas at Austin, Port Aransas, TX 78373, USA; Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA.
| | - Hernando P Bacosa
- Marine Science Institute, University of Texas at Austin, Port Aransas, TX 78373, USA
| | - Zhanfei Liu
- Marine Science Institute, University of Texas at Austin, Port Aransas, TX 78373, USA
| | - Edward J Buskey
- Marine Science Institute, University of Texas at Austin, Port Aransas, TX 78373, USA
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Gemmell BJ, Troolin DR, Costello JH, Colin SP, Satterlie RA. Control of vortex rings for manoeuvrability. J R Soc Interface 2016; 12:20150389. [PMID: 26136226 DOI: 10.1098/rsif.2015.0389] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Manoeuvrability is critical to the success of many species. Selective forces acting over millions of years have resulted in a range of capabilities currently unmatched by machines. Thus, understanding animal control of fluids for manoeuvring has both biological and engineering applications. Within inertial fluid regimes, propulsion involves the formation and interaction of vortices to generate thrust. We use both volumetric and planar imaging techniques to quantify how jellyfish (Aurelia aurita) modulate vortex rings during turning behaviour. Our results show that these animals distort individual vortex rings during turns to alter the force balance across the animal, primarily through kinematic modulation of the bell margin. We find that only a portion of the vortex ring separates from the body during turns, which may increase torque. Using a fluorescent actin staining method, we demonstrate the presence of radial muscle fibres lining the bell along the margin. The presence of radial muscles provides a mechanistic explanation for the ability of scyphomedusae to alter their bell kinematics to generate non-symmetric thrust for manoeuvring. These results illustrate the advantage of combining imaging methods and provide new insights into the modulation and control of vorticity for low-speed animal manoeuvring.
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Affiliation(s)
- Brad J Gemmell
- Eugene Bell Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA Biology Department, Providence College, Providence, RI 02908, USA
| | | | - John H Costello
- Eugene Bell Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA Biology Department, Providence College, Providence, RI 02908, USA
| | - Sean P Colin
- Eugene Bell Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA Marine Biology and Environmental Science, Roger Williams University, Bristol, RI 02809, USA
| | - Richard A Satterlie
- Biology and Marine Biology, University of North Carolina Wilmington, Wilmington, NC 28403, USA
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Gold DA, Nakanishi N, Hensley NM, Cozzolino K, Tabatabaee M, Martin M, Hartenstein V, Jacobs DK. Structural and Developmental Disparity in the Tentacles of the Moon Jellyfish Aurelia sp.1. PLoS One 2015; 10:e0134741. [PMID: 26241309 PMCID: PMC4524682 DOI: 10.1371/journal.pone.0134741] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2015] [Accepted: 07/13/2015] [Indexed: 01/13/2023] Open
Abstract
Tentacles armed with stinging cells (cnidocytes) are a defining trait of the cnidarians, a phylum that includes sea anemones, corals, jellyfish, and hydras. While cnidarian tentacles are generally characterized as structures evolved for feeding and defense, significant variation exists between the tentacles of different species, and within the same species across different life stages and/or body regions. Such diversity suggests cryptic distinctions exist in tentacle function. In this paper, we use confocal and transmission electron microscopy to contrast the structure and development of tentacles in the moon jellyfish, Aurelia species 1. We show that polyp oral tentacles and medusa marginal tentacles display markedly different cellular and muscular architecture, as well as distinct patterns of cellular proliferation during growth. Many structural differences between these tentacle types may reflect biomechanical solutions to different feeding strategies, although further work would be required for a precise mechanistic understanding. However, differences in cell proliferation dynamics suggests that the two tentacle forms lack a conserved mechanism of development, challenging the textbook-notion that cnidarian tentacles can be homologized into a conserved bauplan.
