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Abbasian V, Darafsheh A, Moradi AR. Simple high-resolution 3D microscopy by a dielectric microsphere: a proof of concept. OPTICS LETTERS 2023; 48:6216-6219. [PMID: 38039230 DOI: 10.1364/ol.502599] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Accepted: 11/09/2023] [Indexed: 12/03/2023]
Abstract
We present a simple high-resolution approach for 3D and quantitative phase imaging (QPI). Our method makes the most of a glass microsphere (MS) for microscopy and a glass plate for lateral shearing self-referencing interferometry. The single MS serves all the functions of a microscope objective (MO) in digital holographic microscopy (DHM) while offering the advantages of compactness, lightness, and affordability. A proof-of-concept experiment is performed on a standard diffraction grating, and various effective parameters on the imaging performance are investigated. The results are validated by atomic force microscopy and Mirau-DHM, and 3D morphometric information of the sample under inspection is obtained. The technique is then applied for 3D quantitative measurement and visualization of a human red blood cell, proving the principle of our easy-to-implement and vibration-immune arrangement for high-contrast label-free QPI of biological samples, and its utility in cell morphology, identification, and classification.
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2
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Idicula MS, Kozacki T, Józwik M, Mitura P, Martinez-Carranza J, Choo HG. Multi-Incidence Holographic Profilometry for Large Gradient Surfaces with Sub-Micron Focusing Accuracy. SENSORS (BASEL, SWITZERLAND) 2021; 22:214. [PMID: 35009757 PMCID: PMC8749622 DOI: 10.3390/s22010214] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 12/23/2021] [Accepted: 12/26/2021] [Indexed: 06/14/2023]
Abstract
Surface reconstruction for micro-samples with large discontinuities using digital holography is a challenge. To overcome this problem, multi-incidence digital holographic profilometry (MIDHP) has been proposed. MIDHP relies on the numerical generation of the longitudinal scanning function (LSF) for reconstructing the topography of the sample with large depth and high axial resolution. Nevertheless, the method is unable to reconstruct surfaces with large gradients due to the need of: (i) high precision focusing that manual adjustment cannot fulfill and (ii) preserving the functionality of the LSF that requires capturing and processing many digital holograms. In this work, we propose a novel MIDHP method to solve these limitations. First, an autofocusing algorithm based on the comparison of shapes obtained by the LSF and the thin tilted element approximation is proposed. It is proven that this autofocusing algorithm is capable to deliver in-focus plane localization with submicron resolution. Second, we propose that wavefield summation for the generation of the LSF is carried out in Fourier space. It is shown that this scheme enables a significant reduction of arithmetic operations and can minimize the number of Fourier transforms needed. Hence, a fast generation of the LSF is possible without compromising its accuracy. The functionality of MIDHP for measuring surfaces with large gradients is supported by numerical and experimental results.
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Affiliation(s)
- Moncy Sajeev Idicula
- Faculty of Mechatronics, Warsaw University of Technology, 8 Sw. A. Boboli Street, 02-525 Warsaw, Poland; (M.S.I.); (M.J.); (P.M.); (J.M.-C.)
| | - Tomasz Kozacki
- Faculty of Mechatronics, Warsaw University of Technology, 8 Sw. A. Boboli Street, 02-525 Warsaw, Poland; (M.S.I.); (M.J.); (P.M.); (J.M.-C.)
| | - Michal Józwik
- Faculty of Mechatronics, Warsaw University of Technology, 8 Sw. A. Boboli Street, 02-525 Warsaw, Poland; (M.S.I.); (M.J.); (P.M.); (J.M.-C.)
| | - Patryk Mitura
- Faculty of Mechatronics, Warsaw University of Technology, 8 Sw. A. Boboli Street, 02-525 Warsaw, Poland; (M.S.I.); (M.J.); (P.M.); (J.M.-C.)
| | - Juan Martinez-Carranza
- Faculty of Mechatronics, Warsaw University of Technology, 8 Sw. A. Boboli Street, 02-525 Warsaw, Poland; (M.S.I.); (M.J.); (P.M.); (J.M.-C.)
| | - Hyon-Gon Choo
- Media Research Department, Electronics and Telecommunications Research Institute, 218 Gajeong-ro, Yuseong-gu, Daejeon 34129, Korea;
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3
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Turko NA, Shaked NT. Erythrocyte volumetric measurements in imaging flow cytometry using simultaneous three-wavelength digital holographic microscopy. BIOMEDICAL OPTICS EXPRESS 2020; 11:6649-6658. [PMID: 33282514 PMCID: PMC7687930 DOI: 10.1364/boe.404368] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Revised: 09/30/2020] [Accepted: 09/30/2020] [Indexed: 05/30/2023]
Abstract
We report a cross-talk free simultaneous three-wavelength digital holographic microscopy setup for spectroscopic imaging of biological cells during flow. The feasibility of the proposed measurement technique is demonstrated on erythrocytes, due to their unique morphology and dependency of hemoglobin (Hb) molecule absorption on wavelength. From the spectroscopic quantitative phase profiles of cells acquired during flow in a microfluidic device, we decoupled the refractive index and the physical thickness. We then used our quantitative phase imaging results to dynamically calculate the mean cell volume (MCV), mean corpuscular Hb concentration (MCHC), mean corpuscular Hb content (MCH) and sphericity index.
