1
|
Kirkove M, Zhao Y, Leblanc O, Jacques L, Georges M. ADMM-inspired image reconstruction for terahertz off-axis digital holography. JOURNAL OF THE OPTICAL SOCIETY OF AMERICA. A, OPTICS, IMAGE SCIENCE, AND VISION 2024; 41:A1-A14. [PMID: 38437418 DOI: 10.1364/josaa.504126] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/25/2023] [Accepted: 11/20/2023] [Indexed: 03/06/2024]
Abstract
Image reconstruction in off-axis terahertz digital holography is complicated due to the harsh recording conditions and the non-convexity form of the problem. In this paper, we propose an inverse problem-based reconstruction technique that jointly reconstructs the object field and the amplitude of the reference field. Regularization in the wavelet domain promotes a sparse object solution. A single objective function combining the data-fidelity and regularization terms is optimized with a dedicated algorithm based on an alternating direction method of multipliers framework. Each iteration alternates between two consecutive optimizations using projections operating on each solution and one soft thresholding operator applying to the object solution. The method is preceded by a windowing process to alleviate artifacts due to the mismatch between camera frame truncation and periodic boundary conditions assumed to implement convolution operators. Experiments demonstrate the effectiveness of the proposed method, in particular, improvements of reconstruction quality, compared to two other methods.
Collapse
|
2
|
Soulez F, Rostykus M, Moser C, Unser M. A constrained method for lensless coherent imaging of thin samples. APPLIED OPTICS 2022; 61:F34-F46. [PMID: 35333224 DOI: 10.1364/ao.445078] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Accepted: 12/15/2021] [Indexed: 06/14/2023]
Abstract
Lensless inline holography can produce high-resolution images over a large field of view (FoV). In a previous work [Appl. Opt.60, B38 (2021)APOPAI0003-693510.1364/AO.414976], we showed that (i) the actual FoV can be extrapolated outside of the camera FoV and (ii) the effective resolution of the setup can be several times higher than the resolution of the camera. In this paper, we present a reconstruction method to recover high resolution with an extrapolated FoV image of the phase and the amplitude of a sample from aliased intensity measurements taken at a lower resolution.
Collapse
|
3
|
Shimobaba T, Hoshi I, Shiomi H, Wang F, Hara T, Kakue T, Ito T. Mitigating ringing artifacts in diffraction calculations using average subtractions. APPLIED OPTICS 2021; 60:6393-6399. [PMID: 34612873 DOI: 10.1364/ao.431216] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2021] [Accepted: 06/23/2021] [Indexed: 06/13/2023]
Abstract
Fourier transform-based diffraction calculations are essential for computational optics. However, the diffraction calculations can be corrupted by the introduction of strong ringing artifacts due to the introduction of zero-padding to avoid circular convolution or to control the sampling intervals. We propose a simple de-ringing method using average subtractions for application to on-axis and off-axis diffraction calculations. To verify the effectiveness of the proposed method, we compared the diffracted fields obtained using zero-padding, a flat-top window method, a mirror expansion method, and the whole and border average subtractions proposed. Furthermore, we confirmed the effectiveness of the proposed method for hologram calculations using double phase encoding and image reconstructions of inline digital holography.
Collapse
|
4
|
Soulez F. Gauging diffraction patterns: field of view and bandwidth estimation in lensless holography. APPLIED OPTICS 2021; 60:B38-B48. [PMID: 33798135 DOI: 10.1364/ao.414976] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2020] [Accepted: 01/14/2021] [Indexed: 06/12/2023]
Abstract
The purpose of this work is to provide a theoretically grounded assessment on the field of view and bandwidth of a lensless holographic setup. Indeed, while previous works have presented results with super-resolution and field-of-view extrapolation, there are no well-established rules to determine them. We show that the theoretical field of view can be large with a spatial-frequency bandwidth only limited by the wavelength, leading to an unthinkable number of degrees of freedom. To keep a realistic field of view and bandwidth, we propose several practical bounds based on a few setup properties, namely, the noise level and spatiotemporal coherence of the source.
Collapse
|
5
|
Hesseling C, Homeyer T, Peinke J, Gülker G. Effects of particle locations on reconstructed particle images in digital holography. APPLIED OPTICS 2016; 55:9532-9545. [PMID: 27869850 DOI: 10.1364/ao.55.009532] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The intensity and phase reconstructed from digital in-line holograms by the convolution approach are analyzed. Distortions of particle images depending on their position in the plane transverse to the optical axis are identified. For this purpose, the object fields of numerically simulated particle holograms as well as of experimental data are reconstructed. The results of three-dimensional correlations of numerical and experimental data are superior when the numerically generated reference volumes are adapted to the transverse locations of the particle. Thus, proof is given that the characteristics of a particle image change distinctly with the transverse position of the particle and that the numerical model successfully simulates these changes. Hence, this knowledge can be integrated in future particle position detection algorithms.