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Affiliation(s)
- David A. Gold
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Nagayasu Nakanishi
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Nicholai M. Hensley
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Kira Cozzolino
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Mariam Tabatabaee
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Michelle Martin
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
| | - Volker Hartenstein
- Department of Molecular, Cell, and Developmental Biology. University of California Los Angeles, Los Angeles, California, United States of America
| | - David K. Jacobs
- Department of Ecology and Evolutionary Biolology. University of California Los Angeles, Los Angeles, California, United States of America
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36
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Hoover A, Miller L. A numerical study of the benefits of driving jellyfish bells at their natural frequency. J Theor Biol 2015; 374:13-25. [DOI: 10.1016/j.jtbi.2015.03.016] [Citation(s) in RCA: 32] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Revised: 03/05/2015] [Accepted: 03/12/2015] [Indexed: 10/23/2022]
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37
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Katija K, Colin SP, Costello JH, Jiang H. Ontogenetic propulsive transitions by medusae Sarsia tubulosa. J Exp Biol 2015; 218:2333-43. [DOI: 10.1242/jeb.115832] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2014] [Accepted: 05/14/2015] [Indexed: 11/20/2022]
Abstract
While swimming in their natural environment, marine organisms must successfully forage, escape from predation, and search for mates to reproduce. In the process, planktonic organisms interact with their fluid environment, generating fluid signatures around their body and in their downstream wake through ontogeny. In the early stages of their life cycle, marine organisms operate in environments where viscous effects dominate and govern physical processes. Ontogenetic propulsive transitions in swimming organisms often involve dramatic changes in morphology and swimming behavior. However, for organisms that do not undergo significant changes in morphology, swimming behavior, or propulsive mode, how is their swimming performance affected?
We investigated the ontogenetic propulsive transitions of the hydromedusa Sarsia tubulosa, which utilizes jet propulsion and possesses similar bell morphology throughout its life cycle. We used digital particle image velocimetry and high-speed imaging to measure the body kinematics, velocity fields, and wake structures induced by swimming S. tubulosa from 1 mm to 10 mm bell exit diameters. Our experimental observations revealed three distinct classes of hydrodynamic wakes: elongated vortex rings for 10<Re<30 (1 to 2 mm bell exit diameter), classical elliptical vortex rings for Re>30 (larger than 2 mm bell exit diameter), and in most instances where Re>100 (larger than 4 or 5 mm bell exit diameter), elliptical vortex rings (or leading vortex rings) were followed by trailing jets. The relative travel distance and propulsive efficiency remained unchanged throughout ontogeny, and the swimming proficiency and hydrodynamic cost of transport decreased nonlinearly.
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Affiliation(s)
- Kakani Katija
- Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA
| | - Sean P. Colin
- Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
| | - John H. Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Biology Department, Providence College, Providence, RI 02819, USA
| | - Houshuo Jiang
- Applied Ocean Physics and Engineering, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA
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38
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Villanueva AA, Priya S. Cyanea capillata bell kinematics analysis through corrected in situ imaging and modeling using strategic discretization techniques. PLoS One 2014; 9:e115220. [PMID: 25541980 PMCID: PMC4277286 DOI: 10.1371/journal.pone.0115220] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2014] [Accepted: 11/20/2014] [Indexed: 11/18/2022] Open
Abstract
Obtaining accurate kinematic data of animals is essential for many biological studies and bio-inspired engineering. Many animals, however, are either too large or too delicate to transport to controlled environments where accurate kinematic data can be easily obtained. Often, in situ recordings are the only means available but are often subject to multi-axis motion and relative magnification changes with time leading to large discrepancies in the animal kinematics. Techniques to compensate for these artifacts were applied to a large jellyfish, Cyanea capillata, freely swimming in ocean waters. The bell kinematics were captured by digitizing exumbrella profiles for two full swimming cycles. Magnification was accounted for by tracking a reference point on the ocean floor and by observing the C. capillata exumbrella arclength in order to have a constant scale through the swimming cycles. A linear fit of the top bell section was used to find the body angle with respect to the camera coordinate system. Bell margin trajectories over two swimming cycles confirmed the accuracy of the correction techniques. The corrected profiles were filtered and interpolated to provide a set of time-dependent points along the bell. Discrete models of the exumbrella were used to analyze the bell kinematics. Exumbrella discretization was conducted using three different methods. Fourier series were fitted to the discretized models and subsequently used to analyze the bell kinematics of the C. capillata. The analysis showed that the bell did not deform uniformly over time with different segments lagging behind each other. Looping of the bell trajectory between contraction and relaxation was also present through most of the exumbrella. The bell margin had the largest looping with an outer path during contraction and inner path during relaxation. The subumbrella volume was approximated based on the exumbrella kinematics and was found to increase during contraction.
