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Baldwin T, Battista NA. Hopscotching jellyfish: combining different duty cycle kinematics can lead to enhanced swimming performance. BIOINSPIRATION & BIOMIMETICS 2021; 16:066021. [PMID: 34584025 DOI: 10.1088/1748-3190/ac2afe] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Accepted: 09/28/2021] [Indexed: 06/13/2023]
Abstract
Jellyfish (Medusozoa) have been deemed the most energy-efficient animals in the world. Their bell morphology and relatively simple nervous systems make them attractive to robotocists. Although, the science community has devoted much attention to understanding their swimming performance, there is still much to be learned about the jet propulsive locomotive gait displayed by prolate jellyfish. Traditionally, computational scientists have assumed uniform duty cycle kinematics when computationally modeling jellyfish locomotion. In this study we used fluid-structure interaction modeling to determine possible enhancements in performance from shuffling different duty cycles together across multiple Reynolds numbers and contraction frequencies. Increases in speed and reductions in cost of transport were observed as high as 80% and 50%, respectively. Generally, the net effects were greater for cases involving lower contraction frequencies. Overall, robust duty cycle combinations were determined that led to enhanced or impeded performance.
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Affiliation(s)
- Tierney Baldwin
- Department of Mathematics and Statistics, The College of New Jersey, 2000 Pennington Road, Ewing Township, NJ 08628, United States of America
| | - Nicholas A Battista
- Department of Mathematics and Statistics, The College of New Jersey, 2000 Pennington Road, Ewing Township, NJ 08628, United States of America
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2
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Gemmell BJ, Dabiri JO, Colin SP, Costello JH, Townsend JP, Sutherland KR. Cool your jets: biological jet propulsion in marine invertebrates. J Exp Biol 2021; 224:269180. [PMID: 34137893 DOI: 10.1242/jeb.222083] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
Abstract
Pulsatile jet propulsion is a common swimming mode used by a diverse array of aquatic taxa from chordates to cnidarians. This mode of locomotion has interested both biologists and engineers for over a century. A central issue to understanding the important features of jet-propelling animals is to determine how the animal interacts with the surrounding fluid. Much of our knowledge of aquatic jet propulsion has come from simple theoretical approximations of both propulsive and resistive forces. Although these models and basic kinematic measurements have contributed greatly, they alone cannot provide the detailed information needed for a comprehensive, mechanistic overview of how jet propulsion functions across multiple taxa, size scales and through development. However, more recently, novel experimental tools such as high-speed 2D and 3D particle image velocimetry have permitted detailed quantification of the fluid dynamics of aquatic jet propulsion. Here, we provide a comparative analysis of a variety of parameters such as efficiency, kinematics and jet parameters, and review how they can aid our understanding of the principles of aquatic jet propulsion. Research on disparate taxa allows comparison of the similarities and differences between them and contributes to a more robust understanding of aquatic jet propulsion.
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Affiliation(s)
- Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, Florida 33620, USA
| | - John O Dabiri
- Graduate Aerospace Laboratories and Department of Mechanical and Civil Engineering, California Institute of Technology, Pasadena, California 91125, USA
| | - Sean P Colin
- Department of Marine Biology and Environmental Science, Roger Williams University, Bristol, Rhode Island 02809, USA
| | - John H Costello
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA
| | - James P Townsend
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, Oregon 97403, USA
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3
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Xu NW, Townsend JP, Costello JH, Colin SP, Gemmell BJ, Dabiri JO. Developing Biohybrid Robotic Jellyfish ( Aurelia aurita) for Free-swimming Tests in the Laboratory and in the Field. Bio Protoc 2021; 11:e3974. [PMID: 33889668 PMCID: PMC8054175 DOI: 10.21769/bioprotoc.3974] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2020] [Revised: 01/28/2021] [Accepted: 01/31/2021] [Indexed: 11/02/2022] Open
Abstract
Biohybrid robotics is a growing field that incorporates both live tissues and engineered materials to build robots that address current limitations in robots, including high power consumption and low damage tolerance. One approach is to use microelectronics to enhance whole organisms, which has previously been achieved to control the locomotion of insects. However, the robotic control of jellyfish swimming offers additional advantages, with the potential to become a new ocean monitoring tool in conjunction with existing technologies. Here, we delineate protocols to build a self-contained swim controller using commercially available microelectronics, embed the device into live jellyfish, and calculate vertical swimming speeds in both laboratory conditions and coastal waters. Using these methods, we previously demonstrated enhanced swimming speeds up to threefold, compared to natural jellyfish swimming, in laboratory and in situ experiments. These results offered insights into both designing low-power robots and probing the structure-function of basal organisms. Future iterations of these biohybrid robotic jellyfish could be used for practical applications in ocean monitoring.
