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Chang Y, Yang B, Zhang Y, Dong C, Liu L, Zhao X, Wang G. Identification of sex-biased and neurodevelopment genes via brain transcriptome in Ostrinia furnacalis. Front Physiol 2022; 13:953538. [PMID: 36003649 PMCID: PMC9393524 DOI: 10.3389/fphys.2022.953538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 07/01/2022] [Indexed: 11/16/2022] Open
Abstract
Insect brains play important roles in the regulation of sex-biased behaviors such as mating and oviposition. The neural structure and function of brain differences between males and females have been identified, in which the antenna lobes (AL) showed the most discrepancy, however, the whole repertoire of the genes expressed in the brains and the molecular mechanism of neural signaling and structural development are still unclear. In this study, high-throughput transcriptome analysis of male and female brains was carried on in the Asia corn borer, Ostrinia furnacalis, and a total of 39.23 Gb data and 34,092 unigenes were obtained. Among them, 276 genes displayed sex-biased expression by DEG analysis, of which 125 genes were highly expressed in the males and 151 genes were highly expressed in the females. Besides, by homology analysis against genes that have been confirmed to be related to brain neurodevelopment, a total of 24 candidate genes were identified in O. furnacalis. In addition, to further screen the core genes that may be important for sex-biased nerve signaling and neurodevelopment, protein-protein interaction networks were constructed for the sex-biased genes and neurodevelopment genes. We identified 10 (Mhc, Mlc1, Mlc2, Prm, Mf, wupA, TpnC25D, fln, l(2)efl, and Act5C), 11 (PPO2, GNBP3, Spn77Ba, Ppn, yellow-d2, PGRP-LB, PGRP-SD, PGRP-SC2, Hml, Cg25C, and vkg) and 8 (dac, wg, hh, ci, run, Lim1, Rbp9, and Bx) core hub genes that may be related to brain neural development from male-biased, female-biased, and neurodevelopment gene groups. Our results provide a reference for further analysis of the dimorphism of male and female brain structures in agricultural pests.
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Affiliation(s)
- Yajun Chang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- Department of Entomology, College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Bin Yang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Guirong Wang, ; Bin Yang,
| | - Yu Zhang
- Key Laboratory of Biohazard Monitoring, Green Prevention and Control for Artificial Grassland, Ministry of Agriculture and Rural Affairs, Institute of Grassland Research of Chinese Academy of Agricultural Sciences, Hohhot, China
| | - Chenxi Dong
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Lei Liu
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
| | - Xincheng Zhao
- Department of Entomology, College of Plant Protection, Henan Agricultural University, Zhengzhou, China
| | - Guirong Wang
- State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing, China
- *Correspondence: Guirong Wang, ; Bin Yang,
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Miller SE, Legan AW, Uy FMK, Sheehan MJ. Highly contiguous genome assemblies of the Guinea paper wasp (Polistes exclamans) and Mischocyttarus mexicanus. Genome Biol Evol 2022; 14:6649880. [PMID: 35880292 PMCID: PMC9346566 DOI: 10.1093/gbe/evac110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 07/13/2022] [Indexed: 12/01/2022] Open
Abstract
Paper wasps are a model system for the study of social evolution due to a high degree of inter- and intraspecific variation in cooperation, aggression, and visual signals of social status. Increasing the taxonomic coverage of genomic resources for this diverse clade will aid comparative genomic approaches for testing predictions about the molecular basis of social evolution. Here, we provide draft genome assemblies for two well-studied species of paper wasps, Polistes exclamans and Mischocyttarus mexicanus. The P. exclamans genome assembly is 221.5 Mb in length with a scaffold N50 of 4.11 Mb. The M. mexicanus genome assembly is 227 Mb in length with a scaffold N50 of 1.1 Mb. Genomes have low repeat content (9.54–10.75%) and low GC content (32.06–32.4%), typical of other social hymenopteran genomes. The DNA methyltransferase gene, Dnmt3 , was lost early in the evolution of Polistinae. We identified a second independent loss of Dnmt3 within hornets (genus: Vespa).