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Affiliation(s)
- Alex A. Villanueva
- Bio-inspired Materials and Devices Lab (BMDL), Center for Energy Harvesting Materials and Systems (CEHMS), Virginia Tech, Blacksburg, Virginia, United States of America
| | - Shashank Priya
- Bio-inspired Materials and Devices Lab (BMDL), Center for Energy Harvesting Materials and Systems (CEHMS), Virginia Tech, Blacksburg, Virginia, United States of America
- * E-mail:
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Chabreyrie R, Balaras E, Abdelaziz K, Kiger K. Lagrangian approach to understanding the origin of the gill-kinematics switch in mayfly nymphs. PHYSICAL REVIEW. E, STATISTICAL, NONLINEAR, AND SOFT MATTER PHYSICS 2014; 90:062701. [PMID: 25615123 DOI: 10.1103/physreve.90.062701] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2013] [Indexed: 06/04/2023]
Abstract
The mayfly nymph breathes under water through an oscillating array of plate-shaped tracheal gills. As the nymph grows, the kinematics of these gills change abruptly from rowing to flapping. The classical fluid dynamics approach to consider the mayfly nymph as a pumping device fails in giving clear reasons for this switch. In order to shed some light on this switch between the two distinct kinematics, we analyze the problem under a Lagrangian viewpoint. We consider that a good Lagrangian transport that effectively distributes and stirs water and dissolved oxygen between and around the gills is the main goal of the gill motion. Using this Lagrangian approach, we are able to provide possible reasons behind the observed switch from rowing to flapping. More precisely, we conduct a series of in silico mayfly nymph experiments, where body shape, as well as gill shapes, structures, and kinematics are matched to those from in vivo. In this paper, we show both qualitatively and quantitatively how the change of kinematics enables better attraction, confinement, and stirring of water charged of dissolved oxygen inside the gills area. We reveal the attracting barriers to transport, i.e., attracting Lagrangian coherent structures, that form the transport skeleton between and around the gills. In addition, we quantify how well the fluid particles are stirred inside the gills area, which by extension leads us to conclude that it will increase the proneness of molecules of dissolved oxygen to be close enough to the gills for extraction.
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Affiliation(s)
- R Chabreyrie
- Department of Mechanical and Aerospace Engineering, The George Washington University, Washington, D.C. 20052, USA
| | - E Balaras
- Department of Mechanical and Aerospace Engineering, The George Washington University, Washington, D.C. 20052, USA
| | - K Abdelaziz
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, USA
| | - K Kiger
- Department of Mechanical Engineering, University of Maryland, College Park, Maryland 20742, USA
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40
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Flexible margin kinematics and vortex formation of Aurelia aurita and Robojelly. PLoS One 2014; 9:e98310. [PMID: 24905025 PMCID: PMC4048192 DOI: 10.1371/journal.pone.0098310] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2013] [Accepted: 04/30/2014] [Indexed: 11/19/2022] Open
Abstract
The development of a rowing jellyfish biomimetic robot termed as “Robojelly”, has led to the discovery of a passive flexible flap located between the flexion point and bell margin on the Aurelia aurita. A comparative analysis of biomimetic robots showed that the presence of a passive flexible flap results in a significant increase in the swimming performance. In this work we further investigate this concept by developing varying flap geometries and comparing their kinematics with A. aurita. It was shown that the animal flap kinematics can be replicated with high fidelity using a passive structure and a flap with curved and tapered geometry gave the most biomimetic performance. A method for identifying the flap location was established by utilizing the bell curvature and the variation of curvature as a function of time. Flaps of constant cross-section and varying lengths were incorporated on the Robojelly to conduct a systematic study of the starting vortex circulation. Circulation was quantified using velocity field measurements obtained from planar Time Resolved Digital Particle Image Velocimetry (TRDPIV). The starting vortex circulation was scaled using a varying orifice model and a pitching panel model. The varying orifice model which has been traditionally considered as the better representation of jellyfish propulsion did not appear to capture the scaling of the starting vortex. In contrast, the pitching panel representation appeared to better scale the governing flow physics and revealed a strong dependence on the flap kinematics and geometry. The results suggest that an alternative description should be considered for rowing jellyfish propulsion, using a pitching panel method instead of the traditional varying orifice model. Finally, the results show the importance of incorporating the entire bell geometry as a function of time in modeling rowing jellyfish propulsion.
