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Wu Z, Moradi H, Yang S, Song H, Boctor EM, Salcudean SE. Automatic search for photoacoustic marker using automated transrectal ultrasound. BIOMEDICAL OPTICS EXPRESS 2023; 14:6016-6030. [PMID: 38021122 PMCID: PMC10659789 DOI: 10.1364/boe.501251] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/20/2023] [Revised: 10/18/2023] [Accepted: 10/18/2023] [Indexed: 12/01/2023]
Abstract
Real-time transrectal ultrasound (TRUS) image guidance during robot-assisted laparoscopic radical prostatectomy has the potential to enhance surgery outcomes. Whether conventional or photoacoustic TRUS is used, the robotic system and the TRUS must be registered to each other. Accurate registration can be performed using photoacoustic (PA markers). However, this requires a manual search by an assistant [IEEE Robot. Autom. Lett8, 1287 (2023).10.1109/LRA.2022.3191788]. This paper introduces the first automatic search for PA markers using a transrectal ultrasound robot. This effectively reduces the challenges associated with the da Vinci-TRUS registration. This paper investigated the performance of three search algorithms in simulation and experiment: Weighted Average (WA), Golden Section Search (GSS), and Ternary Search (TS). For validation, a surgical prostate scenario was mimicked and various ex vivo tissues were tested. As a result, the WA algorithm can achieve 0.53°±0.30° average error after 9 data acquisitions, while the TS and GSS algorithm can achieve 0.29 ∘ ± 0.31 ∘ and 0.48°±0.32° average errors after 28 data acquisitions.
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Affiliation(s)
- Zijian Wu
- Johns Hopkins University, Laboratory for Computational Sensing and Robotics, Baltimore, MD, USA
| | - Hamid Moradi
- University of British Columbia, Dept. of Electrical and Computer Engineering, Vancouver, BC, Canada
| | - Shuojue Yang
- University of Texas at Austin, Walker Department of Mechanical Engineering, Austin, TX, USA
| | - Hyunwoo Song
- Johns Hopkins University, Laboratory for Computational Sensing and Robotics, Baltimore, MD, USA
- Johns Hopkins University, Dept. of Computer Science, Baltimore, MD, USA
| | - Emad M Boctor
- Johns Hopkins University, Laboratory for Computational Sensing and Robotics, Baltimore, MD, USA
- Johns Hopkins University, Dept. of Computer Science, Baltimore, MD, USA
| | - Septimiu E Salcudean
- University of British Columbia, Dept. of Electrical and Computer Engineering, Vancouver, BC, Canada
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Gao S, Wang Y, Ma X, Zhou H, Jiang Y, Yang K, Lu L, Wang S, Nephew BC, Fichera L, Fischer GS, Zhang HK. Intraoperative laparoscopic photoacoustic image guidance system in the da Vinci surgical system. BIOMEDICAL OPTICS EXPRESS 2023; 14:4914-4928. [PMID: 37791285 PMCID: PMC10545189 DOI: 10.1364/boe.498052] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2023] [Revised: 07/23/2023] [Accepted: 07/31/2023] [Indexed: 10/05/2023]
Abstract
This paper describes a framework allowing intraoperative photoacoustic (PA) imaging integrated into minimally invasive surgical systems. PA is an emerging imaging modality that combines the high penetration of ultrasound (US) imaging with high optical contrast. With PA imaging, a surgical robot can provide intraoperative neurovascular guidance to the operating physician, alerting them of the presence of vital substrate anatomy invisible to the naked eye, preventing complications such as hemorrhage and paralysis. Our proposed framework is designed to work with the da Vinci surgical system: real-time PA images produced by the framework are superimposed on the endoscopic video feed with an augmented reality overlay, thus enabling intuitive three-dimensional localization of critical anatomy. To evaluate the accuracy of the proposed framework, we first conducted experimental studies in a phantom with known geometry, which revealed a volumetric reconstruction error of 1.20 ± 0.71 mm. We also conducted an ex vivo study by embedding blood-filled tubes into chicken breast, demonstrating the successful real-time PA-augmented vessel visualization onto the endoscopic view. These results suggest that the proposed framework could provide anatomical and functional feedback to surgeons and it has the potential to be incorporated into robot-assisted minimally invasive surgical procedures.
