Spectral attenuation and backscattering as indicators of average particle size

Bayesian approach to a generalized inherent optical property model

Relationships between the absorption and backscattering coefficients of marine optical constituents and ocean color, or remote sensing reflectances R_rs(λ), can be used to predict the concentrations of these constituents in the upper water column. Standard inverse modeling techniques that minimize error between the modeled and observed R_rs(λ) break down when the number of products retrieved becomes similar to, or greater than, the number of different ocean color wavelengths measured. Furthermore, most conventional ocean reflectance inversion approaches, such as the default configuration of NASA's Generalized Inherent Optical Properties algorithm framework (GIOP-DC), require a priori definitions of absorption and backscattering spectral shapes. A Bayesian approach to GIOP is implemented here to address these limitations, where the retrieval algorithm minimizes both the error in retrieved ocean color and the deviation from prior knowledge, calculated using output from a mixture of empirically-derived and best-fit values. The Bayesian approach offers potential to produce an expanded range of parameters related to the spectral shape of absorption and backscattering spectra.

Variability of Marine Particle Size Distributions and the Correlations with Inherent Optical Properties in the Coastal Waters of the Northern South China Sea

Particle size distribution (PSD), which is an important characteristic of marine suspended particles, plays a role in how light transfers in the ocean and impacts the ocean’s inherent optical properties (IOPs). However, PSD properties and the correlations with IOPs are rarely reported in coastal waters with complex optical properties. This study investigated the PSD variabilities both for the surface water and the water in vertical planes, and the correlations between PSD and the backscattering coefficient (bbp), scattering coefficient (bp), and attenuation coefficient (cp), based on in situ PSD observations (within a size range of 2.05–297 μm) and IOPs in the coastal northern South China Sea. The results show a large variety of PSDs, with a range of 41.06–263.02 μm for the median particle diameter (Dv50) and a range of 2.61–3.74 for the PSD slope. In addition, the predominance of small particles is most likely to appear in the nearshore shallow water and estuaries with a large amount of sediment discharge, and vice versa. For the variabilities of IOPs, the particle concentration in a cross-sectional area (AC) is the first driving factor of the variations of bbp, bp, and cp, and the product of the mean particle diameter (DA) and the apparent density (ρa) can explain most variations of the mass-specific bbp (bbp/SPM), bp (bp/SPM), and cp (cp/SPM). In this study, we found that particle size is strongly correlated with volume-specific bbp (bbp/VC), bp (bp/VC), and cp (cp/VC), and the 10th percentile diameter of the accumulated volume concentration (Dv10) can better explain the variations of bbp/VC. These findings suggest a potential PSD retrieval method utilizing the bbp or bp, which may be determined by remote sensing observations.

Characterization of suspended particulate matter in contrasting coastal marine environments with angle-resolved polarized light scattering measurements

Optical proxies based on light scattering measurements have potential to improve the study and monitoring of aquatic environments. In this study, we evaluated several optical proxies for characterization of particle mass concentration, composition, and size distribution of suspended particulate matter from two contrasting coastal marine environments. We expanded upon our previous study of Southern California coastal waters, which generally contained high proportions of organic particles, by conducting angle-resolved polarized light scattering measurements in predominantly turbid and inorganic-particle dominated Arctic coastal waters near Prudhoe Bay, Alaska. We observed that the particulate backscattering coefficient b_bp was the most effective proxy for the mass concentration of suspended particulate matter (SPM) when compared with particulate scattering and attenuation coefficients b_p and c_p. Improvements were seen with b_bp as a proxy for the concentration of particulate organic carbon (POC), although only if particulate assemblages were previously classified in terms of particle composition. We found that the ratio of polarized-light scattering measurements at 110º and 18º was superior in performance as a proxy for the composition parameter POC/SPM in comparison to the particulate backscattering ratio b_bp/b_p. The maximum value of the degree of linear polarization DoLP_p,max observed within the range of scattering angles 89°-106° was found to provide a reasonably good proxy for a particle size parameter (i.e., 90th percentile of particle volume distribution) which characterizes the proportions of small- and large-sized particles. These findings can inform the development of polarized light scattering sensors to enhance the capabilities of autonomous platforms.

A Four-Step Method for Estimating Suspended Particle Size Based on In Situ Comprehensive Observations in the Pearl River Estuary in China

The suspended particle size has great impacts on marine biology environments and biogeochemical processes, such as the settling rates of particles and sunlight transmission in marine water. However, the spatial–temporal variations in particle sizes in coastal waters are rarely reported due to the paucity of appropriate observations and the limitations of particle size retrieval methods, especially in areas with complex optical properties. This study proposed a remote sensing-based method for estimating the median particle size Dv50 (calculated with a size range of 2.05–297 μm) that correlates Dv50 with the inherent optical properties (IOPs) retrieved from in situ remote sensing reflectance above the water’s surface (Rrs(λ)) in the Pearl River estuary (PRE) in China. Rrs(λ) was resampled to simulate the Multispectral Instrument (MSI) onboard Sentinel-2A/B, and the wavebands in 490, 560, and 705 nm were utilized for the retrieval of the IOPs. The results of this method had a statistical performance of 0.86, 18.52, 21.28%, and −1.85 for the R2, RMSE, MAPE, and bias values, respectively, in validation, which indicated that Dv50 could be estimated by Rrs(λ) with the proposed four-step method. Then, the proposed method was applied to Sentinel-2 MSI imagery, and a clear difference in Dv50 distribution which was retrieved from a different time could be seen. The proposed method holds great potential for monitoring the suspended particle size of coastal waters.