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Affiliation(s)
- Nicole W. Xu
- Department of Bioengineering, Stanford University, Stanford, CA, USA
- Graduate Aerospace Laboratories (GALCIT), California Institute of Technology, Pasadena, CA, USA
| | - James P. Townsend
- Marine Biological Laboratory, Woods Hole, MA, USA
- Department of Biology, Providence College, Providence, RI, USA
| | - John H. Costello
- Marine Biological Laboratory, Woods Hole, MA, USA
- Department of Biology, Providence College, Providence, RI, USA
| | - Sean P. Colin
- Marine Biological Laboratory, Woods Hole, MA, USA
- Department of Marine Biology and Environmental Science, Roger Williams University, Bristol, RI, USA
| | - Brad J. Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL, USA
| | - John O. Dabiri
- Graduate Aerospace Laboratories (GALCIT), California Institute of Technology, Pasadena, CA, USA
- Department of Mechanical Engineering, California Institute of Technology, Pasadena, CA, USA
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4
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Gemmell BJ, Du Clos KT, Colin SP, Sutherland KR, Costello JH. The most efficient metazoan swimmer creates a 'virtual wall' to enhance performance. Proc Biol Sci 2021; 288:20202494. [PMID: 33402068 DOI: 10.1098/rspb.2020.2494] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
It has been well documented that animals (and machines) swimming or flying near a solid boundary get a boost in performance. This ground effect is often modelled as an interaction between a mirrored pair of vortices represented by a true vortex and an opposite sign 'virtual vortex' on the other side of the wall. However, most animals do not swim near solid surfaces and thus near body vortex-vortex interactions in open-water swimmers have been poorly investigated. In this study, we examine the most energetically efficient metazoan swimmer known to date, the jellyfish Aurelia aurita, to elucidate the role that vortex interactions can play in animals that swim away from solid boundaries. We used high-speed video tracking, laser-based digital particle image velocimetry (dPIV) and an algorithm for extracting pressure fields from flow velocity vectors to quantify swimming performance and the effect of near body vortex-vortex interactions. Here, we show that a vortex ring (stopping vortex), created underneath the animal during the previous swim cycle, is critical for increasing propulsive performance. This well-positioned stopping vortex acts in the same way as a virtual vortex during wall-effect performance enhancement, by helping converge fluid at the underside of the propulsive surface and generating significantly higher pressures which result in greater thrust. These findings advocate that jellyfish can generate a wall-effect boost in open water by creating what amounts to a 'virtual wall' between two real, opposite sign vortex rings. This explains the significant propulsive advantage jellyfish possess over other metazoans and represents important implications for bio-engineered propulsion systems.
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Affiliation(s)
- Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Kevin T Du Clos
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA.,Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, OR, USA
| | - John H Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA.,Biology Department, Providence College, Providence, RI 02908, USA
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Abstract
Temperature influences many physiological processes that govern life as a result of the thermal sensitivity of chemical reactions. The repeated evolution of endothermy and widespread behavioral thermoregulation in animals highlight the importance of elevating tissue temperature to increase the rate of chemical processes. Yet, movement performance that is robust to changes in body temperature has been observed in numerous species. This thermally robust performance appears exceptional in light of the well-documented effects of temperature on muscle contractile properties, including shortening velocity, force, power and work. Here, we propose that the thermal robustness of movements in which mechanical processes replace or augment chemical processes is a general feature of any organismal system, spanning kingdoms. The use of recoiling elastic structures to power movement in place of direct muscle shortening is one of the most thoroughly studied mechanical processes; using these studies as a basis, we outline an analytical framework for detecting thermal robustness, relying on the comparison of temperature coefficients (Q 10 values) between chemical and mechanical processes. We then highlight other biomechanical systems in which thermally robust performance that arises from mechanical processes may be identified using this framework. Studying diverse movements in the context of temperature will both reveal mechanisms underlying performance and allow the prediction of changes in performance in response to a changing thermal environment, thus deepening our understanding of the thermal ecology of many organisms.