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Affiliation(s)
- Shang Gao
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Yang Wang
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Xihan Ma
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Haoying Zhou
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Yiwei Jiang
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Kehan Yang
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Liang Lu
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Computer Science, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Shiyue Wang
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Computer Science, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Benjamin C. Nephew
- Department of Biology & Biotechnology, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Neuroscience Program, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Loris Fichera
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Gregory S. Fischer
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Mechanical & Materials Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Biomedical Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Electrical & Computer Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
| | - Haichong K. Zhang
- Department of Robotics Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Computer Science, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
- Department of Biomedical Engineering, Worcester Polytechnic Institute, 100 Institute Rd, Worcester, MA 01609, USA
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Gao R, Xue Q, Ren Y, Zhang H, Song L, Liu C. Achieving depth-independent lateral resolution in AR-PAM using the synthetic-aperture focusing technique. PHOTOACOUSTICS 2022; 26:100328. [PMID: 35242539 PMCID: PMC8861412 DOI: 10.1016/j.pacs.2021.100328] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 12/12/2021] [Accepted: 12/23/2021] [Indexed: 05/02/2023]
Abstract
Acoustic-resolution photoacoustic microscopy (AR-PAM) is a promising imaging modality that renders images with ultrasound resolution and extends the imaging depth beyond the optical ballistic regime. To achieve a high lateral resolution, a large numerical aperture (NA) of a focused transducer is usually applied for AR-PAM. However, AR-PAM fails to hold its performance in the out-of-focus region. The lateral resolution and signal-to-noise ratio (SNR) degrade substantially, thereby leading to a significantly deteriorated image quality outside the focal area. Based on the concept of the synthetic-aperture focusing technique (SAFT), various strategies have been developed to address this challenge. These include 1D-SAFT, 2D-SAFT, adaptive-SAFT, spatial impulse response (SIR)-based schemes, and delay-multiply-and-sum (DMAS) strategies. These techniques have shown progress in achieving depth-independent lateral resolution, while several challenges remain. This review aims to introduce these developments in SAFT-based approaches, highlight their fundamental mechanisms, underline the advantages and limitations of each approach, and discuss the outlook of the remaining challenges for future advances.
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Affiliation(s)
- Rongkang Gao
- Research Laboratory for Biomedical Optics and Molecular Imaging, CAS Key Laboratory of Health Informatics, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Qiang Xue
- Research Laboratory for Biomedical Optics and Molecular Imaging, CAS Key Laboratory of Health Informatics, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- School of Medicine, Southern University of Science and Technology, Shenzhen 518055, China
- Department of Ultrasound, First Affiliated Hospital of Southern University of Science and Technology, The Shenzhen Medical Ultrasound Engineering Center, Shenzhen People's Hospital, Shenzhen 518020, China
| | - Yaguang Ren
- Research Laboratory for Biomedical Optics and Molecular Imaging, CAS Key Laboratory of Health Informatics, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Hai Zhang
- Department of Ultrasound, First Affiliated Hospital of Southern University of Science and Technology, The Shenzhen Medical Ultrasound Engineering Center, Shenzhen People's Hospital, Shenzhen 518020, China
- Department of Ultrasound, The Second Clinical College of Jinan University, Shenzhen People's Hospital, Shenzhen 518020, China
| | - Liang Song
- Research Laboratory for Biomedical Optics and Molecular Imaging, CAS Key Laboratory of Health Informatics, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
| | - Chengbo Liu
- Research Laboratory for Biomedical Optics and Molecular Imaging, CAS Key Laboratory of Health Informatics, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China
- Corresponding author.
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Gao S, Tsumura R, Vang DP, Bisland K, Xu K, Tsunoi Y, Zhang HK. Acoustic-resolution photoacoustic microscope based on compact and low-cost delta configuration actuator. ULTRASONICS 2022; 118:106549. [PMID: 34474357 PMCID: PMC8530928 DOI: 10.1016/j.ultras.2021.106549] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/27/2021] [Revised: 08/02/2021] [Accepted: 08/04/2021] [Indexed: 05/02/2023]
Abstract
The state-of-the-art configurations for acoustic-resolution photoacoustic (PA) microscope (AR-PAM) are large in size and expensive, hindering their democratization. While previous research on AR-PAMs introduced a low-cost light source to reduce the cost, few studies have investigated the possibility of optimizing the sensor actuation, particularly for the AR-PAM. Additionally, there is an unmet need to evaluate the image quality deterioration associated with the actuation inaccuracy. A low-cost actuation device is introduced to reduce the system size and cost of the AR-PAM while maintaining the image quality by implementing the advanced beamformers. This work proposes an AR-RAM incorporating the delta configuration actuator adaptable from a low-cost off-the-shelf 3D printer as the sensor actuation device. The image degradation due to the data acquisition positioning inaccuracy is evaluated in the simulation. We further assess the mitigation of potential actuation precision uncertainty through advanced 3D synthetic aperture focusing algorithms represented by the Delay-and-Sum (DAS) with Coherence Factor (DAS+CF) and Delay-Multiply-and-Sum (DMAS) algorithms. The simulation study demonstrated the tolerance of image quality on actuation inaccuracy and the effect of compensating the actuator motion precision error through advanced reconstruction algorithms. With those algorithms, the image quality degradation was suppressed to within 25% with the presence of 0.2 mm motion inaccuracy. The experimental evaluation using phantoms and an ex-vivo sample presented the applicability of low-cost delta configuration actuators for AR-PAMs. The measured full width at half maximum of the 0.2 mm diameter pencil-lead phantom were 0.45 ± 0.06 mm, 0.31 ± 0.04 mm, and 0.35 ± 0.07 mm, by applying the DAS, DAS+CF, and DMAS algorithms, respectively. AR-PAMs with a compact and low-cost delta configuration provide high-quality PA imaging with better accessibility for biomedical applications. The research evaluated the image degradation contributed by the actuation inaccuracy and suggested that the advanced beamformers are capable of suppressing the actuation inaccuracy.