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Gemmell BJ, Costello JH, Colin SP. Exploring vortex enhancement and manipulation mechanisms in jellyfish that contributes to energetically efficient propulsion. Commun Integr Biol 2014; 7:e29014. [PMID: 25346796 PMCID: PMC4203578 DOI: 10.4161/cib.29014] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2013] [Revised: 04/23/2014] [Accepted: 04/24/2014] [Indexed: 11/19/2022] Open
Abstract
The ability of animals to propel themselves efficiently through a fluid medium is ecologically advantageous. Flexible components that influence vortex interactions are widespread among animal propulsors. However the mechanisms by which vortices are enhanced and appropriately positioned for thrust generation are still poorly understood. Here, we describe how kinematic propulsor movements of a jellyfish can enhance and reposition a vortex ring that allows the recapture of wake energy for secondary thrust generation and efficient locomotion. We use high-speed video and digital particle image velocimetry (DPIV) to resolve kinematics simultaneously with fluid structures. These results provide new insight into how animals can manipulate fluid structures to reduce metabolic energy demands of swimming muscles and may have implications in bio-inspired design.
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Affiliation(s)
- Brad J Gemmell
- Marine Biological Laboratory; Woods Hole, MA USA ; Providence College; Providence, RI USA
| | - John H Costello
- Marine Biological Laboratory; Woods Hole, MA USA ; Providence College; Providence, RI USA
| | - Sean P Colin
- Marine Biological Laboratory; Woods Hole, MA USA ; Roger Williams University; Bristol, RI USA
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42
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Ristroph L, Childress S. Stable hovering of a jellyfish-like flying machine. J R Soc Interface 2014; 11:20130992. [PMID: 24430122 PMCID: PMC3899867 DOI: 10.1098/rsif.2013.0992] [Citation(s) in RCA: 45] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2013] [Accepted: 12/18/2013] [Indexed: 11/12/2022] Open
Abstract
Ornithopters, or flapping-wing aircraft, offer an alternative to helicopters in achieving manoeuvrability at small scales, although stabilizing such aerial vehicles remains a key challenge. Here, we present a hovering machine that achieves self-righting flight using flapping wings alone, without relying on additional aerodynamic surfaces and without feedback control. We design, construct and test-fly a prototype that opens and closes four wings, resembling the motions of swimming jellyfish more so than any insect or bird. Measurements of lift show the benefits of wing flexing and the importance of selecting a wing size appropriate to the motor. Furthermore, we use high-speed video and motion tracking to show that the body orientation is stable during ascending, forward and hovering flight modes. Our experimental measurements are used to inform an aerodynamic model of stability that reveals the importance of centre-of-mass location and the coupling of body translation and rotation. These results show the promise of flapping-flight strategies beyond those that directly mimic the wing motions of flying animals.
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Affiliation(s)
- Leif Ristroph
- Applied Math Lab, Courant Institute, New York University, 251 Mercer St., New York, NY 10012, USA
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43
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Villanueva AA, Marut KJ, Michael T, Priya S. Biomimetic autonomous robot inspired by the Cyanea capillata (Cyro). BIOINSPIRATION & BIOMIMETICS 2013; 8:046005. [PMID: 24166747 DOI: 10.1088/1748-3182/8/4/046005] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
A biomimetic robot inspired by Cyanea capillata, termed as 'Cyro', was developed to meet the functional demands of underwater surveillance in defense and civilian applications. The vehicle was designed to mimic the morphology and swimming mechanism of the natural counterpart. The body of the vehicle consists of a rigid support structure with linear DC motors which actuate eight mechanical arms. The mechanical arms in conjunction with artificial mesoglea create the hydrodynamic force required for propulsion. The full vehicle measures 170 cm in diameter and has a total mass of 76 kg. An analytical model of the mechanical arm kinematics was developed. The analytical and experimental bell kinematics were analyzed and compared to the C. capillata. Cyro was found to reach the water surface untethered and autonomously from a depth of 182 cm in five actuation cycles. It achieved an average velocity of 8.47 cm s(-1) while consuming an average power of 70 W. A two-axis thrust stand was developed to calculate the thrust directly from a single bell segment yielding an average thrust of 27.9 N for the whole vehicle. Steady state velocity during Cyro's swimming test was not reached but the measured performance during its last swim cycle resulted in a cost of transport of 10.9 J (kg ⋅ m)(-1) and total efficiency of 0.03.