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Affiliation(s)
- Jeffrey P Olberding
- Department of Ecology and Evolutionary Biology, University of California, Irvine, 321 Steinhaus Hall, Irvine, CA 92697, USA
| | - Stephen M Deban
- Department of Integrative Biology, University of South Florida, 4202 East Fowler Avenue, Science Center 110, Tampa, FL 33620, USA
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Costello JH, Colin SP, Dabiri JO, Gemmell BJ, Lucas KN, Sutherland KR. The Hydrodynamics of Jellyfish Swimming. ANNUAL REVIEW OF MARINE SCIENCE 2021; 13:375-396. [PMID: 32600216 DOI: 10.1146/annurev-marine-031120-091442] [Citation(s) in RCA: 24] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Jellyfish have provided insight into important components of animal propulsion, such as suction thrust, passive energy recapture, vortex wall effects, and the rotational mechanics of turning. These traits are critically important to jellyfish because they must propel themselves despite severe limitations on force production imposed by rudimentary cnidarian muscular structures. Consequently, jellyfish swimming can occur only by careful orchestration of fluid interactions. Yet these mechanics may be more broadly instructive because they also characterize processes shared with other animal swimmers, whose structural and neurological complexity can obscure these interactions. In comparison with other animal models, the structural simplicity, comparative energetic efficiency, and ease of use in laboratory experimentation allow jellyfish to serve as favorable test subjects for exploration of the hydrodynamic bases of animal propulsion. These same attributes also make jellyfish valuable models for insight into biomimetic or bioinspired engineeringof swimming vehicles. Here, we review advances in understanding of propulsive mechanics derived from jellyfish models as a pathway toward the application of animal mechanics to vehicle designs.
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Affiliation(s)
- John H Costello
- Department of Biology, Providence College, Providence, Rhode Island 02918, USA;
| | - Sean P Colin
- Department of Marine Biology and Environmental Science, Roger Williams University, Bristol, Rhode Island 02809, USA;
| | - John O Dabiri
- Graduate Aerospace Laboratories and Department of Mechanical and Civil Engineering, California Institute of Technology, Pasadena, California 91125, USA;
| | - Brad J Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, Florida 33620, USA;
| | - Kelsey N Lucas
- School for Environment and Sustainability, University of Michigan, Ann Arbor, Michigan 48109, USA;
| | - Kelly R Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, Oregon 97403, USA;
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Karakas F, Maas AE, Murphy DW. A novel cylindrical overlap-and-fling mechanism used by sea butterflies. J Exp Biol 2020; 223:jeb221499. [PMID: 32587067 DOI: 10.1242/jeb.221499] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2020] [Accepted: 06/19/2020] [Indexed: 11/20/2022]
Abstract
The clap-and-fling mechanism is a well-studied, unsteady lift generation mechanism widely used by flying insects and is considered obligatory for tiny insects flying at low to intermediate Reynolds numbers, Re However, some aquatic zooplankters including some pteropod (i.e. sea butterfly) and heteropod species swimming at low to intermediate Re also use the clap-and-fling mechanism. These marine snails have extremely flexible, actively deformed, muscular wings which they flap reciprocally to create propulsive force, and these wings may enable novel lift generation mechanisms not available to insects, which have less flexible, passively deformed wings. Using high-speed stereophotogrammetry and micro-particle image velocimetry, we describe a novel cylindrical overlap-and-fling mechanism used by the pteropod species Cuvierina atlantica In this maneuver, the pteropod's wingtips overlap at the end of each half-stroke to sequentially form a downward-opening cone, a cylinder and an upward-opening cone. The transition from downward-opening cone to cylinder produces a downward-directed jet at the trailing edges. Similarly, the transition from cylinder to upward-opening cone produces downward flow into the gap between the wings, a leading edge vortex ring and a corresponding sharp increase in swimming speed. The ability of this pteropod species to perform the cylindrical overlap-and-fling maneuver twice during each stroke is enabled by its slender body and highly flexible wings. The cylindrical overlap-and-fling mechanism observed here may inspire the design of new soft robotic aquatic vehicles incorporating highly flexible propulsors to take advantage of this novel lift generation technique.