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Affiliation(s)
- Shang Gao
- Worcester Polytechnic Institute, Department of Robotics Engineering, 100 Institute Rd, Worcester 01609, United States
| | - Ryosuke Tsumura
- Worcester Polytechnic Institute, Department of Robotics Engineering, 100 Institute Rd, Worcester 01609, United States; Worcester Polytechnic Institute, Department of Biomedical Engineering, 100 Institute Rd, Worcester 01609, United States
| | - Doua P Vang
- Worcester Polytechnic Institute, Department of Electrical and Computer Engineering, 100 Institute Rd, Worcester 01609, United States
| | - Keion Bisland
- Worcester Polytechnic Institute, Department of Robotics Engineering, 100 Institute Rd, Worcester 01609, United States
| | - Keshuai Xu
- Johns Hopkins University, Department of Computer Science, Baltimore 21218, United States
| | - Yasuyuki Tsunoi
- National Defense Medical College Research Institute, Division of Bioinformation and Therapeutic Systems, 3-2 Namiki, Tokorozawa 359-8513, Japan
| | - Haichong K Zhang
- Worcester Polytechnic Institute, Department of Robotics Engineering, 100 Institute Rd, Worcester 01609, United States; Worcester Polytechnic Institute, Department of Biomedical Engineering, 100 Institute Rd, Worcester 01609, United States; Worcester Polytechnic Institute, Department of Computer Science, 100 Institute Rd, Worcester 01609, United States.
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Gonzalez EA, Bell MAL. GPU implementation of photoacoustic short-lag spatial coherence imaging for improved image-guided interventions. JOURNAL OF BIOMEDICAL OPTICS 2020; 25:1-19. [PMID: 32713168 PMCID: PMC7381831 DOI: 10.1117/1.jbo.25.7.077002] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 06/29/2020] [Indexed: 05/04/2023]
Abstract
SIGNIFICANCE Photoacoustic-based visual servoing is a promising technique for surgical tool tip tracking and automated visualization of photoacoustic targets during interventional procedures. However, one outstanding challenge has been the reliability of obtaining segmentations using low-energy light sources that operate within existing laser safety limits. AIM We developed the first known graphical processing unit (GPU)-based real-time implementation of short-lag spatial coherence (SLSC) beamforming for photoacoustic imaging and applied this real-time algorithm to improve signal segmentation during photoacoustic-based visual servoing with low-energy lasers. APPROACH A 1-mm-core-diameter optical fiber was inserted into ex vivo bovine tissue. Photoacoustic-based visual servoing was implemented as the fiber was manually displaced by a translation stage, which provided ground truth measurements of the fiber displacement. GPU-SLSC results were compared with a central processing unit (CPU)-SLSC approach and an amplitude-based delay-and-sum (DAS) beamforming approach. Performance was additionally evaluated with in vivo cardiac data. RESULTS The GPU-SLSC implementation achieved frame rates up to 41.2 Hz, representing a factor of 348 speedup when compared with offline CPU-SLSC. In addition, GPU-SLSC successfully recovered low-energy signals (i.e., ≤268 μJ) with mean ± standard deviation of signal-to-noise ratios of 11.2 ± 2.4 (compared with 3.5 ± 0.8 with conventional DAS beamforming). When energies were lower than the safety limit for skin (i.e., 394.6 μJ for 900-nm wavelength laser light), the median and interquartile range (IQR) of visual servoing tracking errors obtained with GPU-SLSC were 0.64 and 0.52 mm, respectively (which were lower than the median and IQR obtained with DAS by 1.39 and 8.45 mm, respectively). GPU-SLSC additionally reduced the percentage of failed segmentations when applied to in vivo cardiac data. CONCLUSIONS Results are promising for the use of low-energy, miniaturized lasers to perform GPU-SLSC photoacoustic-based visual servoing in the operating room with laser pulse repetition frequencies as high as 41.2 Hz.
