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Demchenko AV, De Meo C. The 4K reaction. Carbohydr Res 2024; 538:109102. [PMID: 38569333 DOI: 10.1016/j.carres.2024.109102] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/21/2024] [Revised: 03/22/2024] [Accepted: 03/26/2024] [Indexed: 04/05/2024]
Abstract
The classical Koenigs-Knorr glycosidation of bromides or chlorides promoted with Ag2O or Ag2CO3 works only with reactive substrates (ideally both donor and acceptor). This reaction was found to be practically ineffective with unreactive donors such as per-O-benzoylated mannosyl bromide. Recently, it was discovered that the addition of catalytic (Lewis) acids to a silver salt-promoted reaction has a dramatic effect on the reaction rate and yield. A tentative mechanism for this cooperatively-catalyzed glycosylation reaction has been proposed, and the improved understanding of the reaction led to more efficient protocols and broader applications to a variety of glycosidic linkages. Since Ag2O-mediated activation was introduced by German chemists Koenigs and Knorr, and "cooperatively catalyzed" is Kooperativ Katalysiert in German, we refer to this new reaction as "the 4K reaction."
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Affiliation(s)
- Alexei V Demchenko
- Department of Chemistry, Saint Louis University, 3501 Laclede Ave, St. Louis, Missouri, 63103, United States.
| | - Cristina De Meo
- Department of Chemistry, Southern Illinois University Edwardsville, 1 Hairpin Dr., Edwardsville, IL, 62025, United States
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2
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Singh Y, Geringer SA, Demchenko AV. Synthesis and Glycosidation of Anomeric Halides: Evolution from Early Studies to Modern Methods of the 21st Century. Chem Rev 2022; 122:11701-11758. [PMID: 35675037 PMCID: PMC9417321 DOI: 10.1021/acs.chemrev.2c00029] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Advances in synthetic carbohydrate chemistry have dramatically improved access to common glycans. However, many novel methods still fail to adequately address challenges associated with chemical glycosylation and glycan synthesis. Since a challenge of glycosylation has remained, scientists have been frequently returning to the traditional glycosyl donors. This review is dedicated to glycosyl halides that have played crucial roles in shaping the field of glycosciences and continue to pave the way toward our understanding of chemical glycosylation.
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Affiliation(s)
- Yashapal Singh
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Scott A Geringer
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
| | - Alexei V Demchenko
- Department of Chemistry and Biochemistry, University of Missouri-St. Louis, One University Boulevard, St. Louis, Missouri 63121, United States
- Department of Chemistry, Saint Louis University, 3501 Laclede Avenue, St. Louis, Missouri 63103, United States
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Abstract
The development of glycobiology relies on the sources of particular oligosaccharides in their purest forms. As the isolation of the oligosaccharide structures from natural sources is not a reliable option for providing samples with homogeneity, chemical means become pertinent. The growing demand for diverse oligosaccharide structures has prompted the advancement of chemical strategies to stitch sugar molecules with precise stereo- and regioselectivity through the formation of glycosidic bonds. This Review will focus on the key developments towards chemical O-glycosylations in the current century. Synthesis of novel glycosyl donors and acceptors and their unique activation for successful glycosylation are discussed. This Review concludes with a summary of recent developments and comments on future prospects.
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Affiliation(s)
- Rituparna Das
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
| | - Balaram Mukhopadhyay
- Department of Chemical SciencesIndian Institute of Science Education and Research (IISER) KolkataMohanpurNadia741246India
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Kaeothip S, Demchenko AV. Expeditious oligosaccharide synthesis via selective, semi-orthogonal, and orthogonal activation. Carbohydr Res 2011; 346:1371-88. [PMID: 21663897 PMCID: PMC3129461 DOI: 10.1016/j.carres.2011.05.004] [Citation(s) in RCA: 57] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2011] [Revised: 05/04/2011] [Accepted: 05/05/2011] [Indexed: 12/11/2022]
Abstract
Traditional strategies for oligosaccharide synthesis often require extensive protecting and/or leaving group manipulations between each glycosylation step, thereby increasing the total number of synthetic steps while decreasing the efficiency of the synthesis. In contrast, expeditious strategies allow for the rapid chemical synthesis of complex carbohydrates by minimizing extraneous chemical manipulations. Oligosaccharide synthesis by selective activation of one leaving group over another is one such expeditious strategy. Herein, the significant improvements that have recently emerged in the area of the selective activation are discussed. The development of orthogonal strategy further expands the scope of the selective activation methodology. Surveyed in this article, are representative examples wherein these excellent innovations have been applied to the synthesis of various oligosaccharide sequences.
