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Vorderwülbecke BJ, Baroumand AG, Spinelli L, Seeck M, van Mierlo P, Vulliémoz S. Automated interictal source localisation based on high-density EEG. Seizure 2021; 92:244-251. [PMID: 34626920 DOI: 10.1016/j.seizure.2021.09.020] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/21/2021] [Revised: 09/25/2021] [Accepted: 09/29/2021] [Indexed: 11/26/2022] Open
Abstract
PURPOSE To study the accuracy of automated interictal EEG source localisation based on high-density EEG, and to compare it to low-density EEG. METHODS Thirty patients operated for pharmacoresistant focal epilepsy were retrospectively examined. Twelve months after resective brain surgery, 18 were seizure-free or had 'auras' only, while 12 had persistence of disabling seizures. Presurgical 257-channel EEG lasting 3-20 h was down-sampled to 25, 40, and 204 channels for separate analyses. For each electrode setup, interictal spikes were detected, clustered, and averaged automatically before validation by an expert reviewer. An individual 6-layer finite difference head model and the standardised low-resolution electromagnetic tomography were used to localise the maximum source activity of the most prevalent spike. Sublobar concordance with the resected brain area was visually assessed and related to favourable vs. unfavourable postsurgical outcome. RESULTS Depending on the EEG setup, epileptic spikes were detected in 21-24 patients (70-80%). The median number of single spikes per average was 470 (range 17-15,066). Diagnostic sensitivity of EEG source localisation was 58-75%, specificity was 50-67%, and overall accuracy was 55-71%. There were no significant differences between low- and high-density EEG setups with 25 to 257 electrodes. CONCLUSION Automated high-density EEG source localisation provides meaningful information in the majority of cases. With hundreds of single spikes averaged, diagnostic accuracy is similar in high- and low-density EEG. Therefore, low-density EEG may be sufficient for interictal EEG source localisation if high numbers of spikes are available.
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Affiliation(s)
- Bernd J Vorderwülbecke
- EEG and Epilepsy Unit, University Hospitals and Faculty of Medicine, University of Geneva, Rue Gabrielle-Perret-Gentil 4, 1205 Geneva, Switzerland; Epilepsy-Center Berlin-Brandenburg, Department of Neurology, Charité - Universitätsmedizin Berlin, Charitéplatz 1, 10117 Berlin, Germany.
| | - Amir G Baroumand
- Medical Image and Signal Processing Group, Department of Electronics and Information Systems, Ghent University, Corneel Heymanslaan 10, 9000 Ghent, Belgium; Epilog NV, Vlasgaardstraat 52, 9000 Ghent, Belgium
| | - Laurent Spinelli
- EEG and Epilepsy Unit, University Hospitals and Faculty of Medicine, University of Geneva, Rue Gabrielle-Perret-Gentil 4, 1205 Geneva, Switzerland
| | - Margitta Seeck
- EEG and Epilepsy Unit, University Hospitals and Faculty of Medicine, University of Geneva, Rue Gabrielle-Perret-Gentil 4, 1205 Geneva, Switzerland
| | - Pieter van Mierlo
- Medical Image and Signal Processing Group, Department of Electronics and Information Systems, Ghent University, Corneel Heymanslaan 10, 9000 Ghent, Belgium; Epilog NV, Vlasgaardstraat 52, 9000 Ghent, Belgium
| | - Serge Vulliémoz
- EEG and Epilepsy Unit, University Hospitals and Faculty of Medicine, University of Geneva, Rue Gabrielle-Perret-Gentil 4, 1205 Geneva, Switzerland
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Wei B, Zhao X, Shi L, Xu L, Liu T, Zhang J. A deep learning framework with multi-perspective fusion for interictal epileptiform discharges detection in scalp electroencephalogram. J Neural Eng 2021; 18. [PMID: 34157696 DOI: 10.1088/1741-2552/ac0d60] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2021] [Accepted: 06/22/2021] [Indexed: 11/11/2022]
Abstract
Objective.Interictal epileptiform discharges (IEDs) are an important and widely accepted biomarker used in the diagnosis of epilepsy based on scalp electroencephalography (EEG). Because the visual detection of IEDs has various limitations, including high time consumption and high subjectivity, a faster, more robust, and automated IED detector is strongly in demand.Approach.Based on deep learning, we proposed an end-to-end framework with multi-scale morphologic features in the time domain and correlation in sensor space to recognize IEDs from raw scalp EEG.Main Results.Based on a balanced dataset of 30 patients with epilepsy, the results of the five-fold (leave-6-patients-out) cross-validation shows that our model achieved state-of-the-art detection performance (accuracy: 0.951, precision: 0.973, sensitivity: 0.938, specificity: 0.968, F1 score: 0.954, AUC: 0.973). Furthermore, our model maintained excellent IED detection rates in an independent test on three datasets.Significance.The proposed model could be used to assist neurologists in clinical EEG interpretation of patients with epilepsy. Additionally, this approach combines multi-level output and correlation among EEG sensors and provides new ideas for epileptic biomarker detection in scalp EEG.