Variability in Oceanic Particle Size Distributions and Estimation of Size Class Contributions Using a Non-parametric Approach

A dataset of nearly 400 measurements of the particle size distribution (PSD) compiled from the Pacific, Atlantic, and Arctic Oceans is used to examine variability in the magnitude and shape of the PSD, and to characterize the partitioning of particle number, cross-sectional area, and volume concentration among defined size intervals. The results indicate that the relative contributions of three size classes based upon the pico-, nano-, and microplankton size range exhibit substantial changes among measures of particle size and between oceanic environments. The single-slope power law model commonly employed to characterize the PSD in aquatic studies is demonstrated to have significant limitations in capturing the complexity of PSD shapes observed for natural particle assemblages, and in consequence poorly predicts the relative contributions of these different size intervals. We show that specific percentile diameters derived from the cumulative distributions of particle size are strongly correlated with the contributions of these three size classes, and that these non-parametric descriptors of the cumulative distribution provide superior performance for estimating their contributions while requiring no assumption of underlying PSD shape. A comparison of these predictive relationships with independent field measurements suggests that this approach is generally robust for particle assemblages representing a wide diversity of marine environments.

Speckle Analyzer: open-source package in MATLAB for finding metrics of physical quantities based on laser speckle pattern analyzing

We provide an open-source user-friendly graphical-user interface software in a MATLAB environment, named Speckle Analyzer, as a tool for calculating and analyzing statistical parameters of a laser speckle pattern to find metrics for an object's physical quantity. The first- and second-order statistical functions containing gray-level co-occurrence and gray-level run-length matrices and speckle grains geometrical properties are included in Speckle Analyzer. To validate the software's operation, statistical parameters of the laser speckle pattern, to find metrics for the size and concentration of particles suspended in liquid, are investigated.

The Imprint of Primary Production on High-Frequency Profiles of Lake Optical Properties

Water inherent optical properties (IOPs) contain integrative information on the optical constituents of surface waters. In lakes, IOP measurements have not been traditionally collected. This study describes how high-frequency IOP profiles can be used to document short-term physical and biogeochemical processes that ultimately influence the long-term trajectory of lake ecosystems. Between October 2018 and May 2020, we collected 1373 high-resolution hyperspectral IOP profiles in the uppermost 50 m of the large mesotrophic Lake Geneva (Switzerland-France), using an autonomous profiler. A data set of this size and content does not exist for any other lake. Results showed seasonal variations in the IOPs, following the expected dynamic of phytoplankton. We found systematic diel patterns in the IOPs. Phases of these diel cycles were consistent year-round, and amplitudes correlated to the diurnal variations of dissolved oxygen, clarifying the link between IOPs and phytoplankton metabolism. Diel amplitudes were largest in spring and summer under low wind condition. Wind-driven changes in thermal stratification impacted the dynamic of the IOPs, illustrating the potential of high-frequency profiles of water optical properties to increase our understanding of carbon cycling in lake ecosystems.

Release of particles and metals into seawater following sediment resuspension of a coastal mine tailings disposal off Portmán Bay, Southern Spain

Portmán Bay in Southern Spain is one of the most extreme cases in Europe of anthropogenic impact on the marine ecosystem by the disposal of mine tailings resulting from the processing of sulphide ores. First, the composition and extent of the surficial deposit were investigated from geochemical and metal analysis on high spatial density of sediment samples. Then, a disturbance experiment was conducted in the coastal area off Portmán Bay in order to investigate the potential impact of mining activities on marine ecosystems. Two research vessels were used for that experiment, one performing as a trawler resuspending bottom sediments while the other monitor the behaviour of turbid plumes thus generated and the evolution of their characteristics through time by using a range of acoustic and optical tools together with water and bottom sediment sampling for biogeochemical and metal analyses. The surficial part of the submarine extension of the mine tailings deposit is highly concentrated in As, Cd, Pb, Fe and Zn with peak concentrations adjacent to the present coastline, from where they decrease seawards before reaching average values for the Mediterranean Sea around 50-m water depth. The artificially triggered resuspension of the surface layer of the deposit led to the formation of resuspension plume about 100 m in width and up to 6 m in height. Resuspended plume was composed of fine particles which rapidly aggregated into flocs of 100 μm. While the biggest particles settled rapidly, the finest fraction remained in suspension during at least 3 h. Resuspended sediment and metal concentrations in particles remained at relatively high levels throughout the experiments following triggering. Fe, Pb, and As concentrations in resuspended particles showed a continuous increase while trawling before decreasing in parallel with the settling down of the resuspended sediments. Those metals have higher affinity with fine particles than with coarse ones, so that while the coarsest fraction from sediment plumes settled first, the finest fraction remained in suspension thus increasing the metals/sediments concentration ratio. On the other hand, Cd and Zn concentrations in suspended particles did not change significantly over time, which is thought to be caused by the fast dissolution of such metals in seawater. Beyond waste dumping itself, the observed increase in some metals in marine particulate material could have a significant impact on the adjacent coastal ecosystems due to their toxicity above certain thresholds. The consequences of the resuspension experiment here presented can be extrapolated to the impact of seafloor mining activities leading to the resuspension of metal-rich particle plumes into the water column. The experimental set-up presented here may be further explored for investigating metal behaviour during seafloor mining activities.

