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Storey JM, Li Z, Storey KB. Hypoxia inducible factor-1α responds to freezing, anoxia and dehydration stresses in a freeze-tolerant frog. Cryobiology 2023; 110:79-85. [PMID: 36442660 DOI: 10.1016/j.cryobiol.2022.11.242] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2022] [Revised: 11/24/2022] [Accepted: 11/24/2022] [Indexed: 11/27/2022]
Abstract
The wood frog, Rana sylvatica (aka Lithobates sylvaticus) is the main model for studies of natural freeze tolerance among amphibians living in seasonally cold climates. During freezing, ∼65% of total body water can be converted to extracellular ice and this imposes both dehydration and hypoxia/anoxia stresses on cells. The current study analyzed the responses of the alpha subunit of the hypoxia-inducible transcription factor (HIF-1), a crucial oxygen-sensitive regulator of gene expression, to freezing, anoxia or dehydration stresses, examining six tissues of wood frogs (liver, skeletal muscle, brain, heart, kidney, skin). RT-PCR revealed a rapid elevation hif-1α transcript levels within 2 h of freeze initiation in both liver and brain and elevated levels of both mRNA and protein in liver and muscle after 24 h frozen. However, both transcript and protein levels reverted to control values after thawing except for HIF-1 protein in liver that dropped to ∼60% of control. Independent exposures of wood frogs to anoxia or dehydration stresses (two components of freezing) also triggered upregulation of hif-1α transcripts and/or HIF-1α protein in liver and kidney with variable responses in other tissues. The results show active modulation of HIF-1 in response to freezing, anoxia and dehydration stresses and implicate this transcription factor as a contributor to the regulation of metabolic adaptations needed for long term survival of wood frogs in the ischemic frozen state.
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Affiliation(s)
- Janet M Storey
- Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, K1S 5B6, Canada
| | - Zhenhong Li
- Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, K1S 5B6, Canada
| | - Kenneth B Storey
- Department of Biology, Carleton University, 1125 Colonel By Drive, Ottawa, K1S 5B6, Canada.
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Transcriptome reveals the important role of metabolic imbalances, immune disorders and apoptosis in the treatment of Procambarus clarkii at super high temperature. COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2020; 37:100781. [PMID: 33316578 DOI: 10.1016/j.cbd.2020.100781] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 10/18/2020] [Accepted: 11/24/2020] [Indexed: 01/03/2023]
Abstract
Temperature is an important environmental factor in the living environment of crustaceans. Changes in temperature can affect their normal growth and metabolism and even cause bacterial disease. Currently, the potential anti-reverse molecular reaction mechanism of crustaceans during high-temperature conditions has not yet been fully understood. Therefore, in this study, we characterised the transcriptome of Procambarus clarkii using RNA sequencing and performed a comparison between super-high-temperature treated samples and controls. After assembly and annotation, 81,097 unigenes with an average length of 069 bp and 358 differentially expressed genes (DEGs) were identified. Among these DEGs, 264 were differentially upregulated and 94 were differentially downregulated. To obtain comprehensive gene function information, we queried seven databases, namely, Nr, Nt, Pfam, KOG, Swiss-Prot, KEGG, and GO to annotate gene functions. Transcriptome analysis revealed that the identified DEGs have significant effects on immune-related pathways, including lysosomal and phagosomal pathways, and that super-high-temperature conditions can cause disease in P. clarkii. Some significantly downregulated genes are involved in oxidative phosphorylation and the PPAR signalling pathway; this suggests a metabolic imbalance in P. clarkia during extreme temperature conditions. In addition, elevated temperature changed the expression patterns of key apoptosis genes XIAP, CASP2, CASP2, CASP8, and CYTC, thereby confirming that high-temperature conditions caused immune disorders, metabolic imbalance, and, finally, triggered apoptosis. Our results provide a useful foundation for understanding the molecular mechanisms underlying the responses of P. clarkii during high-temperature conditions.