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Affiliation(s)
- Sophon Kaeothip
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis, One University Boulevard, St. Louis, MO 63121, USA
| | - Alexei V. Demchenko
- Department of Chemistry and Biochemistry, University of Missouri – St. Louis, One University Boulevard, St. Louis, MO 63121, USA
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5
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Smoot JT, Demchenko AV. Oligosaccharide synthesis: from conventional methods to modern expeditious strategies. Adv Carbohydr Chem Biochem 2009; 62:161-250. [PMID: 19501706 DOI: 10.1016/s0065-2318(09)00005-5] [Citation(s) in RCA: 48] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- James T Smoot
- Department of Chemistry and Biochemistry, University of Missouri, St. Louis, MO 63121, USA
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Abstract
This Review describes the basic concepts that have guided our exploration of new chemical reactions by giving examples of results from my research group. Our strategy of carrying out research is to investigate three to four different topics at a time so we can gather as many results as possible. These may at first appear unrelated to each other but may have the potential to be united into a greater hypothesis after repeated feedback. Three scenarios from our research are presented: the "oxidative-reductive condensation reaction" devised in 1960, which after an interval of nearly 40 years brought forth the new concept of using compounds of structure Ph(2)POR as reducing reagents; the "TiCl(4)-aldol reaction" of 1973 that eventually led to the present "base-promoted aldol reaction" through a chain of ideas; and the "glycosylation reaction using fluorosugars" from 1984 which recently bloomed into "stereocontrolled glycosylation". Thus, it can be said that by reviewing what we had done before, we were able to expand on it to achieve new outcomes.
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Affiliation(s)
- Teruaki Mukaiyama
- Center for Basic Research, The Kitasato Institute, 6-15-5, Toshima, Kita-ku, Tokyo 114-0003, Japan.
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Castro-Palomino JC, Simon B, Speer O, Leist M, Schmidt RR. Synthesis of ganglioside GD3 and its comparison with bovine GD3 with regard to oligodendrocyte apoptosis mitochondrial damage. Chemistry 2001; 7:2178-84. [PMID: 11411990 DOI: 10.1002/1521-3765(20010518)7:10<2178::aid-chem2178>3.0.co;2-e] [Citation(s) in RCA: 33] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
Abstract
2,3-Dehydroneuraminic acid derivative 5 was transformed in five efficient steps into sialyl donor 2, which has a phenylthio group on the beta-side of the 3-position for anchimeric assistance and a diethyl phosphite residue as leaving group at the anomeric carbon. The known GM3 intermediate 10 was transformed into the 4b,4c,8c-O-unprotected acceptor 3, which was then allowed to react with 2 by using TMSOTf as catalyst and acetonitrile as solvent to afford the desired tetrasaccharide 12, which has an alpha(2-8)-linkage between two neuraminic acid residues. Removal of the phenylthio group gave intermediate 13, which was transformed into O-tetraosyl trichloroacetimidate 16 as glycosyl donor. Application of the azidosphingosine glycosylation procedure furnished GD3 (1) in high overall yield. Comparison of synthetic GD3 with bovine-brain-derived GD3 showed that there were similar effects in GD3-triggered uncoupling of mitochondrial respiration and in induction of apoptosis in oligodendrocytes.
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Deshpande PP, Kim HM, Zatorski A, Park TK, Ragupathi G, Livingston PO, Live D, Danishefsky SJ. Strategy in Oligosaccharide Synthesis: An Application to a Concise Total Synthesis of the KH-1(adenocarcinoma) Antigen. J Am Chem Soc 1998. [DOI: 10.1021/ja9725864] [Citation(s) in RCA: 46] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
Affiliation(s)
- Prashant P. Deshpande
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Hyunjin M. Kim
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Andrzej Zatorski
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Tae-Kyo Park
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Govindaswami Ragupathi
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Philip O. Livingston
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - David Live
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
| | - Samuel J. Danishefsky
- Contribution from the Laboratories for Bioorganic Chemistry, Tumor Vaccinology, and Nucleic Acid and Protein Structure, Sloan-Kettering Institute For Cancer Research, 1275 York Avenue, New York, New York 10021, and The Department of Chemistry, Columbia University, New York, New York 10027
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