Collapse
|
6
|
Minetti C, Vitkova V, Dubois F, Bivas I. Digital holographic microscopy as a tool to study the thermal shape fluctuations of lipid vesicles. OPTICS LETTERS 2016; 41:1833-1836. [PMID: 27082357 DOI: 10.1364/ol.41.001833] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
The bending elasticity modulus of lipid membranes is obtained by applying for the first time, to the best of our knowledge, a novel experimental technique based on digital holographic microscopy. The fluctuations of the radius with time were extracted by tracking and measuring the optical thickness at the vesicle poles. The temporal autocorrelation function of the vesicle diameter computed for each of the studied vesicles was then fitted with the theoretical expression to deduce the membrane's tension and bending constant. For the bending elasticity modulus of SOPC bilayers, the value of (0.93 ± 0.03) × 10(-12) erg was obtained. This result is in accordance with values previously obtained by means of other conventional methods for the same type of lipid membrane in the presence of sugar molecules in aqueous medium. The obtained results encourage the future development of the digital holographic microscopy as a technique suitable for the measurement of the bending elasticity of lipid membranes.
Collapse
|
7
|
Minetti C, Podgorski T, Coupier G, Dubois F. Fully automated digital holographic processing for monitoring the dynamics of a vesicle suspension under shear flow. BIOMEDICAL OPTICS EXPRESS 2014; 5:1554-68. [PMID: 24877015 PMCID: PMC4026899 DOI: 10.1364/boe.5.001554] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2014] [Revised: 04/10/2014] [Accepted: 04/11/2014] [Indexed: 05/16/2023]
Abstract
We investigate the dynamics of a vesicle suspension under shear flow between plates using DHM with a spatially reduced coherent source. Holograms are grabbed at a frequency of 24 frames/sec. The distribution of the vesicle suspension is obtained after numerical processing of the digital holograms sequence resulting in a 4D distribution. Obtaining this distribution is not straightforward and requires special processing to automate the analysis. We present an original method that fully automates the analysis and provides distributions that are further analyzed to extract physical properties of the fluid. Details of the numerical implementation, as well as sample experimental results are presented.
Collapse
Affiliation(s)
- Christophe Minetti
- Service de Chimie-Physique EP, Université libre de Bruxelles, 50 Avenue F. Roosevelt, CP16/62, B-1050 Brussels, Belgium
| | - Thomas Podgorski
- Laboratoire Interdisciplinaire de Physique, CNRS-UMR 5588, Université Grenoble I, B.P. 87, 38402 Saint Martin d’Hères Cedex, France
| | - Gwennou Coupier
- Laboratoire Interdisciplinaire de Physique, CNRS-UMR 5588, Université Grenoble I, B.P. 87, 38402 Saint Martin d’Hères Cedex, France
| | - Frank Dubois
- Service de Chimie-Physique EP, Université libre de Bruxelles, 50 Avenue F. Roosevelt, CP16/62, B-1050 Brussels, Belgium
| |
Collapse
|
8
|
Porras-Aguilar R, Kujawinska M, Zaperty W. Capture and display mismatch compensation for real-time digital holographic interferometry. APPLIED OPTICS 2014; 53:2870-2880. [PMID: 24921874 DOI: 10.1364/ao.53.002870] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2014] [Accepted: 03/27/2014] [Indexed: 06/03/2023]
Abstract
Optical holographic interferometry (HI) is realized by two well-known techniques: double exposure holographic interferometry (DEHI) and real-time holographic interferometry (RTHI). However, the digital version of HI is typically realized numerically by DEHI. The main problem in digital implementation of RTHI is the lack of commercially available cameras and spatial light modulators with the same pixel size. This mismatch results in lateral and transversal magnifications of an object wavefront reconstruction. In real-time digital HI the reconstruction of an object in an initial state has to be superimposed on top of the loaded object. In this work, we present and analyze five approaches to overcome the mismatch problem, and the performance of these procedures is numerically quantified and compared. The experimental suitability of these approaches is investigated.
Collapse
|
9
|
Yourassowsky C, Dubois F. High throughput holographic imaging-in-flow for the analysis of a wide plankton size range. OPTICS EXPRESS 2014; 22:6661-73. [PMID: 24664015 DOI: 10.1364/oe.22.006661] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/12/2023]
Abstract
We developed a Digital Holographic Microscope (DHM) working with a partial coherent source specifically adapted to perform high throughput recording of holograms of plankton organisms in-flow, in a size range of 3 µm-300 µm, which is of importance for this kind of applications. This wide size range is achieved with the same flow cell and with the same microscope magnification. The DHM configuration combines a high magnification with a large field of view and provides high-resolution intensity and quantitative phase images refocusing on high sample flow rate. Specific algorithms were developed to detect and extract automatically the particles and organisms present in the samples in order to build holograms of each one that are used for holographic refocusing and quantitative phase contrast imaging. Experimental results are shown and discussed.