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Affiliation(s)
- Alex A Villanueva
- Bio-inspired Materials and Devices Lab (BMDL), Center for Energy Harvesting Materials and Systems (CEHMS), Virginia Tech, Blacksburg, VA 24061, USA
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Passive energy recapture in jellyfish contributes to propulsive advantage over other metazoans. Proc Natl Acad Sci U S A 2013; 110:17904-9. [PMID: 24101461 DOI: 10.1073/pnas.1306983110] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Gelatinous zooplankton populations are well known for their ability to take over perturbed ecosystems. The ability of these animals to outcompete and functionally replace fish that exhibit an effective visual predatory mode is counterintuitive because jellyfish are described as inefficient swimmers that must rely on direct contact with prey to feed. We show that jellyfish exhibit a unique mechanism of passive energy recapture, which is exploited to allow them to travel 30% further each swimming cycle, thereby reducing metabolic energy demand by swimming muscles. By accounting for large interspecific differences in net metabolic rates, we demonstrate, contrary to prevailing views, that the jellyfish (Aurelia aurita) is one of the most energetically efficient propulsors on the planet, exhibiting a cost of transport (joules per kilogram per meter) lower than other metazoans. We estimate that reduced metabolic demand by passive energy recapture improves the cost of transport by 48%, allowing jellyfish to achieve the large sizes required for sufficient prey encounters. Pressure calculations, using both computational fluid dynamics and a newly developed method from empirical velocity field measurements, demonstrate that this extra thrust results from positive pressure created by a vortex ring underneath the bell during the refilling phase of swimming. These results demonstrate a physical basis for the ecological success of medusan swimmers despite their simple body plan. Results from this study also have implications for bioinspired design, where low-energy propulsion is required.
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45
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Lucas K, Colin SP, Costello JH, Katija K, Klos E. Fluid interactions that enable stealth predation by the upstream-foraging hydromedusa Craspedacusta sowerbyi. THE BIOLOGICAL BULLETIN 2013; 225:60-70. [PMID: 24088797 DOI: 10.1086/bblv225n1p60] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/02/2023]
Abstract
Unlike most medusae that forage with tentacles trailing behind their bells, several species forage upstream of their bells using aborally located tentacles. It has been hypothesized that these medusae forage as stealth predators by placing their tentacles in more quiescent regions of flow around their bells. Consequently, they are able to capture highly mobile, sensitive prey. We used digital particle image velocimetry (DPIV) to quantitatively characterize the flow field around Craspedacusta sowerbyi, a freshwater upstream-foraging hydromedusa, to evaluate the mechanics of its stealth predation. We found that fluid velocities were minimal in front and along the sides of the bell where the tentacles are located. As a result, the deformation rates in the regions where the tentacles are located were low, below the threshold rates required to elicit an escape response in several species of copepods. Estimates of their encounter volume rates were examined on the basis of flow past the tentacles, and trade-offs associated with tentacle characteristics were evaluated.
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Affiliation(s)
- K Lucas
- Biology, Roger Williams University, Bristol, Rhode Island 02809
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46
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Katija K, Jiang H. Swimming by medusaeSarsia tubulosain the viscous vortex ring limit. ACTA ACUST UNITED AC 2013. [DOI: 10.1215/21573689-2338313] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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Colin SP, Costello JH, Katija K, Seymour J, Kiefer K. Propulsion in cubomedusae: mechanisms and utility. PLoS One 2013; 8:e56393. [PMID: 23437122 PMCID: PMC3577916 DOI: 10.1371/journal.pone.0056393] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/08/2012] [Accepted: 12/24/2012] [Indexed: 11/18/2022] Open
Abstract
Evolutionary constraints which limit the forces produced during bell contractions of medusae affect the overall medusan morphospace such that jet propulsion is limited to only small medusae. Cubomedusae, which often possess large prolate bells and are thought to swim via jet propulsion, appear to violate the theoretical constraints which determine the medusan morphospace. To examine propulsion by cubomedusae, we quantified size related changes in wake dynamics, bell shape, swimming and turning kinematics of two species of cubomedusae, Chironex fleckeri and Chiropsella bronzie. During growth, these cubomedusae transitioned from using jet propulsion at smaller sizes to a rowing-jetting hybrid mode of propulsion at larger sizes. Simple modifications in the flexibility and kinematics of their velarium appeared to be sufficient to alter their propulsive mode. Turning occurs during both bell contraction and expansion and is achieved by generating asymmetric vortex structures during both stages of the swimming cycle. Swimming characteristics were considered in conjunction with the unique foraging strategy used by cubomedusae.