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Affiliation(s)
- Ferhat Karakas
- Department of Mechanical Engineering, University of South Florida, Tampa, FL 33620, USA
| | - Amy E Maas
- Bermuda Institute of Ocean Sciences, St George's GE01, Bermuda
| | - David W Murphy
- Department of Mechanical Engineering, University of South Florida, Tampa, FL 33620, USA
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8
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Transient pressure modeling in jetting animals. J Theor Biol 2020; 494:110237. [DOI: 10.1016/j.jtbi.2020.110237] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2019] [Revised: 02/18/2020] [Accepted: 03/03/2020] [Indexed: 11/23/2022]
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Alben S, Puritz C. Intermittent sliding locomotion of a two-link body. Phys Rev E 2020; 101:052613. [PMID: 32575270 DOI: 10.1103/physreve.101.052613] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2020] [Accepted: 05/07/2020] [Indexed: 11/07/2022]
Abstract
We study the possibility of efficient intermittent locomotion for two-link bodies that slide by changing their interlink angle periodically in time. We find that the anisotropy ratio of the sliding friction coefficients is a key parameter, while solutions have a simple scaling dependence on the friction coefficients' magnitudes. With very anisotropic friction, efficient motions involve coasting in low-drag states, with rapid and asymmetric power and recovery strokes. As the anisotropy decreases, burst-and-coast motions change to motions with long power strokes and short recovery strokes, and roughly constant interlink angle velocity on each. These motions are seen in the spaces of sinusoidal and power-law motions described by two and five parameters, respectively. Allowing the duty cycle to vary greatly increases the motions' efficiency compared to the case of symmetric power and recovery strokes. Allowing further variations in the concavity of the power and recovery strokes improves the efficiency further only when friction is very anisotropic. Near isotropic friction, a variety of optimally efficient motions are found with more complex waveforms. Many of the optimal sinusoidal and power-law motions are similar to those that we find with an optimization search in the space of more general periodic functions (truncated Fourier series). When we increase the resistive force's power-law dependence on velocity, the optimal motions become smoother, slower, and less efficient, particularly near isotropic friction.
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Affiliation(s)
- Silas Alben
- Department of Mathematics, University of Michigan, Ann Arbor, Michigan 48109, USA
| | - Connor Puritz
- Department of Mathematics, University of Michigan, Ann Arbor, Michigan 48109, USA
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10
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Fannjiang C, Mooney TA, Cones S, Mann D, Shorter KA, Katija K. Augmenting biologging with supervised machine learning to study in situ behavior of the medusa Chrysaora fuscescens. ACTA ACUST UNITED AC 2019; 222:jeb.207654. [PMID: 31371399 PMCID: PMC6739807 DOI: 10.1242/jeb.207654] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2019] [Accepted: 07/29/2019] [Indexed: 11/20/2022]
Abstract
Zooplankton play critical roles in marine ecosystems, yet their fine-scale behavior remains poorly understood because of the difficulty in studying individuals in situ. Here, we combine biologging with supervised machine learning (ML) to propose a pipeline for studying in situ behavior of larger zooplankton such as jellyfish. We deployed the ITAG, a biologging package with high-resolution motion sensors designed for soft-bodied invertebrates, on eight Chrysaora fuscescens in Monterey Bay, using the tether method for retrieval. By analyzing simultaneous video footage of the tagged jellyfish, we developed ML methods to: (1) identify periods of tag data corrupted by the tether method, which may have compromised prior research findings, and (2) classify jellyfish behaviors. Our tools yield characterizations of fine-scale jellyfish activity and orientation over long durations, and we conclude that it is essential to develop behavioral classifiers on in situ rather than laboratory data. Summary: High-resolution motion sensors paired with supervised machine learning can be used to infer fine-scale in situ behavior of zooplankton over long durations.