A Semi-Analytical Optical Remote Sensing Model to Estimate Suspended Sediment and Dissolved Organic Carbon in Tropical Coastal Waters Influenced by Peatland-Draining River Discharges off Sarawak, Borneo

Coastal water quality degradation is a global challenge. Marine pollution due to suspended sediments and dissolved matter impacts water colour, biogeochemistry, benthic habitats and eventually human populations that depend on marine resources. In Sarawak (Malaysian Borneo), peatland-draining river discharges containing suspended sediments and dissolved organic carbon influence coastal water quality at multiple locations along the coast. Optical remote sensing is an effective tool to monitor coastal waters over large areas and across remote geographic locations. However, the lack of regional optical measurements and inversion models limits the use of remote sensing observations for water quality monitoring in Sarawak. To overcome this limitation, we have (1) compiled a regional spectral optical library for Sarawak coastal waters, (2) developed a new semi-analytical remote sensing model to estimate suspended sediment and dissolved organic carbon in coastal waters, and (3) demonstrated the application of our remote sensing inversion model on satellite data over Sarawak. Bio-optical data analysis revealed that there is a clear spatial variability in the inherent optical properties of particulate and dissolved matter in Sarawak. Our optical inversion model coupled with the Sarawak spectral optical library performed well in retrieving suspended sediment (bias = 3% and MAE = 5%) and dissolved organic carbon (bias = 3% and MAE = 8%) concentrations. Demonstration products using MODIS Aqua data clearly showed the influence of large rivers such as the Rajang and Lupar in discharging suspended sediments and dissolved organic carbon into coastal waters. The bio-optical parameterisation, optical model, and remote sensing inversion approach detailed here can now help improve monitoring and management of coastal water quality in Sarawak.

Drivers of spectral optical scattering by particles in the upper 500 m of the Atlantic Ocean

Optical models have been proposed to relate spectral variations in the beam attenuation (c_p) and optical backscattering (b_bp) coefficients to marine particle size distributions (PSDs). However, due to limited PSD data, particularly in the open ocean, optically derived PSDs suffer from large uncertainties and we have a poor empirical understanding of the drivers of spectral c_p and b_bp coefficients. Here we evaluated PSD optical proxies and investigated their drivers by analyzing an unprecedented dataset of co-located PSDs, phytoplankton abundances and optical measurements collected across the upper 500 m of the Atlantic Ocean. The spectral slope of c_p was correlated (r>0.59) with the slope of the PSD only for particles with diameters >1 µm and also with eukaryotic phytoplankton concentrations. No significant relationships between PSDs and the spectral slope of b_bp were observed. In the upper 200 m, the b_bp spectral slope was correlated to the light absorption by particles (a_p; r<-0.54) and to the ratio of cyanobacteria to eukaryotic phytoplankton. This latter correlation was likely the consequence of the strong relationship we observed between a_p and the concentration of eukaryotic phytoplankton (r=0.83).

Classification of Australian Waterbodies across a Wide Range of Optical Water Types

Baseline determination and operational continental scale monitoring of water quality are required for reporting on marine and inland water progress to Sustainable Development Goals (SDG). This study aims to improve our knowledge of the optical complexity of Australian waters. A workflow was developed to cluster the modelled spectral response of a range of in situ bio-optical observations collected in Australian coastal and continental waters into distinct optical water types (OWTs). Following clustering and merging, most of the modelled spectra and modelled specific inherent optical properties (SIOP) sets were clustered in 11 OWTs, ranging from clear blue coastal waters to very turbid inland lakes. The resulting OWTs were used to classify Sentinel-2 MSI surface reflectance observations extracted over relatively permanent water bodies in three drainage regions in Eastern Australia. The satellite data classification demonstrated clear limnological and seasonal differences in water types within and between the drainage divisions congruent with general limnological, topographical, and climatological factors. Locations of unclassified observations can be used to inform where in situ bio-optical data acquisition may be targeted to capture a more comprehensive characterization of all Australian waters. This can contribute to global initiatives like the SDGs and increases the diversity of natural water in global databases.