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Giannetto A, Maisano M, Cappello T, Oliva S, Parrino V, Natalotto A, De Marco G, Barberi C, Romeo O, Mauceri A, Fasulo S. Hypoxia-Inducible Factor α and Hif-prolyl Hydroxylase Characterization and Gene Expression in Short-Time Air-Exposed Mytilus galloprovincialis. MARINE BIOTECHNOLOGY (NEW YORK, N.Y.) 2015; 17:768-781. [PMID: 26277612 DOI: 10.1007/s10126-015-9655-7] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/05/2015] [Accepted: 07/02/2015] [Indexed: 06/04/2023]
Abstract
Aquatic organisms experience environmental hypoxia as a result of eutrophication and naturally occurring tidal cycles. Mytilus galloprovincialis, being an anoxic/hypoxic-tolerant bivalve, provides an excellent model to investigate the molecular mechanisms regulating oxygen sensing. Across the animal kingdom, inadequacy in oxygen supply is signalled predominantly by hypoxia-inducible factors (HIF) and Hif-prolyl hydroxylases (PHD). In this study, hif-α 5'-end and partial phd mRNA sequences from M. galloprovincialis were obtained. Phylogenetic and molecular characterization of both HIF-α and PHD putative proteins showed shared key features with the respective orthologues from animals strongly suggesting their crucial involvement in the highly conserved oxygen sensing pathway. Both transcripts displayed a tissue-specific distribution with prominent expression in gills. Quantitative gene expression analysis of hif-α and phd mRNAs from gills of M. galloprovincialis demonstrated that both these key sensors are transcriptionally modulated by oxygen availability during the short-time air exposure and subsequent re-oxygenation treatments proving that they are critical players of oxygen-sensing mechanisms in mussels. Remarkably, hif-α gene expression showed a prompt and transient response suggesting the precocious implication of this transcription factor in the early phase of the adaptive response to hypoxia in Mytilus. HIF-α and PHD proteins were modulated in a time-dependent manner with trends comparable to mRNA expression patterns, thus suggesting a central role of their transcriptional regulation in the hypoxia tolerance strategies in marine bivalves. These results provide molecular information about the effects of oxygen deficiency and identify hypoxia-responsive biomarker genes in mussels applicable in ecotoxicological studies of natural marine areas.
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Affiliation(s)
- Alessia Giannetto
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy.
| | - Maria Maisano
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Tiziana Cappello
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Sabrina Oliva
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Vincenzo Parrino
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Antonino Natalotto
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Giuseppe De Marco
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Chiara Barberi
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Orazio Romeo
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Angela Mauceri
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
| | - Salvatore Fasulo
- Department of Biological and Environmental Sciences, University of Messina, 98166, Messina, Italy
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Falfushynska H, Gnatyshyna L, Fedoruk O, Mitina N, Zaichenko A, Stoliar O, Stoika R. Hepatic metallothioneins in molecular responses to cobalt, zinc, and their nanoscale polymeric composites in frog Rana ridibunda. Comp Biochem Physiol C Toxicol Pharmacol 2015; 172-173:45-56. [PMID: 25988936 DOI: 10.1016/j.cbpc.2015.04.006] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/25/2015] [Revised: 04/29/2015] [Accepted: 04/29/2015] [Indexed: 12/20/2022]
Abstract
Despite numerous studies suggesting a dramatic decline of amphibians, the biochemical mechanisms of adaptation in these animals to polluted environment are poorly studied. The aim of this study was to elucidate the ability to release cobalt (Co) and zinc (Zn) from their nanoscale complexes (NCs) derived from the polymeric substance of N-vinylpyrrolidone (PS) in the liver of amphibian (Rana ridibunda). Frog males were subjected to 14days exposure to waterborne Co(2+) (50μg/L), Zn(2+) (100μg/L), as well as corresponding concentrations of Co-NC, Zn-NC or PS. Main attention was paid to MT's interrelations with indices of stress and toxicity. Only Co(2+) and Zn(2+) caused elevation of the correspondent metal in MTs. Co(2+) caused down-regulation of cathepsin D activity, while Zn(2+), Zn-NC and the PS up-regulated this activity. Zn(2+) provoked 1.6 times increase of metal-bounded form of the MT (MT-Me), while all other exposures caused the elevation of the ratio of MT total protein concentration (MT-SH) and concentrations of the MT-Me and/or immunoreactive (MTi) form (up to ~10 times) accompanied by a decrease in the levels of oxyradicals. The increased DNA fragmentation and down-regulation of caspase-3 activity in relation to the redox state of glutathione and/or lactate/pyruvate were shown at all exposures. These data indicate the vulnerability of the redox state of cellular thiols and inability to release Co and Zn from NCs in frog's liver.