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Affiliation(s)
- Sara E Miller
- Cornell University, Department of Neurobiology and Behavior, Ithaca, NY, USA
| | - Andrew W Legan
- Cornell University, Department of Neurobiology and Behavior, Ithaca, NY, USA
| | - Floria M K Uy
- University of Rochester, Department of Biology, Rochester, NY, USA
| | - Michael J Sheehan
- Cornell University, Department of Neurobiology and Behavior, Ithaca, NY, USA
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Uy FMK, Jernigan CM, Zaba NC, Mehrotra E, Miller SE, Sheehan MJ. Dynamic neurogenomic responses to social interactions and dominance outcomes in female paper wasps. PLoS Genet 2021; 17:e1009474. [PMID: 34478434 PMCID: PMC8415593 DOI: 10.1371/journal.pgen.1009474] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2021] [Accepted: 08/03/2021] [Indexed: 11/19/2022] Open
Abstract
Social interactions have large effects on individual physiology and fitness. In the immediate sense, social stimuli are often highly salient and engaging. Over longer time scales, competitive interactions often lead to distinct social ranks and differences in physiology and behavior. Understanding how initial responses lead to longer-term effects of social interactions requires examining the changes in responses over time. Here we examined the effects of social interactions on transcriptomic signatures at two times, at the end of a 45-minute interaction and 4 hours later, in female Polistes fuscatus paper wasp foundresses. Female P. fuscatus have variable facial patterns that are used for visual individual recognition, so we separately examined the transcriptional dynamics in the optic lobe and the non-visual brain. Results demonstrate much stronger transcriptional responses to social interactions in the non-visual brain compared to the optic lobe. Differentially regulated genes in response to social interactions are enriched for memory-related transcripts. Comparisons between winners and losers of the encounters revealed similar overall transcriptional profiles at the end of an interaction, which significantly diverged over the course of 4 hours, with losers showing changes in expression levels of genes associated with aggression and reproduction in paper wasps. On nests, subordinate foundresses are less aggressive, do more foraging and lay fewer eggs compared to dominant foundresses and we find losers shift expression of many genes in the non-visual brain, including vitellogenin, related to aggression, worker behavior, and reproduction within hours of losing an encounter. These results highlight the early neurogenomic changes that likely contribute to behavioral and physiological effects of social status changes in a social insect.
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Affiliation(s)
- Floria M. K. Uy
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
| | - Christopher M. Jernigan
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
| | - Natalie C. Zaba
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
| | - Eshan Mehrotra
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
| | - Sara E. Miller
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
| | - Michael J. Sheehan
- Laboratory for Animal Social Evolution and Recognition, Department of Neurobiology and Behavior, Cornell University, Ithaca, New York, United States of America
- * E-mail:
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Li L, Su S, Perry CJ, Elphick MR, Chittka L, Søvik E. Large-scale transcriptome changes in the process of long-term visual memory formation in the bumblebee, Bombus terrestris. Sci Rep 2018; 8:534. [PMID: 29323174 PMCID: PMC5765018 DOI: 10.1038/s41598-017-18836-3] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2017] [Accepted: 12/14/2017] [Indexed: 01/05/2023] Open
Abstract
Many genes have been implicated in mechanisms of long-term memory formation, but there is still much to be learnt about how the genome dynamically responds, transcriptionally, during memory formation. In this study, we used high-throughput sequencing to examine how transcriptome profiles change during visual memory formation in the bumblebee (Bombus terrestris). Expression of fifty-five genes changed immediately after bees were trained to associate reward with a single coloured chip, and the upregulated genes were predominantly genes known to be involved in signal transduction. Changes in the expression of eighty-one genes were observed four hours after learning a new colour, and the majority of these were upregulated and related to transcription and translation, which suggests that the building of new proteins may be the predominant activity four hours after training. Several of the genes identified in this study (e.g. Rab10, Shank1 and Arhgap44) are interesting candidates for further investigation of the molecular mechanisms of long-term memory formation. Our data demonstrate the dynamic gene expression changes after associative colour learning and identify genes involved in each transcriptional wave, which will be useful for future studies of gene regulation in learning and long-term memory formation.