Particle Size Parameters of Particulate Matter Suspended in Coastal Waters and Their Use as Indicators of Typhoon Influence

The power law particle size distribution (PSD) slope parameter is commonly used to characterize sediment fluxes, resuspension, aggregates, and settling rates in coastal and estuarine waters. However, particle size distribution metrics are also very useful for understanding sediment source and dynamic processes. In this study, a method was proposed to employ the particle size parameters commonly used in sedimentary geology (average particle size (ø), sorting, skewness, and kurtosis) as indicators of changes in sediment dynamic processes, and MODIS images were used to estimate these parameters. The particle size parameters were estimated using a Mie scattering model, Quasi-Analytical Algorithm (QAA) analysis algorithm, and least squares QR decomposition (LSQR) solution method based on the relationship between the power law distribution of the suspended particles and their optical scattering properties. The estimates were verified by field measurements in the Yellow Sea and Bohai Sea regions of China. This method provided good estimates of the average particle size (ø), sorting, and kurtosis. A greater number of wavebands (39) was associated with more accurate particle size distribution curves. Furthermore, the method was used to monitor changes in suspended particulate matter in the vicinity of the Heini Bay of China before and after the passage of a strong storm in August 2011. The particle size parameters represented the influence of a strong typhoon on the distribution of the near-shore sediment and, together with the PSD slope, comprehensively reflected the changes in the near-shore suspended particulate matter. This method not only established the relationship between remote sensing monitoring and the historical sediment record, it also extends the power law model to the application of sediment source and dynamic processes in coastal waters.

An Algorithm to Estimate Suspended Particulate Matter Concentrations and Associated Uncertainties from Remote Sensing Reflectance in Coastal Environments

Suspended Particulate Matter (SPM) is a major constituent in coastal waters, involved in processes such as light attenuation, pollutant propagation, and waterways blockage. The spatial distribution of SPM is an indicator of deposition and erosion patterns in estuaries and coastal zones and a necessary input to estimate the material fluxes from the land through rivers to the sea. In-situ methods to estimate SPM provide limited spatial data in comparison to the coverage that can be obtained remotely. Ocean color remote sensing complements field measurements by providing estimates of the spatial distributions of surface SPM concentration in natural waters, with high spatial and temporal resolution. Existing methods to obtain SPM from remote sensing vary between purely empirical ones to those that are based on radiative transfer theory together with empirical inputs regarding the optical properties of SPM. Most algorithms use a single satellite band that is switched to other bands for different ranges of turbidity. The necessity to switch bands is due to the saturation of reflectance as SPM concentration increases. Here we propose a multi-band approach for SPM retrievals that also provides an estimate of uncertainty, where the latter is based on both uncertainties in reflectance and in the assumed optical properties of SPM. The approach proposed is general and can be applied to any ocean color sensor or in-situ radiometer system with red and near-infra-red bands. We apply it to six globally distributed in-situ datasets of spectral water reflectance and SPM measurements over a wide range of SPM concentrations collected in estuaries and coastal environments (the focus regions of our study). Results show good performance for SPM retrieval at all ranges of concentration. As with all algorithms, better performance may be achieved by constraining empirical assumptions to specific environments. To demonstrate the flexibility of the algorithm we apply it to a remote sensing scene from an environment with highly variable sediment concentrations.

Evaluation of Particle Size Distribution Metrics to Estimate the Relative Contributions of Different Size Fractions Based on Measurements in Arctic Waters

The size distribution of suspended particles influences several processes in aquatic ecosystems, including light propagation, trophic interactions, and biogeochemical cycling. The shape of the particle size distribution (PSD) is commonly modeled as a single-slope power law in oceanographic studies, which can be used to further estimate the relative contributions of different particle size classes to particle number, area, and volume concentration. We use a data set of 168 high size-resolution PSD measurements in Arctic oceanic waters to examine variability in the shape of the PSD over the particle diameter range 0.8 to 120 μm. An average value of -3.6 ± 0.33 was obtained for the slope of a power law fitted over this size range, consistent with other studies. Our analysis indicates, however, that this model has significant limitations in adequately parameterizing the complexity of the PSD, and thus performs poorly in predicting the relative contributions of different size intervals such as those based on picoplankton, nanoplankton, and microplankton size classes. Similarly, median particle size was also generally a poor indicator of these size class contributions. Our results suggest that alternative percentile diameters derived from the cumulative distribution functions of particle number, cross-sectional area, and volume concentration may provide better metrics to capture the overall shape of the PSD and to quantify the contributions of different particle size classes.

