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Simonyan TR, Varfolomeeva LA, Mamontova AV, Kotlobay AA, Gorokhovatsky AY, Bogdanov AM, Boyko KM. Calcium Indicators with Fluorescence Lifetime-Based Signal Readout: A Structure-Function Study. Int J Mol Sci 2024; 25:12493. [PMID: 39684209 DOI: 10.3390/ijms252312493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2024] [Revised: 11/15/2024] [Accepted: 11/17/2024] [Indexed: 12/18/2024] Open
Abstract
The calcium cation is a crucial signaling molecule involved in numerous cellular pathways. Beyond its role as a messenger or modulator in intracellular cascades, calcium's function in excitable cells, including nerve impulse transmission, is remarkable. The central role of calcium in nervous activity has driven the rapid development of fluorescent techniques for monitoring this cation in living cells. Specifically, genetically encoded calcium indicators (GECIs) are the most in-demand molecular tools in their class. In this work, we address two issues of calcium imaging by designing indicators based on the successful GCaMP6 backbone and the fluorescent protein BrUSLEE. The first indicator variant (GCaMP6s-BrUS), with a reduced, calcium-insensitive fluorescence lifetime, has potential in monitoring calcium dynamics with a high temporal resolution in combination with advanced microscopy techniques, such as light beads microscopy, where the fluorescence lifetime limits acquisition speed. Conversely, the second variant (GCaMP6s-BrUS-145), with a flexible, calcium-sensitive fluorescence lifetime, is relevant for static measurements, particularly for determining absolute calcium concentration values using fluorescence lifetime imaging microscopy (FLIM). To identify the structural determinants of calcium sensitivity in these indicator variants, we determine their spatial structures. A comparative structural analysis allowed the optimization of the GCaMP6s-BrUS construct, resulting in an indicator variant combining calcium-sensitive behavior in the time domain and enhanced molecular brightness. Our data may serve as a starting point for further engineering efforts towards improved GECI variants with fine-tuned fluorescence lifetimes.
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Affiliation(s)
- Tatiana R Simonyan
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia
| | - Larisa A Varfolomeeva
- A.N. Bach Institute of Biochemistry, Research Centre of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia
| | | | - Alexey A Kotlobay
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia
| | | | - Alexey M Bogdanov
- Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Moscow 117997, Russia
- Department of Photonics, İzmir Institute of Technology, 35430 İzmir, Turkey
| | - Konstantin M Boyko
- A.N. Bach Institute of Biochemistry, Research Centre of Biotechnology of the Russian Academy of Sciences, Moscow 119071, Russia
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Ryu J, Kang U, Song JW, Kim J, Kim JW, Yoo H, Gweon B. Multimodal microscopy for the simultaneous visualization of five different imaging modalities using a single light source. BIOMEDICAL OPTICS EXPRESS 2021; 12:5452-5469. [PMID: 34692194 PMCID: PMC8515965 DOI: 10.1364/boe.430677] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 07/26/2021] [Accepted: 07/27/2021] [Indexed: 05/02/2023]
Abstract
Optical microscopy has been widely used in biomedical research as it provides photophysical and photochemical information of the target in subcellular spatial resolution without requiring physical contact with the specimen. To obtain a deeper understanding of biological phenomena, several efforts have been expended to combine such optical imaging modalities into a single microscope system. However, the use of multiple light sources and detectors through separated beam paths renders previous systems extremely complicated or slow for in vivo imaging. Herein, we propose a novel high-speed multimodal optical microscope system that simultaneously visualizes five different microscopic contrasts, i.e., two-photon excitation, second-harmonic generation, backscattered light, near-infrared fluorescence, and fluorescence lifetime, using a single femtosecond pulsed laser. Our proposed system can visualize five modal images with a frame rate of 3.7 fps in real-time, thereby providing complementary optical information that enhances both structural and functional contrasts. This highly photon-efficient multimodal microscope system enables various properties of biological tissues to be assessed.
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Affiliation(s)
- Jiheun Ryu
- Massachusetts General Hospital, Wellman Center for Photomedicine, 55 Fruit Street, Boston, MA 02114, USA
- Contributed equally
| | - Ungyo Kang
- Korea Advanced Institute of Science and Technology, Department of Mechanical Engineering, 291 Daehak-ro, Daejeon 34141, Republic of Korea
- Contributed equally
| | - Joon Woo Song
- Korea University Guro Hospital, Cardiovascular Center, 148 Gurodong-ro, Seoul 08308, Republic of Korea
| | - Junyoung Kim
- Massachusetts General Hospital, Wellman Center for Photomedicine, 55 Fruit Street, Boston, MA 02114, USA
- Korea Advanced Institute of Science and Technology, Department of Mechanical Engineering, 291 Daehak-ro, Daejeon 34141, Republic of Korea
| | - Jin Won Kim
- Korea University Guro Hospital, Cardiovascular Center, 148 Gurodong-ro, Seoul 08308, Republic of Korea
| | - Hongki Yoo
- Korea Advanced Institute of Science and Technology, Department of Mechanical Engineering, 291 Daehak-ro, Daejeon 34141, Republic of Korea
| | - Bomi Gweon
- Sejong University, Department of Mechanical Engineering, 209 Neungdong-ro, Seoul 05006, Republic of Korea
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Ryu J, Kang U, Kim J, Kim H, Kang JH, Kim H, Sohn DK, Jeong JH, Yoo H, Gweon B. Real-time visualization of two-photon fluorescence lifetime imaging microscopy using a wavelength-tunable femtosecond pulsed laser. BIOMEDICAL OPTICS EXPRESS 2018; 9:3449-3463. [PMID: 29984109 PMCID: PMC6033550 DOI: 10.1364/boe.9.003449] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2018] [Revised: 06/07/2018] [Accepted: 06/21/2018] [Indexed: 05/03/2023]
Abstract
A fluorescence lifetime imaging microscopy (FLIM) integrated with two-photon excitation technique was developed. A wavelength-tunable femtosecond pulsed laser with nominal pulse repetition rate of 76-MHz was used to acquire FLIM images with a high pixel rate of 3.91 MHz by processing the pulsed two-photon fluorescence signal. Analog mean-delay (AMD) method was adopted to accelerate the lifetime measurement process and to visualize lifetime map in real-time. As a result, rapid tomographic visualization of both structural and chemical properties of the tissues was possible with longer depth penetration and lower photo-damage compared to the conventional single-photon FLIM techniques.