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Affiliation(s)
- Halina Falfushynska
- Ternopil National Pedagogical University (TNPU), Ternopil, Ukraine; I.Ya. Horbachevsky Ternopil State Medical University, Ternopil, Ukraine
| | - Lesya Gnatyshyna
- Ternopil National Pedagogical University (TNPU), Ternopil, Ukraine
| | - Olga Fedoruk
- Ternopil National Pedagogical University (TNPU), Ternopil, Ukraine
| | - Natalia Mitina
- Lviv National Polytechnic University (LNPU), Lviv, Ukraine
| | | | - Oksana Stoliar
- Ternopil National Pedagogical University (TNPU), Ternopil, Ukraine
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Liu CC, Shin PKS, Cheung SG. Isolation and mRNA expression of hypoxia-inducible factor α (HIF-α) in two sublittoral nassariid gastropods: Nassarius siquijorensis and Nassarius conoidalis. MARINE ENVIRONMENTAL RESEARCH 2014; 99:44-51. [PMID: 24980608 DOI: 10.1016/j.marenvres.2014.05.012] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/30/2013] [Revised: 05/26/2014] [Accepted: 05/28/2014] [Indexed: 06/03/2023]
Abstract
Hypoxia-inducible factor (HIF) is commonly found in vertebrates as an adaptation against hypoxia. In this study, partial sequences of HIF were first reported for subtidal nassariid gastropods, Nassarius siquijorensis and Nassarius conoidalis. The phylogenetic tree of HIF-α among various animal groups was inferred. Adults of both N. siquijorensis and N. conoidalis were exposed to 24 h and 1 week hypoxia (1.5 mg O2 l(-1)) and the change of HIF-α mRNA level was determined in gill, foot muscle and hepatopancreas by using quantitative real-time PCR. The expression profile of HIF-α was also investigated in veliger larvae after 1 and 24 h hypoxia exposure. The HIF-α mRNA from gills of N. siquijorensis was 2.22-fold elevated after 24 h of exposure but returned back to the baseline level after 1 week of exposure. In contrast to N. siquijorensis, both short-term and long-term exposure to hypoxia significantly enhanced the mRNA level of HIF-α in the gill of N. conoidalis. Both 24 h and 1 week of exposure resulted in a significantly higher degree of expression of mRNA of HIF-α in the foot muscle of N. siquijorensis and N. conoidalis. For hepatopancreas, the mRNA level of HIF-α remained unchanged in N. siquijorensis after both 24 h and 1 week of exposure to hypoxia but a significant enhancement was observed in N. conoidalis after 1 week of exposure to hypoxia. The mRNA level of HIF-α significantly reduced after 24 h of exposure to hypoxia in the larvae of N. siquijorensis. The different expression patterns of HIF-α mRNA between the two species reflected their different adaptation abilities to hypoxia, which will further explain the differences in the distribution of these species in Hong Kong waters with N. siquijorensis being predominant in regions suffered from summer hypoxia.
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Affiliation(s)
- C C Liu
- Department of Biology and Chemistry, City University of Hong Kong, Kowloon, Hong Kong.
| | - P K S Shin
- Department of Biology and Chemistry, City University of Hong Kong, Kowloon, Hong Kong; State Key Laboratory of Marine Pollution, City University of Hong Kong, Kowloon, Hong Kong
| | - S G Cheung
- Department of Biology and Chemistry, City University of Hong Kong, Kowloon, Hong Kong; State Key Laboratory of Marine Pollution, City University of Hong Kong, Kowloon, Hong Kong
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Sørensen JG, Loeschcke V, Merilä J, Laurila A. Effects of predator exposure on Hsp70 expression and survival in tadpoles of the Common Frog (Rana temporaria). CAN J ZOOL 2011. [DOI: 10.1139/z11-105] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Predator-induced changes in prey behavior and morphology are widespread, but little is known about physiological and cellular-level responses in prey in response to predation risk. We investigated whether predator (larvae of the dragonfly Aeshna Fabricius, 1775) presence elevated the expression level of heat-shock protein 70 (Hsp70)—a commonly found response to stress—in tadpoles of the Common Frog ( Rana temporaria L., 1758). In another experiment, we tested the survival of tadpoles in the presence of a free-ranging predator. Prior to this encounter, the tadpoles were exposed to either an Hsp-inducing environmental stress in the form of heat (31 °C) or to predator cues from a caged predator. We found no evidence for increased Hsp70 expression in tadpoles either in the presence of fed or starved predators. We did not find any effects of prior exposure to neither heat nor predator presence on survival at the end of experiment. Our results do not point to either Hsp70-mediated effect of predator-induced responses or to beneficial effects of the stress response on survival under predation risk.