Variability of relationship between the volume scattering function at 180° and the backscattering coefficient for aquatic particles

Properly interpreting lidar (light detection and ranging) signal for characterizing particle distribution relies on a key parameter, χ_p(π), which relates the particulate volume scattering function (VSF) at 180° (β_p(π)) that a lidar measures to the particulate backscattering coefficient (b_bp). However, χ_p(π) has been seldom studied due to challenges in accurately measuring β_p(π) and b_bp concurrently in the field. In this study, χ_p(π), as well as its spectral dependence, was re-examined using the VSFs measured in situ at high angular resolution in a wide range of waters. β_p(π), while not measured directly, was inferred using a physically sound, well-validated VSF-inversion method. The effects of particle shape and internal structure on the inversion were tested using three inversion kernels consisting of phase functions computed for particles that are assumed as homogenous sphere, homogenous asymmetric hexahedra, or coated sphere. The reconstructed VSFs using any of the three kernels agreed well with the measured VSFs with a mean percentage difference <5% at scattering angles <170^∘. At angles immediately near or equal to 180°, the reconstructed β_p(π) depends strongly on the inversion kernel. χ_p(π) derived with the sphere kernels was smaller than those derived with the hexahedra kernel but consistent with χ_p(π) estimated directly from high-spectral-resolution lidar and in situ backscattering sensor. The possible explanation was that the sphere kernels are able to capture the backscattering enhancement feature near 180° that has been observed for marine particles. χ_p(π) derived using the coated sphere kernel was generally lower than those derived with the homogenous sphere kernel. Our result suggests that χ_p(π) is sensitive to the shape and internal structure of particles and significant error could be induced if a fixed value of χ_p(π) is to be used to interpret lidar signal collected in different waters. On the other hand, χ_p(π) showed little spectral dependence.

Retrieval of Particulate Backscattering Using Field and Satellite Radiometry: Assessment of the QAA Algorithm

Particulate optical backscattering (bbp) is a crucial parameter for the study of ocean biology and oceanic carbon estimations. In this work, bbp retrieval, by the quasi-analytical algorithm (QAA), is assessed using a large in situ database of matched bbp and remote-sensing reflectance (Rrs). The QAA is also applied to satellite Rrs (ESA OC-CCI project) as well, after their validation against in situ Rrs. Additionally, the effect of Raman Scattering on QAA retrievals is studied. Results show negligible biases above random noise when QAA-derived bbp is compared to in situ bbp. In addition, Rrs from the CCI archive shows good agreement with in situ data. The QAA’s functional form of spectral backscattering slope, as derived from in situ radiometry, is validated. Finally, we show the importance of correcting for Raman Scattering over clear waters prior to semi-analytical retrieval. Overall, this work demonstrates the high efficiency of QAA in the bbp detection in case of both in situ and ocean color data, but it also highlights the necessity to increase the number of observations that are severely under-sampled in respect to others environmental parameters.

Linking flow-stream variability to grain size distribution of suspended sediment from a satellite-based analysis of the Tiber River plume (Tyrrhenian Sea)

Several coastal regions on Earth have been increasingly affected by intense, often catastrophic, flash floods that deliver significant amounts of sediment along shorelines. One of the critical questions related to the impact of these impulsive runoffs is "are flash floods more efficient in delivering non-cohesive sandy sediment along the coasts?" Here we relate flow stages (i.e., from erratic to persistent) to the grain size distribution of the suspended load, by performing a synergic analysis of in-situ river discharge and satellite-retrieved grain size distribution, from 2002 to 2014, covering the 2012 Tiber River (Italy) exceptional flood event. Our analysis shows novel and promising results regarding the capability of remote sensing in characterizing suspended sediment in terms of grain size distribution and reveals that erratic stages favour delivering of non-cohesive sandy sediment more than the persistent stages. This conclusion is supported by numerical simulations and is consistent with previous studies on suspended sediment rating curves.

Optical characterization of marine phytoplankton assemblages within surface waters of the western Arctic Ocean

An extensive data set of measurements within the Chukchi and Beaufort Seas is used to characterize the optical properties of seawater associated with different phytoplankton communities. Hierarchical cluster analysis of diagnostic pigment concentrations partitioned stations into four distinct surface phytoplankton communities based on taxonomic composition and average cell size. Concurrent optical measurements of spectral absorption and backscattering coefficients and remote-sensing reflectance were used to characterize the magnitudes and spectral shapes of seawater optical properties associated with each phytoplankton assemblage. The results demonstrate measurable differences among communities in the average spectral shapes of the phytoplankton absorption coefficient. Similar or smaller differences were also observed in the spectral shapes of nonphytoplankton absorption coefficients and the particulate backscattering coefficient. Phytoplankton on average, however, contributed only 25% or less to the total absorption coefficient of seawater. Our analyses indicate that the interplay between the magnitudes and relative contributions of all optically significant constituents generally dampens any influence of varying phytoplankton absorption spectral shapes on the total absorption coefficient, yet there is still a marked discrimination observed in the spectral shape of the ratio of the total backscattering to total absorption coefficient and remote-sensing reflectance among the phytoplankton assemblages. These spectral variations arise mainly from differences in the bio-optical environment in which specific communities were found, as opposed to differences in the spectral shapes of phytoplankton optical properties per se. These results suggest potential approaches for the development of algorithms to assess phytoplankton community composition from measurements of seawater optical properties in western Arctic waters.