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Affiliation(s)
- Jiheun Ryu
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, South Korea
- Wellman Center for Photomedicine, Harvard Medical School & Massachusetts General Hospital, Boston, Massachusetts 02114, USA
| | - Ungyo Kang
- Department of Biomedical Engineering, Hanyang University, Seoul 04763, South Korea
| | - Jayul Kim
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, South Korea
| | - Hyunjun Kim
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, South Korea
| | - Jue Hyung Kang
- Department of Biomedical Engineering, Hanyang University, Seoul 04763, South Korea
| | - Hyunjin Kim
- Molecular Imaging & Therapy Branch, Research Institute and Hospital, National Cancer Center, Goyang, 10408, South Korea
| | - Dae Kyung Sohn
- Innovative Medical Engineering & Technology, Division of Convergence Technology, Research Institute and Hospital, National Cancer Center, Goyang, 10408, South Korea
| | - Jae-Heon Jeong
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, Daejeon 34141, South Korea
| | - Hongki Yoo
- Department of Biomedical Engineering, Hanyang University, Seoul 04763, South Korea
| | - Bomi Gweon
- Department of Biomedical Engineering, Hanyang University, Seoul 04763, South Korea
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Nam HS, Kang WJ, Lee MW, Song JW, Kim JW, Oh WY, Yoo H. Multispectral analog-mean-delay fluorescence lifetime imaging combined with optical coherence tomography. BIOMEDICAL OPTICS EXPRESS 2018; 9:1930-1947. [PMID: 29675330 PMCID: PMC5905935 DOI: 10.1364/boe.9.001930] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/14/2017] [Revised: 03/15/2018] [Accepted: 03/18/2018] [Indexed: 05/19/2023]
Abstract
The pathophysiological progression of chronic diseases, including atherosclerosis and cancer, is closely related to compositional changes in biological tissues containing endogenous fluorophores such as collagen, elastin, and NADH, which exhibit strong autofluorescence under ultraviolet excitation. Fluorescence lifetime imaging (FLIm) provides robust detection of the compositional changes by measuring fluorescence lifetime, which is an inherent property of a fluorophore. In this paper, we present a dual-modality system combining a multispectral analog-mean-delay (AMD) FLIm and a high-speed swept-source optical coherence tomography (OCT) to simultaneously visualize the cross-sectional morphology and biochemical compositional information of a biological tissue. Experiments using standard fluorescent solutions showed that the fluorescence lifetime could be measured with a precision of less than 40 psec using the multispectral AMD-FLIm without averaging. In addition, we performed ex vivo imaging on rabbit iliac normal-looking and atherosclerotic specimens to demonstrate the feasibility of the combined FLIm-OCT system for atherosclerosis imaging. We expect that the combined FLIm-OCT will be a promising next-generation imaging technique for diagnosing atherosclerosis and cancer due to the advantages of the proposed label-free high-precision multispectral lifetime measurement.
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Affiliation(s)
- Hyeong Soo Nam
- Department of Biomedical Engineering, Hanyang University, 222 Wangsimni-ro, Seongdong-gu, Seoul 04673, South Korea
- Equally contributed to this study
| | - Woo Jae Kang
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, 291 Gwahang-no, Yuseong-gu, Daejeon 34141, South Korea
- Equally contributed to this study
| | - Min Woo Lee
- Department of Biomedical Engineering, Hanyang University, 222 Wangsimni-ro, Seongdong-gu, Seoul 04673, South Korea
| | - Joon Woo Song
- Cardiovascular Center, Korea University Guro Hospital, 148 Gurodong-ro, Guro-gu, Seoul 08308, South Korea
| | - Jin Won Kim
- Cardiovascular Center, Korea University Guro Hospital, 148 Gurodong-ro, Guro-gu, Seoul 08308, South Korea
| | - Wang-Yuhl Oh
- Department of Mechanical Engineering, Korea Advanced Institute of Science and Technology, 291 Gwahang-no, Yuseong-gu, Daejeon 34141, South Korea
| | - Hongki Yoo
- Department of Biomedical Engineering, Hanyang University, 222 Wangsimni-ro, Seongdong-gu, Seoul 04673, South Korea
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