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Affiliation(s)
- Boxuan Wei
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Heifei Innovation Research Institute, Beihang University, Hefei 230012, People's Republic of China.,Beijing Advanced Innovation Centre for Biomedical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Big Data-Based Precision Medicine, Beihang University, Beijing 100191, People's Republic of China
| | - Xiaohui Zhao
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Biomedical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Big Data-Based Precision Medicine, Beihang University, Beijing 100191, People's Republic of China
| | - Lijuan Shi
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Big Data-Based Precision Medicine, Beihang University, Beijing 100191, People's Republic of China
| | - Lu Xu
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Biomedical Engineering, Beihang University, Beijing 100191, People's Republic of China
| | - Tao Liu
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China
| | - Jicong Zhang
- School of Biological Science and Medical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Heifei Innovation Research Institute, Beihang University, Hefei 230012, People's Republic of China.,Beijing Advanced Innovation Centre for Biomedical Engineering, Beihang University, Beijing 100191, People's Republic of China.,Beijing Advanced Innovation Centre for Big Data-Based Precision Medicine, Beihang University, Beijing 100191, People's Republic of China
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Fürbass F, Koren J, Hartmann M, Brandmayr G, Hafner S, Baumgartner C. Activation patterns of interictal epileptiform discharges in relation to sleep and seizures: An artificial intelligence driven data analysis. Clin Neurophysiol 2021; 132:1584-1592. [PMID: 34030056 DOI: 10.1016/j.clinph.2021.03.052] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 03/11/2021] [Accepted: 03/26/2021] [Indexed: 10/21/2022]
Abstract
OBJECTIVE To quantify effects of sleep and seizures on the rate of interictal epileptiform discharges (IED) and to classify patients with epilepsy based on IED activation patterns. METHODS We analyzed long-term EEGs from 76 patients with at least one recorded epileptic seizure during monitoring. IEDs were detected with an AI-based algorithm and validated by visual inspection. We then used unsupervised clustering to characterize patient sub-cohorts with similar IED activation patterns regarding circadian rhythms, deep sleep activation, and seizure occurrence. RESULTS Five sub-cohorts with similar IED activation patterns were found: "Sporadic" (14%, n = 10) without or few IEDs, "Continuous" (32%, n = 23) with weak circadian/deep sleep or seizure modulation, "Nighttime & seizure activation" (23%, n = 17) with high IED rates during normal sleep times and after seizures but without deep sleep modulation, "Deep sleep" (19%, n = 14) with strong IED modulation during deep sleep, and "Seizure deactivation" (12%, n = 9) with deactivation of IEDs after seizures. Patients showing "Deep sleep" IED pattern were diagnosed with temporal lobe epilepsy in 86%, while 80% of the "Sporadic" cluster were extratemporal. CONCLUSIONS Patients with epilepsy can be characterized by using temporal relationships between rates of IEDs, circadian rhythms, deep sleep and seizures. SIGNIFICANCE This work presents the first approach to data-driven classification of epilepsy patients based on their fully validated temporal pattern of IEDs.
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Affiliation(s)
- Franz Fürbass
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria.