Water Column Optical Properties of Pacific Coral Reefs Across Geomorphic Zones and in Comparison to Offshore Waters

Despite the traditional view of coral reefs occurring in oligotrophic tropical conditions, water optical properties over coral reefs differ substantially from nearby clear oceanic waters. Through an extensive set of optical measurements across the tropical Pacific, our results suggest that coral reefs themselves exert a high degree of influence over water column optics, primarily through release of colored dissolved organic matter (CDOM). The relative contributions of phytoplankton, non-algal particles, and CDOM were estimated from measurements of absorption and scattering across different geomorphic shallow-water reef zones (<10 m) in Hawaii, the Great Barrier Reef, Guam, and Palau (n = 172). Absorption was dominated at the majority of stations by CDOM, with mixtures of phytoplankton and CDOM more prevalent at the protected back reef and lagoon zones. Absorption could be dominated by sediments and phytoplankton at fringing reefs and terrestrially impacted sites where particulate backscattering was significantly higher than in the other zones. Scattering at three angles in the backward direction followed recent measurements of the particulate phase function. Optical properties derived from satellite imagery indicate that offshore waters are consistently lower in absorption and backscattering than reef waters. Therefore, the use of satellite-derived offshore parameters in modeling reef optics could lead to significant underestimation of absorption and scattering, and overestimation of benthic light availability. If local measurements are not available, average optical properties based on the general reef zone could provide a more accurate means of assessing light conditions on coral reefs than using offshore water as a proxy.

Optimal Cyanobacterial Pigment Retrieval from Ocean Colour Sensors in a Highly Turbid, Optically Complex Lake

To date, several algorithms for the retrieval of cyanobacterial phycocyanin (PC) from ocean colour sensors have been presented for inland waters, all of which claim to be robust models. To address this, we conducted a comprehensive comparison to identify the optimal algorithm for retrieval of PC concentrations in the highly optically complex waters of Lake Balaton (Hungary). MEdium Resolution Imaging Spectrometer (MERIS) top-of-atmosphere radiances were first atmospherically corrected using the Self-Contained Atmospheric Parameters Estimation for MERIS data v.B2 (SCAPE-M_B2). Overall, the Simis05 semi-analytical algorithm outperformed more complex inversion algorithms, providing accurate estimates of PC up to ±7 days from the time of satellite overpass during summer cyanobacteria blooms (RMSElog < 0.33). Same-day retrieval of PC also showed good agreement with cyanobacteria biomass (R2 > 0.66, p < 0.001). In-depth analysis of the Simis05 algorithm using in situ measurements of inherent optical properties (IOPs) revealed that the Simis05 model overestimated the phytoplankton absorption coefficient [aph(λ)] by a factor of ~2. However, these errors were compensated for by underestimation of the mass-specific chlorophyll absorption coefficient [a*chla(λ)]. This study reinforces the need for further validation of algorithms over a range of optical water types in the context of the recently launched Ocean Land Colour Instrument (OLCI) onboard Sentinel-3.

Variability of particulate backscattering ratio and its relations to particle intrinsic features in the Bohai Sea, Yellow Sea, and East China Sea

Using two field cruise observations collected during September and December 2016 in the Bohai Sea (BS), Yellow Sea (YS), and East China Sea (ECS), our study explores the variability of the particulate backscattering ratio (i.e., a ratio of particulate backscattering, b_bp in m^-1, to particulate scattering, b_p in m^-1, denoted as b˜_bp, dimensionless). A large variation of b˜_bp (using 550 nm as a delegate) in magnitude is observed in the study regions, ranging from 0.0004 to 0.043 (with an average of 0.015 ± 0.0082), which implies optically complex water conditions. Spectral variation in b˜_bp is analyzed quantitatively by our proposed so-called "spectral dependence index," K, recommended as a standard way to determine quantitatively the spectral dependence of b˜_bp in water bodies worldwide. The driving mechanism on the b˜_bp variability in the study regions is researched for the first time, based on those synchronous data on particle intrinsic attributes, herein mainly referring to particle concentration (TSM, for the content of total suspended matter), composition (using a ratio of Chla/TSM as a surrogate, where Chla refers to the content of chlorophyll a), mean particle size (D_A), and mean apparent density (ρ_a). The TSM, Chla/TSM, and D_A cumulatively contribute most (97.8%) of the b˜_bp variability, while other factors, such as the ρ_a, show a weak influence (0.04%). Meanwhile, we model b˜_bp with direct linkages to TSM, Chla/TSM, and D_A by using a linear regression method, with low estimation errors (such as mean absolute percentage error, MAPE, of about 14%). In short, our findings promote an understanding on the essence of the b˜_bp in the BS, YS, and ECS, and are significantly beneficial to the comprehensive grasp of those complex features on suspended particles and those related to biogeochemical processes in marine waters.

The open-ocean missing backscattering is in the structural complexity of particles

Marine microscopic particles profoundly impact global biogeochemical cycles, but our understanding of their dynamics is hindered by lack of observations. To fill this gap, optical backscattering measured by satellite sensors and in-situ autonomous platforms can be exploited. Unfortunately, these observations remain critically limited by an incomplete mechanistic understanding of what particles generate the backscattering signal. To achieve this understanding, optical models are employed. The simplest of these models—the homogeneous sphere—severely underestimates the measured backscattering and the missing signal has been attributed to submicron particles. This issue is known as the missing backscattering enigma. Here we show that a slightly more complex optical model—the coated sphere—can predict the measured backscattering and suggests that most of the signal comes from particles >1 µm. These findings were confirmed by independent size-fractionation experiments. Our results demonstrate that the structural complexity of particles is critical to understand open-ocean backscattering and contribute to solving the enigma.