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Affiliation(s)
- Eduardo A. Gonzalez
- Johns Hopkins University, School of Medicine, Department of Biomedical Engineering, Baltimore, Maryland, United States
| | - Muyinatu A. Lediju Bell
- Johns Hopkins University, School of Medicine, Department of Biomedical Engineering, Baltimore, Maryland, United States
- Johns Hopkins University, Whiting School of Engineering, Department of Electrical and Computer Engineering, Baltimore, Maryland, United States
- Johns Hopkins University, Whiting School of Engineering, Department of Computer Science, Baltimore, Maryland, United States
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Wu Y, Zhang HK, Kang J, Boctor EM. An economic photoacoustic imaging platform using automatic laser synchronization and inverse beamforming. ULTRASONICS 2020; 103:106098. [PMID: 32105781 PMCID: PMC7418056 DOI: 10.1016/j.ultras.2020.106098] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2019] [Revised: 10/28/2019] [Accepted: 01/20/2020] [Indexed: 05/02/2023]
Abstract
We present a proof-of-concept of an automatic integration of photoacoustic (PA) imaging on clinical ultrasound (US) imaging platforms. Here we tackle two critical challenges: the laser synchronization and the inaccessibility to the beamformer core embedded in commercial US imaging platform. In particular, the line trigger frequency (LTF) estimation and the asynchronous synthetic aperture inverse beamforming (ASAIB) were developed and evaluated in both k-Wave simulation and phantom experiment. The proposed method is an economical solution to enable PA imaging on a greater number of US equipment to further thrive the PA imaging research community.
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Affiliation(s)
- Yixuan Wu
- Department of Computer Science, The Johns Hopkins University, Baltimore, MD 21218, USA
| | - Haichong K Zhang
- Department of Computer Science, The Johns Hopkins University, Baltimore, MD 21218, USA
| | - Jeeun Kang
- Department of Computer Science, The Johns Hopkins University, Baltimore, MD 21218, USA; Russell H, Morgan Department of Radiology and Radiological Science, The Johns Hopkins University, Baltimore, MD 21218, USA.
| | - Emad M Boctor
- Department of Computer Science, The Johns Hopkins University, Baltimore, MD 21218, USA; Russell H, Morgan Department of Radiology and Radiological Science, The Johns Hopkins University, Baltimore, MD 21218, USA; Department of Electrical and Computer Engineering, The Johns Hopkins University, Baltimore, MD 21218, USA.
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Mozaffarzadeh M, Periyasamy V, Pramanik M, Makkiabadi B. Efficient nonlinear beamformer based on P'th root of detected signals for linear-array photoacoustic tomography: application to sentinel lymph node imaging. JOURNAL OF BIOMEDICAL OPTICS 2018; 23:1-12. [PMID: 30054995 PMCID: PMC8357197 DOI: 10.1117/1.jbo.23.12.121604] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2018] [Accepted: 06/13/2018] [Indexed: 05/18/2023]
Abstract
In linear-array transducer-based photoacoustic (PA) imaging, B-scan PA images are formed using the raw channel PA signals. Delay-and-sum (DAS) is the most prevalent algorithm due to its simple implementation, but it leads to low-quality images. Delay-multiply-and-sum (DMAS) provides a higher image quality in comparison with DAS while it imposes a computational burden of O ( M2 ) . We introduce a nonlinear (NL) beamformer for linear-array PA imaging, which uses the p'th root of the detected signals and imposes the complexity of DAS [O ( M ) ]. The proposed algorithm is evaluated numerically and experimentally [wire-target and in-vivo sentinel lymph node (SLN) imaging], and the effects of the parameter p are investigated. The results show that the NL algorithm, using a root of p (NL_p), leads to lower sidelobes and higher signal-to-noise ratio compared with DAS and DMAS, for (p > 2). The sidelobes level (for the wire-target phantom), at the depth of 11.4 mm, are about -31, -52, -52, -67, -88, and -109 dB, for DAS, DMAS, NL_2, NL_3, NL_4, and NL_5, respectively, indicating the superiority of the NL_p algorithm. In addition, the best value of p for SLN imaging is reported to be 12.