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Affiliation(s)
- Clara Fannjiang
- Research and Development, Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA .,Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley, CA 94720, USA
| | - T Aran Mooney
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA
| | - Seth Cones
- Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA 02543, USA
| | | | - K Alex Shorter
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109, USA
| | - Kakani Katija
- Research and Development, Monterey Bay Aquarium Research Institute, Moss Landing, CA 95039, USA
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Gemmell BJ, Colin SP, Costello JH, Sutherland KR. A ctenophore (comb jelly) employs vortex rebound dynamics and outperforms other gelatinous swimmers. ROYAL SOCIETY OPEN SCIENCE 2019; 6:181615. [PMID: 31032019 PMCID: PMC6458386 DOI: 10.1098/rsos.181615] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2018] [Accepted: 01/31/2019] [Indexed: 06/08/2023]
Abstract
Gelatinous zooplankton exhibit a wide range of propulsive swimming modes. One of the most energetically efficient is the rowing behaviour exhibited by many species of schyphomedusae, which employ vortex interactions to achieve this result. Ctenophores (comb jellies) typically use a slow swimming, cilia-based mode of propulsion. However, species within the genus Ocyropsis have developed an additional propulsive strategy of rowing the lobes, which are normally used for feeding, in order to rapidly escape from predators. In this study, we used high-speed digital particle image velocimetry to examine the kinematics and fluid dynamics of this rarely studied propulsive mechanism. This mechanism allows Ocyropsis to achieve size-adjusted speeds that are nearly double those of other large gelatinous swimmers. The investigation of the fluid dynamic basis of this escape mode reveals novel vortex interactions that have not previously been described for other biological propulsion systems. The arrangement of vortices during escape swimming produces a similar configuration and impact as that of the well-studied 'vortex rebound' phenomenon which occurs when a vortex ring approaches a solid wall. These results extend our understanding of how animals use vortex-vortex interactions and provide important insights that can inform the bioinspired engineering of propulsion systems.
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Affiliation(s)
- Brad J. Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P. Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - John H. Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Biology Department, Providence College, Providence, RI 02908, USA
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Sutherland KR, Gemmell BJ, Colin SP, Costello JH. Propulsive design principles in a multi-jet siphonophore. J Exp Biol 2019; 222:jeb.198242. [DOI: 10.1242/jeb.198242] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2018] [Accepted: 02/20/2019] [Indexed: 11/20/2022]
Abstract
Coordination of multiple propulsors can provide performance benefits in swimming organisms. Siphonophores are marine colonial organisms that orchestrate the motion of multiple swimming zooids for effective swimming. However, the kinematics at the level of individual swimming zooids (nectophores) have not been examined in detail. We used high speed, high resolution microvideography and particle image velocimetry (PIV) of the physonect siphonophore, Nanomia bijuga, to study the motion of the nectophores and the associated fluid motion during jetting and refilling. The integration of nectophore and velum kinematics allow for a high-speed (maximum ∼1 m s−1), narrow (1-2 mm) jet and rapid refill as well as a 1:1 ratio of jetting to refill time. Scaled to the 3 mm nectophore length, jet speeds reach >300 lengths s−1. Overall swimming performance is enhanced by velocity gradients produced in the nectophore during refill, which lead to a high pressure region that produces forward thrust. Generating thrust during both the jet and refill phases augments the distance travelled by 17% over theoretical animals, which generate thrust only during the jet phase. The details of velum kinematics and associated fluid mechanics elucidate how siphonophores effectively navigate three-dimensional space and could be applied to exit flow parameters in multijet underwater vehicles.
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Affiliation(s)
- Kelly R. Sutherland
- Oregon Institute of Marine Biology, University of Oregon, Eugene, OR 97402, USA
| | - Brad J. Gemmell
- Department of Integrative Biology, University of South Florida, Tampa, FL 33620, USA
| | - Sean P. Colin
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Marine Biology/Environmental Sciences, Roger Williams University, Bristol, RI 02809, USA
| | - John H. Costello
- Whitman Center, Marine Biological Laboratory, Woods Hole, MA 02543, USA
- Biology Department, Providence College, Providence, RI 02908, USA
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