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Affiliation(s)
- Sean P Colin
- Marine Biology and Environmental Science, Roger Williams University, Bristol, Rhode Island, USA.
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A tissue-engineered jellyfish with biomimetic propulsion. Nat Biotechnol 2013; 30:792-7. [PMID: 22820316 DOI: 10.1038/nbt.2269] [Citation(s) in RCA: 315] [Impact Index Per Article: 28.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2011] [Accepted: 05/14/2012] [Indexed: 12/11/2022]
Abstract
Reverse engineering of biological form and function requires hierarchical design over several orders of space and time. Recent advances in the mechanistic understanding of biosynthetic compound materials, computer-aided design approaches in molecular synthetic biology 4,5 and traditional soft robotics, and increasing aptitude in generating structural and chemical micro environments that promote cellular self-organization have enhanced the ability to recapitulate such hierarchical architecture in engineered biological systems. Here we combined these capabilities in a systematic design strategy to reverse engineer a muscular pump. We report the construction of a freely swimming jellyfish from chemically dissociated rat tissue and silicone polymer as a proof of concept. The constructs, termed 'medusoids', were designed with computer simulations and experiments to match key determinants of jellyfish propulsion and feeding performance by quantitatively mimicking structural design, stroke kinematics and animal-fluid interactions. The combination of the engineering design algorithm with quantitative benchmarks of physiological performance suggests that our strategy is broadly applicable to reverse engineering of muscular organs or simple life forms that pump to survive.
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Nawroth JC, Parker KK. Design standards for engineered tissues. Biotechnol Adv 2012; 31:632-7. [PMID: 23267860 DOI: 10.1016/j.biotechadv.2012.12.005] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2012] [Revised: 12/12/2012] [Accepted: 12/14/2012] [Indexed: 11/16/2022]
Abstract
Traditional technologies are required to meet specific, quantitative standards of safety and performance. In tissue engineering, similar standards will have to be developed to enable routine clinical use and customized tissue fabrication. In this essay, we discuss a framework of concepts leading towards general design standards for tissue-engineering, focusing in particular on systematic design strategies, control of cell behavior, physiological scaling, fabrication modes and functional evaluation.
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Affiliation(s)
- Janna C Nawroth
- Division of Biology, California Institute of Technology, Pasadena, CA 91125, USA.
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Colin SP, Costello JH, Dabiri JO, Villanueva A, Blottman JB, Gemmell BJ, Priya S. Biomimetic and live medusae reveal the mechanistic advantages of a flexible bell margin. PLoS One 2012; 7:e48909. [PMID: 23145016 PMCID: PMC3492145 DOI: 10.1371/journal.pone.0048909] [Citation(s) in RCA: 36] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2012] [Accepted: 10/08/2012] [Indexed: 11/29/2022] Open
Abstract
Flexible bell margins are characteristic components of rowing medusan morphologies and are expected to contribute towards their high propulsive efficiency. However, the mechanistic basis of thrust augmentation by flexible propulsors remained unresolved, so the impact of bell margin flexibility on medusan swimming has also remained unresolved. We used biomimetic robotic jellyfish vehicles to elucidate that propulsive thrust enhancement by flexible medusan bell margins relies upon fluid dynamic interactions between entrained flows at the inflexion point of the exumbrella and flows expelled from under the bell. Coalescence of flows from these two regions resulted in enhanced fluid circulation and, therefore, thrust augmentation for flexible margins of both medusan vehicles and living medusae. Using particle image velocimetry (PIV) data we estimated pressure fields to demonstrate a mechanistic basis of enhanced flows associated with the flexible bell margin. Performance of vehicles with flexible margins was further enhanced by vortex interactions that occur during bell expansion. Hydrodynamic and performance similarities between robotic vehicles and live animals demonstrated that the propulsive advantages of flexible margins found in nature can be emulated by human-engineered propulsors. Although medusae are simple animal models for description of this process, these results may contribute towards understanding the performance of flexible margins among other animal lineages.
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Affiliation(s)
- Sean P Colin
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, Rhode Island, USA.
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