| | - Johannes Koren
- Department of Neurology, Clinic Hietzing, Vienna, Austria; Karl Landsteiner Institute for Clinical Epilepsy Research and Cognitive Neurology, Vienna, Austria
| | - Manfred Hartmann
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Georg Brandmayr
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria; Institute of Artificial Intelligence & Decision Support, Medical University Vienna, Vienna, Austria
| | | | - Christoph Baumgartner
- Department of Neurology, Clinic Hietzing, Vienna, Austria; Karl Landsteiner Institute for Clinical Epilepsy Research and Cognitive Neurology, Vienna, Austria; Medical Faculty, Sigmund Freud University, Vienna, Austria
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Thomas J, Jin J, Thangavel P, Bagheri E, Yuvaraj R, Dauwels J, Rathakrishnan R, Halford JJ, Cash SS, Westover B. Automated Detection of Interictal Epileptiform Discharges from Scalp Electroencephalograms by Convolutional Neural Networks. Int J Neural Syst 2020; 30:2050030. [PMID: 32812468 DOI: 10.1142/s0129065720500306] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Abstract
Visual evaluation of electroencephalogram (EEG) for Interictal Epileptiform Discharges (IEDs) as distinctive biomarkers of epilepsy has various limitations, including time-consuming reviews, steep learning curves, interobserver variability, and the need for specialized experts. The development of an automated IED detector is necessary to provide a faster and reliable diagnosis of epilepsy. In this paper, we propose an automated IED detector based on Convolutional Neural Networks (CNNs). We have evaluated the proposed IED detector on a sizable database of 554 scalp EEG recordings (84 epileptic patients and 461 nonepileptic subjects) recorded at Massachusetts General Hospital (MGH), Boston. The proposed CNN IED detector has achieved superior performance in comparison with conventional methods with a mean cross-validation area under the precision-recall curve (AUPRC) of 0.838[Formula: see text]±[Formula: see text]0.040 and false detection rate of 0.2[Formula: see text]±[Formula: see text]0.11 per minute for a sensitivity of 80%. We demonstrated the proposed system to be noninferior to 30 neurologists on a dataset from the Medical University of South Carolina (MUSC). Further, we clinically validated the system at National University Hospital (NUH), Singapore, with an agreement accuracy of 81.41% with a clinical expert. Moreover, the proposed system can be applied to EEG recordings with any arbitrary number of channels.
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Affiliation(s)
- John Thomas
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Jing Jin
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Prasanth Thangavel
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Elham Bagheri
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Rajamanickam Yuvaraj
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Justin Dauwels
- School of Electrical and Electronic Engineering, Nanyang Technological University, Singapore 639798, Singapore
| | - Rahul Rathakrishnan
- Division of Neurology, National University Hospital, Singapore 119074, Singapore
| | - Jonathan J Halford
- Department of Neurology, Medical University of South Carolina, Charleston, SC 29425, USA
| | - Sydney S Cash
- Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.,Harvard Medical School, Boston, MA 02115, USA
| | - Brandon Westover
- Department of Neurology, Massachusetts General Hospital, Boston, MA 02114, USA.,Harvard Medical School, Boston, MA 02115, USA
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Fürbass F, Kural MA, Gritsch G, Hartmann M, Kluge T, Beniczky S. An artificial intelligence-based EEG algorithm for detection of epileptiform EEG discharges: Validation against the diagnostic gold standard. Clin Neurophysiol 2020; 131:1174-1179. [PMID: 32299000 DOI: 10.1016/j.clinph.2020.02.032] [Citation(s) in RCA: 36] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2019] [Revised: 02/14/2020] [Accepted: 02/29/2020] [Indexed: 12/22/2022]
Abstract
OBJECTIVE To validate an artificial intelligence-based computer algorithm for detection of epileptiform EEG discharges (EDs) and subsequent identification of patients with epilepsy. METHODS We developed an algorithm for automatic detection of EDs, based on a novel deep learning method that requires a low amount of labeled EEG data for training. Detected EDs are automatically grouped into clusters, consisting of the same type of EDs, for rapid visual inspection. We validated the algorithm on an independent dataset of 100 patients with sharp transients in their EEG recordings (54 with epilepsy and 46 with non-epileptic paroxysmal events). The diagnostic gold standard was derived from the video-EEG recordings of the patients' habitual events. RESULTS The algorithm had a sensitivity of 89% for identifying EEGs with EDs recorded from patients with epilepsy, a specificity of 70%, and an overall accuracy of 80%. CONCLUSIONS Automated detection of EDs using an artificial intelligence-based computer algorithm had a high sensitivity. Human (expert) supervision is still necessary for confirming the clusters of detected EDs and for describing clinical correlations. Further studies on different patient populations will be needed to confirm our results. SIGNIFICANCE The automated algorithm we describe here is a useful tool, assisting neurophysiologist in rapid assessment of EEG recordings.
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Affiliation(s)
- Franz Fürbass
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Mustafa Aykut Kural
- Department of Clinical Neurophysiology, Aarhus University Hospital and Department of Clinical Medicine, Aarhus University, Aarhus, Denmark
| | - Gerhard Gritsch
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Manfred Hartmann
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Tilmann Kluge
- Center for Health & Bioresources, AIT Austrian Institute of Technology GmbH, Vienna, Austria
| | - Sándor Beniczky
- Department of Clinical Neurophysiology, Aarhus University Hospital and Department of Clinical Medicine, Aarhus University, Aarhus, Denmark; Department of Clinical Neurophysiology, Danish Epilepsy Centre, Dianalund, Denmark.
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