Collapse
|
10
|
Týč M, Kvasnica L, Slabá M, Chmelík R. Numerical refocusing in digital holographic microscopy with extended-sources illumination. OPTICS EXPRESS 2013; 21:28258-28271. [PMID: 24514337 DOI: 10.1364/oe.21.028258] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Abstract
Numerical refocusing can be seen as a method of compensating the defocus aberration based on deconvolution by inverse filtering [1] in digital holographic microscopy (DHM). It is well-understood in cases when a coherent (ie point and monochromatic) light source such as a collimated laser beam is used [2]. This paper extends the theory to the case of illumination by a quasi-monochromatic extended (spatially incoherent) source. Refocusing methods for spatially incoherent illumination are derived and benefits of this type of illumination are demonstrated. We have proved both theoretically and experimentally that coherent-based refocusing gives incorrect results for extended-source illumination, while results obtained using the newly derived method are correct.
Collapse
|
11
|
El Mallahi A, Dubois F. Dependency and precision of the refocusing criterion based on amplitude analysis in digital holographic microscopy. OPTICS EXPRESS 2011; 19:6684-98. [PMID: 21451695 DOI: 10.1364/oe.19.006684] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We analyze the dependency and the accuracy of the refocusing criterion based on the integrated modulus amplitude in the case of amplitude object. Analytical dependencies on the defocus distance and the numerical aperture are found. This theoretical prediction for the refocusing criterion is well supported by simulation. We study also the robustness of the refocusing criterion by adding salt and pepper and speckle-type noises. We demonstrate that the refocusing criterion is robust up to an significant level of noise that can perturb the holograms.
Collapse
Affiliation(s)
- Ahmed El Mallahi
- Université Libre de Bruxelles, Microgravity Research Center, Brussel, Belgium.
| | | |
Collapse
|
12
|
Zhang Y, Zhao J, Fan Q, Zhang W, Yang S. Improving the reconstruction quality with extension and apodization of the digital hologram. APPLIED OPTICS 2009; 48:3070-3074. [PMID: 19488120 DOI: 10.1364/ao.48.003070] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
To suppress the aperture diffraction and spectral leakage effects in the reconstruction process of the digital hologram and to maintain the original information recorded in the hologram, a novel reconstruction method based on extension and apodization of the digital hologram is presented, by which the original hologram can be extended by filling the average intensity values of the boundary, and the extended hologram is apodized by use of the constructed window function. As a sample, the digital hologram of the static particle field is recorded and numerically extended and then apodized with the appointed window. Finally, an unabridged and clear digital holographic image is reconstructed from the extended and apodized hologram. The experimental results confirm that this method cannot only eliminate the black-and-white diffraction fringes in the reconstructed image, but also attain the unabridged image with high quality.
Collapse
Affiliation(s)
- Yancao Zhang
- Shaanxi Key Laboratory of Optical Information Technology, Institute of Optical Information and Technology, School of Science, Northwestern Polytechnical University, Xi'an 710072, China
| | | | | | | | | |
Collapse
|
13
|
Fu Y, Shi H, Miao H. Vibration measurement of a miniature component by high-speed image-plane digital holographic microscopy. APPLIED OPTICS 2009; 48:1990-1997. [PMID: 19363535 DOI: 10.1364/ao.48.001990] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
Measuring deformation of vibrating specimens whose dimensions are in the submillimeter range introduces a number of difficulties using laser interferometry. Normal interferometry is not suitable because of a phase ambiguity problem. In addition, the noise effect is much more serious in the measurement of small objects because a high-magnification lens is used. We present a method for full-field measurement of displacement, velocity, and acceleration of a vibrating miniature object based on image-plane digital holographic microscopy. A miniature cantilever beam is excited by a piezoelectric transducer stage with a sinusoidal configuration. A sequence of digital holograms is captured using a high-speed digital holographic microscope. Windowed Fourier analysis is applied in the spatial and spatiotemporal domains to extract the displacement, velocity and acceleration. The result shows that a combination of image-plane digital holographic microscopy and windowed Fourier analyses can be used to study vibration without encountering a phase ambiguity problem, and one can obtain instantaneous kinematic parameters on each point.