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Affiliation(s)
- Jesper Givskov Sørensen
- Department of Bioscience, Aarhus University, Vejlsøvej 25, P.O. Box 314, DK-8600 Silkeborg, Denmark
| | - Volker Loeschcke
- Aarhus Centre of Environmental Stress Research (ACES), Department of Bioscience, Aarhus University, Ny Munkegade 114-116, Building 1540, DK-8000 Aarhus C, Denmark
| | - Juha Merilä
- Ecological Genetics Research Unit, Department of Biosciences, P.O. Box 65, University of Helsinki, FI-00014 Helsinki, Finland
| | - Anssi Laurila
- Population and Conservation Biology and Department of Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyvägen 18D, SE-75236 Uppsala, Sweden
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Piontkivska H, Chung JS, Ivanina AV, Sokolov EP, Techa S, Sokolova IM. Molecular characterization and mRNA expression of two key enzymes of hypoxia-sensing pathways in eastern oysters Crassostrea virginica (Gmelin): hypoxia-inducible factor α (HIF-α) and HIF-prolyl hydroxylase (PHD). COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS 2010; 6:103-14. [PMID: 21106446 DOI: 10.1016/j.cbd.2010.10.003] [Citation(s) in RCA: 30] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2010] [Revised: 10/25/2010] [Accepted: 10/25/2010] [Indexed: 01/09/2023]
Abstract
Oxygen homeostasis is crucial for development, survival and normal function of all metazoans. A family of transcription factors called hypoxia-inducible factors (HIF) is critical in mediating the adaptive responses to reduced oxygen availability. The HIF transcription factor consists of a constitutively expressed β subunit and an oxygen-dependent α subunit; the abundance of the latter determines the activity of HIF and is regulated by a family of O(2)- and Fe(2+)-dependent enzymes prolyl hydroxylases (PHDs). Currently very little is known about the function of this important pathway and the molecular structure of its key players in hypoxia-tolerant intertidal mollusks including oysters, which are among the animal champions of anoxic and hypoxic tolerance and thus can serve as excellent models to study the role of HIF cascade in adaptations to oxygen deficiency. We have isolated transcripts of two key components of the oxygen sensing pathway - the oxygen-regulated HIF-α subunit and PHD - from an intertidal mollusk, the eastern oyster Crassostrea virginica, and determined the transcriptional responses of these two genes to anoxia, hypoxia and cadmium (Cd) stress. HIF-α and PHD homologs from eastern oysters C. virginica show significant sequence similarity and share key functional domains with the earlier described isoforms from vertebrates and invertebrates. Phylogenetic analysis shows that genetic diversification of HIF and PHD isoforms occurred within the vertebrate lineage indicating functional diversification and specialization of the oxygen-sensing pathways in this group, which parallels situation observed for many other important genes. HIF-α and PHD homologs are broadly expressed at the mRNA level in different oyster tissues and show transcriptional responses to prolonged hypoxia in the gills consistent with their putative role in oxygen sensing and the adaptive response to hypoxia. Similarity in amino acid sequence, domain structure and transcriptional responses between HIF-α and PHD homologs from oysters and other invertebrate and vertebrate species implies the highly conserved functions of these genes throughout the evolutionary history of animals, in accordance with their critical role in oxygen sensing and homeostasis.
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Affiliation(s)
- Helen Piontkivska
- Department of Biological Sciences, Kent State University, OH 44242-0001, USA.
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Heikkila JJ. Heat shock protein gene expression and function in amphibian model systems. Comp Biochem Physiol A Mol Integr Physiol 2010; 156:19-33. [DOI: 10.1016/j.cbpa.2010.01.024] [Citation(s) in RCA: 55] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2009] [Revised: 01/26/2010] [Accepted: 01/29/2010] [Indexed: 12/22/2022]
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Multifaceted role of heat shock protein 70 in neurons. Mol Neurobiol 2010; 42:114-23. [PMID: 20354811 DOI: 10.1007/s12035-010-8116-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2009] [Accepted: 03/15/2010] [Indexed: 12/22/2022]
Abstract
Heat shock protein 70 (Hsp70) plays important roles in neural protection from stress by assisting cellular protein folding. In this review we discuss the current understanding of inducible and constitutive Hsp70 in maintaining and protecting neuronal synaptic function under normal and stressed conditions.
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Complex patterns of geographic variation in heat tolerance and Hsp70 expression levels in the common frog Rana temporaria. J Therm Biol 2009. [DOI: 10.1016/j.jtherbio.2008.10.004] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022]
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