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Affiliation(s)
- Moein Mozaffarzadeh
- Institute for Advanced Medical Technologies (IAMT), Research Center for Biomedical Technologies and Robotics (RCBTR), Tehran, Iran
- Tarbiat Modares University, Department of Biomedical Engineering, Tehran, Iran
| | - Vijitha Periyasamy
- Nanyang Technological University, School of Chemical and Biomedical Engineering, Singapore
| | - Manojit Pramanik
- Nanyang Technological University, School of Chemical and Biomedical Engineering, Singapore
- Address all correspondence to: Manojit Pramanik, E-mail: ; Bahador Makkiabadi, E-mail:
| | - Bahador Makkiabadi
- Institute for Advanced Medical Technologies (IAMT), Research Center for Biomedical Technologies and Robotics (RCBTR), Tehran, Iran
- Tehran University of Medical Sciences, School of Medicine, Department of Medical Physics and Biomedical Engineering, Tehran, Iran
- Address all correspondence to: Manojit Pramanik, E-mail: ; Bahador Makkiabadi, E-mail:
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Mozaffarzadeh M, Yan Y, Mehrmohammadi M, Makkiabadi B. Enhanced linear-array photoacoustic beamforming using modified coherence factor. JOURNAL OF BIOMEDICAL OPTICS 2018; 23:1-10. [PMID: 29446261 DOI: 10.1117/1.jbo.23.2.026005] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/28/2017] [Accepted: 01/25/2018] [Indexed: 05/08/2023]
Abstract
Photoacoustic imaging (PAI) is a promising medical imaging modality providing the spatial resolution of ultrasound imaging and the contrast of optical imaging. For linear-array PAI, a beamformer can be used as the reconstruction algorithm. Delay-and-sum (DAS) is the most prevalent beamforming algorithm in PAI. However, using DAS beamformer leads to low-resolution images as well as high sidelobes due to nondesired contribution of off-axis signals. Coherence factor (CF) is a weighting method in which each pixel of the reconstructed image is weighted, based on the spatial spectrum of the aperture, to mainly improve the contrast. We demonstrate that the numerator of the formula of CF contains a DAS algebra and propose the use of a delay-multiply-and-sum beamformer instead of the available DAS on the numerator. The proposed weighting technique, modified CF (MCF), has been evaluated numerically and experimentally compared to CF. It was shown that MCF leads to lower sidelobes and better detectable targets. The quantitative results of the experiment (using wire targets) show that MCF leads to for about 45% and 40% improvement, in comparison with CF, in the terms of signal-to-noise ratio and full-width-half-maximum, respectively.
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Affiliation(s)
- Moein Mozaffarzadeh
- Research Center for Biomedical Technologies and Robotics, Institute for Advanced Medical Technologie, Iran
- Tarbiat Modares University, Department of Biomedical Engineering, Tehran, Iran
| | - Yan Yan
- Wayne State University, Department of Biomedical Engineering, Detroit, Michigan, United States
| | - Mohammad Mehrmohammadi
- Wayne State University, Department of Biomedical Engineering, Detroit, Michigan, United States
| | - Bahador Makkiabadi
- Research Center for Biomedical Technologies and Robotics, Institute for Advanced Medical Technologie, Iran
- Tehran University of Medical Sciences, Department of Medical Physics and Biomedical Engineering, Sch, Iran
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Moradi H, Tang S, Salcudean SE. Deconvolution based photoacoustic reconstruction with sparsity regularization. OPTICS EXPRESS 2017. [PMID: 29518995 DOI: 10.1364/oe.25.002771] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
In most photoacoustic tomography (PAT) reconstruction approaches, it is assumed that the receiving transducers have omnidirectional response and can fully surround the region of interest. These assumptions are not satisfied in practice. To deal with these limitations, we present a novel deconvolution based photoacoustic reconstruction with sparsity regularization (DPARS) technique. The DPARS algorithm is a semi-analytical reconstruction approach in which the projections of the absorber distribution derived from a deconvolution-based method are computed and used to generate a large linear system of equations. In these projections, computed over limited viewing angles, the directivity effect of the transducer is taken into account. The distribution of absorbers is computed using a sparse representation of absorber coefficients obtained from the discrete cosine transform. This sparse representation helps improve the numerical conditioning of the system of equations and reduces the computation time of the deconvolution-based approach by one order of magnitude relative to Tikhonov regularization. The algorithm has been tested in simulations, and using two-dimensional and three-dimensional experimental data obtained with a conventional ultrasound transducer. The results show that DPARS, when evaluated using contrast-to-noise ratio and root-mean-square errors, outperforms the conventional delay-and-sum (DAS) reconstruction method.
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