Collapse
Affiliation(s)
- Yu Fu
- Department of Mechanical Engineering, National University of Singapore, 9 Engineering Drive 1, Singapore.
| | | | | |
Collapse
|
14
|
Dubois F, Yourassowsky C, Callens N, Minetti C, Queeckers P. Applications of digital holographic microscopes with partially spatial coherence sources. ACTA ACUST UNITED AC 2008. [DOI: 10.1088/1742-6596/139/1/012027] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
|
15
|
Minetti C, Callens N, Coupier G, Podgorski T, Dubois F. Fast measurements of concentration profiles inside deformable objects in microflows with reduced spatial coherence digital holography. APPLIED OPTICS 2008; 47:5305-5314. [PMID: 18846168 DOI: 10.1364/ao.47.005305] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We investigate the use of a digital holographic microscope working with partially coherent spatial illumination to study concentration profiles inside confined deformable bodies flowing in microchannels. The studied phenomenon is rapidly changing in time and requires the recording of the complete holographic information for every frame. For this purpose, we implemented one of the classical methods of off-axis digital holography: the Fourier method. Digital holography allows one to numerically investigate a volume by refocusing the different planes of depth, allowing one to locate the objects under investigation in three dimensions. Furthermore, the phase is directly related to the refractive index, thus to the concentration inside the body. Based on simple symmetry assumptions, we present an original method for determining the concentration profiles inside deformable objects in microconfined flows. Details of the optical and numerical implementation, as well as exemplative experimental results are presented.
Collapse
Affiliation(s)
- Christophe Minetti
- Microgravity Research Center, Université Libre de Bruxelles, 50 Avenue F. Roosevelt, CP 165/62, B-1050 Brussels, Belgium.
| | | | | | | | | |
Collapse
|
16
|
Dubois F, Callens N, Yourassowsky C, Hoyos M, Kurowski P, Monnom O. Digital holographic microscopy with reduced spatial coherence for three-dimensional particle flow analysis. APPLIED OPTICS 2006; 45:864-71. [PMID: 16512527 DOI: 10.1364/ao.45.000864] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/06/2023]
Abstract
We investigate the use of a digital holographic microscope working in partially coherent illumination to study in three dimensions a micrometer-size particle flow. The phenomenon under investigation rapidly varies in such a way that it is necessary to record, for every camera frame, the complete holographic information for further processing. For this purpose, we implement the Fourier-transform method for optical amplitude extraction. The suspension of particles is flowing in a split-flow lateral-transport thin separation cell that is usually used to separate the species by their sizes. Details of the optical implementation are provided. Examples of reconstructed images of different particle sizes are shown, and a particle-velocity measurement technique that is based on the blurred holographic image is exploited.
Collapse
Affiliation(s)
- Frank Dubois
- Université Libre de Bruxelles, Chimie Physique CP 165-62, Avenue Franklin Roosevelt 50, B1050 Brussels, Belgium.
| | | | | | | | | | | |
Collapse
|
17
|
Monnom O, Dubois F, Yourassowsky C, Legros JC. Improvement in visibility of an in-focus reconstructed image in digital holography by reduction of the influence of out-of-focus objects. APPLIED OPTICS 2005; 44:3827-32. [PMID: 15989058 DOI: 10.1364/ao.44.003827] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
When a reconstruction is performed on a digital holographic image that contains small objects at different depths, diffraction that is due to out-of-focus objects disrupts the visibility of the nearby focused objects. We propose a method to substitute for focused object amplitudes other amplitudes that will reduce propagation diffraction effects when other depths are investigated. The replacement amplitudes are computed by use of an algorithm that reduces the highest spatial frequencies of the resultant image. The theoretical aspects of the method are presented, and results for simulated and experimental examples are shown.
Collapse
Affiliation(s)
- O Monnom
- Microgravity Research Center, Université Libre de Bruxelles, 50 Avenue F. Roosevelt CP165/62, 1050 Brussels, Belgium.
| | | | | | | |
Collapse
|
18
|
Dubois F, Requena MLN, Minetti C, Monnom O, Istasse E. Partial spatial coherence effects in digital holographic microscopy with a laser source. APPLIED OPTICS 2004; 43:1131-9. [PMID: 15008493 DOI: 10.1364/ao.43.001131] [Citation(s) in RCA: 31] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
We investigate a digital holographic microscope that permits us to modify the spatial coherence state of the sample illumination by changing the spot size of a laser beam on a rotating ground glass. Out-of-focus planes are refocused by digital holographic reconstruction with numerical implementation of the Kirchhoff-Fresnel integral. The partial coherence nature of the illumination reduces the coherent artifact noise with respect to fully coherent illumination. The investigated configuration allows the spatial coherence state to be changed without modifying the illumination level of the sample. The effect of the coherence state on the digital holographic reconstruction is theoretically and experimentally evaluated. We also show how multiple reflection interferences are limited by the use of reduced spatial coherent illumination.
Collapse
Affiliation(s)
- Frank Dubois
- Université Libre de Bruxelles, Microgravity Research Center, 50 Avenue F. Roosevelt, CP 165/62, B-1050, Brussels, Belgium.
| | | | | | | | | |
Collapse
|