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Affiliation(s)
- Li Li
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK.
| | - Songkun Su
- College of Bee Science, Fujian Agriculture and Forestry University, Fuzhou, 350002, China.
| | - Clint J Perry
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
| | - Maurice R Elphick
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
| | - Lars Chittka
- School of Biological and Chemical Sciences, Queen Mary University of London, London, E1 4NS, UK
- Institute for Advanced Study, Wallotstrasse 19, D-14193, Berlin, Germany
| | - Eirik Søvik
- Department of Science and Mathematics, Volda University College, 6100, Volda, Norway
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Wolff GH, Thoen HH, Marshall J, Sayre ME, Strausfeld NJ. An insect-like mushroom body in a crustacean brain. eLife 2017; 6:29889. [PMID: 28949916 PMCID: PMC5614564 DOI: 10.7554/elife.29889] [Citation(s) in RCA: 38] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2017] [Accepted: 08/25/2017] [Indexed: 01/02/2023] Open
Abstract
Mushroom bodies are the iconic learning and memory centers of insects. No previously described crustacean possesses a mushroom body as defined by strict morphological criteria although crustacean centers called hemiellipsoid bodies, which serve functions in sensory integration, have been viewed as evolutionarily convergent with mushroom bodies. Here, using key identifiers to characterize neural arrangements, we demonstrate insect-like mushroom bodies in stomatopod crustaceans (mantis shrimps). More than any other crustacean taxon, mantis shrimps display sophisticated behaviors relating to predation, spatial memory, and visual recognition comparable to those of insects. However, neuroanatomy-based cladistics suggesting close phylogenetic proximity of insects and stomatopod crustaceans conflicts with genomic evidence showing hexapods closely related to simple crustaceans called remipedes. We discuss whether corresponding anatomical phenotypes described here reflect the cerebral morphology of a common ancestor of Pancrustacea or an extraordinary example of convergent evolution. With more than four million species, arthropods are the largest and most diverse group of animals on the planet and include, for example, crustaceans, insects and spiders. They are defined by their segmented bodies, hard outer skeletons and jointed limbs. All arthropods share a common ancestor that lived more than 550 million years ago. Exactly how this ancestral arthropod gave rise to the myriad species that exist today is unclear but we know that at some point the arthropod family tree split into branches, one of which went on to become the crustaceans. The crustacean branch then split again, giving rise to a line of descendants that would become the insects. But although insects evolved from crustaceans, the brains of insects possess structures that those of crustaceans do not. Known as mushroom bodies, these structures help to form and store memories. Their absence in crustaceans has therefore been an enduring mystery. Wolff et al. now add a piece to the puzzle by showing that one group of modern-day crustaceans, the mantis shrimps, does in fact possess mushroom bodies. By visualizing cells and pathways within the brains of mantis shrimps, and also a number of closely related species, Wolff et al. show that only these shrimps possess true mushroom bodies. However, some of the mantis shrimp’s close relatives possess a few attributes of these structures. This suggests that mushroom bodies are evolutionarily ancient structures that arose in a common ancestor of insects and crustaceans, before being lost or radically modified in most of the crustaceans. So why did this happen? Mantis shrimps are top predators with excellent vision that hunt over considerable distances, requiring them to evaluate and memorize complex features of their environment. These cognitive demands, which might not be shared by other crustaceans, may have led to the mantis shrimps retaining their mushroom bodies. Further research into the brains and behavior of the mantis shrimp may provide insights into how mushroom bodies construct memories of a complex sensory world.
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Affiliation(s)
| | | | - Justin Marshall
- Sensory Neurobiology Group, University of Queensland, Brisbane, Australia
| | - Marcel E Sayre
- Department of Neuroscience, School of Mind, Brain and Behavior, University of Arizona, Tucson, United States
| | - Nicholas James Strausfeld
- Department of Neuroscience, School of Mind, Brain and Behavior, University of Arizona, Tucson, United States
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Knight K. Paper wasps really recognise each other's faces. J Exp Biol 2017. [DOI: 10.1242/jeb.163477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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