Particulate optical backscattering is key to studying the oceanic carbon pump though it remains unclear what particles are detected. Here the authors show that complex particles larger than 1 µm help reproduce all the measured backscattering across the Atlantic Ocean and explain the majority of the signal.

Advantages and Limitations to the Use of Optical Measurements to Study Sediment Properties

Measurements of optical properties have been used for decades to study particle distributions in the ocean. They are useful for estimating suspended mass concentration as well as particle-related properties such as size, composition, packing (particle porosity or density), and settling velocity. Measurements of optical properties are, however, biased, as certain particles, because of their size, composition, shape, or packing, contribute to a specific property more than others. Here, we study this issue both theoretically and practically, and we examine different optical properties collected simultaneously in a bottom boundary layer to highlight the utility of such measurements. We show that the biases we are likely to encounter using different optical properties can aid our studies of suspended sediment. In particular, we investigate inferences of settling velocity from vertical profiles of optical measurements, finding that the effects of aggregation dynamics can seldom be ignored.

Validation of the particle size distribution obtained with the laser in-situ scattering and transmission (LISST) meter in flow-through mode

High spatial and temporal resolution estimates of the particle size distribution (PSD) in the surface ocean can enable improved understanding of biogeochemistry and ecosystem dynamics. Oceanic PSD measurements remain rare due to the time-consuming, manual sampling methods of common particle sizing instruments. Here, we evaluate the utility of measuring particle size data at high spatial resolution with a commercially-available submersible laser diffraction particle sizer (LISST-100X, Sequoia Scientific), operating in an automated mode with continuously flowing seawater. The LISST PSD agreed reasonably well with discrete PSD measurements obtained with a Coulter Counter and data from the flow-through sampling Imaging Flow-Cytobot, validating our methodology. Total particulate area and Volume derived from the LISST PSD agreed well with beam-attenuation and particulate organic carbon respectively, further validating the LISST PSD. Furthermore, When compared to the measured spectral characteristics of particulate beam attenuation, we find a significant correlation. However, no significant relationship between the PSD and spectral particulate backscattering was found.

Hyperspectral absorption and backscattering coefficients of bulk water retrieved from a combination of remote-sensing reflectance and attenuation coefficient

Absorption (a) and backscattering (bb) coefficients play a key role in determining the light field; they also serve as the link between remote sensing and concentrations of optically active water constituents. Here we present an updated scheme to derive hyperspectral a and bb with hyperspectral remote-sensing reflectance (Rrs) and diffuse attenuation coefficient (Kd) as the inputs. Results show that the system works very well from clear open oceans to highly turbid inland waters, with an overall difference less than 25% between these retrievals and those from instrument measurements. This updated scheme advocates the measurement and generation of hyperspectral a and bb from hyperspectral Rrs and Kd, as an independent data source for cross-evaluation of in situ measurements of a and bb and for the development and/or evaluation of remote sensing algorithms for such optical properties.

Variability in the backscattering efficiency of particles in the Bohai and Yellow Seas and related effects on optical properties

The backscattering efficiency of particles is a crucial factor that relates light backscattering with biogeochemical properties. In this study, based on in situ measurements of the backscattering coefficient (b_bp(λ)), particle biogeochemical variables and remote sensing reflectance (R_rs(λ)) in two typical shallow and semi-enclosed seas, namely the Bohai Sea (BS) and Yellow Sea (YS) during the late spring, late summer and late autumn, we examined particulate pseudo-backscattering efficiency variability at 640 nm (P_Q_bbe(640)) and related optical effects. The results show that the P_Q_bbe(640) levels varied by nearly two orders for all of the samples examined. This high degree of P_Q_bbe(640) variability significantly affected b_bp(640) and the mass-specific backscattering coefficient (b_bp*(640)), showing that approximately 63.7% and 20.8% of the variability in the b_bp*(640) and b_bp(640) was attributed to the P_Q_bbe(640), respectively. More importantly, consistent with the observations of Wang et al. [J. Geophys. Res.: Oceans 121, 3955 (2016)], the P_Q_bbe(640) results clearly showed two clusters and this clustering changed the relationships between b_bp*(640), b_bp(640) and R_rs(640) with the biogeochemical variables. However, we confirm that P_Q_bbe(640) clustering generally remained intact across seasons. Therefore, a simple scheme based on a threshold of the P_Q_bbe(640) data is proposed for the classification of particle types. With this classification, impacts of P_Q_bbe(640) on b_bp*(640) and b_bp(640) were clearly reduced, and co-variation trends of b_bp*(640), b_bp(640) and R_rs(640) with biogeochemical variables can be in turn more accurately described. Overall, this study provides general information on P_Q_bbe(640) variability in the BS and the YS and consequent effects on optical properties. The scheme for particle type classification may also provide a useful basis for better modeling marine biogeochemical processes related to particulate backscattering and for the development of ocean color algorithms.

Assessing the link between chlorophyll concentration and absorption line height at 676 nm over a broad range of water types

The relationship between absorption at 676 nm normalized to chlorophyll-a, i.e., specific absorption aph*(676), and various optical and environmental properties is examined in extensive data sets from Case I and Case II waters found globally to assess drivers of variability such as pigment packaging. A better understanding of this variability could lead to more accurate estimates of chlorophyll concentrations from in situ optical measurements that may be made autonomously. Values of aph*(676) ranged from 0.00006 to 0.0944 m²/mg Chl a across all sites studied, but converged on median and mean values (n = 563) of 0.0108 and 0.0139 m²/mg Chl a respectively, with no apparent relationship with various optical properties, latitude, coastal or open ocean environment, depth, temperature, salinity, photoadaptation, ecosystem health, or albedo. Relative consistency in aph* across such diverse water types and the full range in chlorophyll concentration suggests a single aph* may be used to estimate chlorophyll concentration from absorption measurements with better accuracy than currently thought.

Variability of particle size distribution with respect to inherent optical properties in Poyang Lake, China

Suspended particulate matter plays a significant role in the studies of sediment fluxes, phytoplankton dynamics, and water optical properties. This study focuses on the relationships between particle size distribution (PSD), water's inherent optical properties (IOPs), and water constituents. We investigated the complex waters of Poyang Lake, the largest freshwater lake in China, in wet and dry seasons during 2008-2011. Because of the distinct temporal-spatial variation of Poyang Lake, these parameters and relationships also demonstrate seasonal and regional variability. The variation range of the concentration of suspended particulate matter is 0.32-69.08  mg/l, with a mean value of 22.21  mg/l. The median particle size in the dry season is much larger than that of the wet season. The Junge distribution fits the PSD of Poyang Lake very well in the scope of 6.21-331 μm. Furthermore, the slopes of the PSD range from 3.54 to 4.69, with a mean value of 4.11, with the steepest slopes (>4.5) occurring in the waters around Songmen Mountain Island and the northern waterway. A negative correlation was found between median particle size (D_v50) and the mass-specific absorption coefficient at 443 nm [apm(443)] for both wet and dry seasons. Identical to analogous waters, the spectral slopes of the PSD correlate well with the spectral slopes of the attenuation coefficient, but with different fitted formulas. In the dry season, the particle size can better explain the variability of the scattering coefficient, while the mass-specific scattering coefficient is better explained by the apparent density. However, no similar results were found for the wet season. In addition, the spectral slopes of the backscattering coefficient correlated well with the PSD slope, and the bulk refractive index calculated from the backscattering ratio and PSD slope can indicate the particle composition of Poyang Lake. Overall, the knowledge on the PSD and IOPs gained in this study broadens our understanding of water optics in highly turbid water columns.

Functional Analysis in Long-Term Operation of High Power UV-LEDs in Continuous Fluoro-Sensing Systems for Hydrocarbon Pollution

This work analyzes the long-term functionality of HP (High-power) UV-LEDs (Ultraviolet Light Emitting Diodes) as the exciting light source in non-contact, continuous 24/7 real-time fluoro-sensing pollutant identification in inland water. Fluorescence is an effective alternative in the detection and identification of hydrocarbons. The HP UV-LEDs are more advantageous than classical light sources (xenon and mercury lamps) and helps in the development of a low cost, non-contact, and compact system for continuous real-time fieldwork. This work analyzes the wavelength, output optical power, and the effects of viscosity, temperature of the water pollutants, and the functional consistency for long-term HP UV-LED working operation. To accomplish the latter, an analysis of the influence of two types 365 nm HP UV-LEDs degradation under two continuous real-system working mode conditions was done, by temperature Accelerated Life Tests (ALTs). These tests estimate the mean life under continuous working conditions of 6200 h and for cycled working conditions (30 s ON & 30 s OFF) of 66,000 h, over 7 years of 24/7 operating life of hydrocarbon pollution monitoring. In addition, the durability in the face of the internal and external parameter system variations is evaluated.

Improved correction methods for field measurements of particulate light backscattering in turbid waters

Monte Carlo simulations are used to compute the uncertainty associated to light backscattering measurements in turbid waters using the ECO-BB (WET Labs) and Hydroscat (HOBI Labs) scattering sensors. ECO-BB measurements provide an accurate estimate of the particulate volume scattering coefficient after correction for absorption along the short instrument pathlength. For Hydroscat measurements, because of a longer photon pathlength, both absorption and scattering effects must be corrected for. As the standard (sigma) correction potentially leads to large errors, an improved correction method is developed then validated using field inherent and apparent optical measurements carried out in turbid estuarine waters. Conclusions are also drawn to guide development of future short pathlength backscattering sensors for turbid waters.