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4
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Kumar M, Quan X, Awatsuji Y, Tamada Y, Matoba O. Single-shot common-path off-axis dual-wavelength digital holographic microscopy. APPLIED OPTICS 2020; 59:7144-7152. [PMID: 32902476 DOI: 10.1364/ao.395001] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Accepted: 07/06/2020] [Indexed: 06/11/2023]
Abstract
A single-shot common-path off-axis self-interference dual-wavelength digital holographic microscopic (DHM) system based on a cube beam splitter is demonstrated to expand the phase range in a stepped microstructure and for simultaneous measurement of the refractive index and physical thickness of a specimen. In the system, two laser beams with wavelengths of 532 nm and 632.8 nm are used. These laser beams are combined to transilluminate the object under study, then the object beam is divided into two beams by using a beam splitter oriented in such a way that both the beams propagate in almost the same direction, with an appropriate lateral separation between them. One of the object beams is spatially filtered at its Fourier plane, using a pinhole to generate a reference spherical beam free from the object information. The reference beam interferes with the object beam to form a digital hologram at the faceplate of the image sensor. The phase information is extracted from a single recorded digital hologram using the phase aberration compensation method that is based on principal component analysis (PCA). Owing to the common-path configuration, the system shows high temporal phase stability and it is less vibration-sensitive compared to counterparts such as a Mach-Zehnder type DHM. The performance of the dual-wavelength DHM system is verified in two different application fields by conducting the experiments using microsphere beads and living plant cells.
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5
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Martinez-Carranza J, Mikuła-Zdańkowska M, Ziemczonok M, Kozacki T. Multi-incidence digital holographic profilometry with high axial resolution and enlarged measurement range. OPTICS EXPRESS 2020; 28:8185-8199. [PMID: 32225448 DOI: 10.1364/oe.385743] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2019] [Accepted: 02/05/2020] [Indexed: 06/10/2023]
Abstract
In this work, multi-incident digital holographic profilometry for microscale measurements is presented. This technique assembles the set of object fields from captured holograms for generation of the longitudinal scanning function (LSF). Numerical propagation is used for refocusing, and thus, the LSF can be determined at any given plane along the optical axis. The LSF takes maximum value for in focus object points, which are used to obtain full-field height distribution of the sample. This principle is the base of proposed measurement technique. Three capturing holograms strategies, which give control over the shape of the LSF, unambiguous measurement range, axial resolution, and noise immunity, are discussed. The conclusions of this work are supported by numerical and experimental results.
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6
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Picazo-Bueno JA, Trusiak M, Micó V. Single-shot slightly off-axis digital holographic microscopy with add-on module based on beamsplitter cube. OPTICS EXPRESS 2019; 27:5655-5669. [PMID: 30876163 DOI: 10.1364/oe.27.005655] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Accepted: 12/17/2018] [Indexed: 05/21/2023]
Abstract
Slightly off-axis digital holographic microscopy (SO-DHM) has recently emerged as a novel experimental arrangement for quantitative phase imaging (QPI). It offers improved capabilities in conventional on-axis and off-axis interferometric configurations. In this contribution, we report on a single-shot SO-DHM approach based on an add-on module adapted to the exit port of a regular microscope. The module employs a beamsplitter (BS) cube interferometer and includes, in addition, a Stokes lens (SL) for astigmatism compensation. Each recorded frame contains two fields of view (FOVs) of the sample, where each FOV is a hologram which is phase shifted by π rads with respect to the other. These two simultaneously recorded holograms are numerically processed, in order to retrieve complex amplitude distribution with enhanced quality. The tradeoff is done in the FOV which becomes penalized as a consequence of the simultaneous recording of the two holograms in a single snapshot. Experimental validation is presented for a wide variety of samples using a regular Olympus BX-60 upright microscope. The proposed approach provides an optimized use of the imaging system, in terms of the space-bandwidth product, in comparison with off-axis configuration; allows the analysis of fast-dynamic events, owing to its single-shot capability when compared with on-axis arrangement; and becomes easily implementable in conventional white-light microscopes for upgrading them into holographic microscopes for QPI.
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7
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Online 3D Displacement Measurement Using Speckle Interferometer with a Single Illumination-Detection Path. SENSORS 2018; 18:s18061923. [PMID: 29899279 PMCID: PMC6022172 DOI: 10.3390/s18061923] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/15/2018] [Revised: 06/09/2018] [Accepted: 06/11/2018] [Indexed: 11/21/2022]
Abstract
Measurement systems for online nondestructive full-field three-dimensional (3D) displacement based on the single-shot and multiplexing techniques attract more and more interest, especially throughout the manufacturing industries. This paper proposes an accurate and easy-to-implement method based on an electronic speckle pattern interferometer (ESPI) with single illumination-detection path to realize the online nondestructive full-field 3D displacement measurement. The simple and compact optical system generates three different sensitivity vectors to enable the evaluation of the three orthogonal displacement components. By applying the spatial carrier phase-shifting technique, the desired information can be obtained in real time. The theoretical analysis and the measurement results have proven the feasibility of this ESPI system and quantified its relative measurement error.
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8
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Rivenson Y, Zhang Y, Günaydın H, Teng D, Ozcan A. Phase recovery and holographic image reconstruction using deep learning in neural networks. LIGHT, SCIENCE & APPLICATIONS 2018; 7:17141. [PMID: 30839514 PMCID: PMC6060068 DOI: 10.1038/lsa.2017.141] [Citation(s) in RCA: 267] [Impact Index Per Article: 44.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/21/2017] [Revised: 10/05/2017] [Accepted: 10/11/2017] [Indexed: 05/03/2023]
Abstract
Phase recovery from intensity-only measurements forms the heart of coherent imaging techniques and holography. In this study, we demonstrate that a neural network can learn to perform phase recovery and holographic image reconstruction after appropriate training. This deep learning-based approach provides an entirely new framework to conduct holographic imaging by rapidly eliminating twin-image and self-interference-related spatial artifacts. This neural network-based method is fast to compute and reconstructs phase and amplitude images of the objects using only one hologram, requiring fewer measurements in addition to being computationally faster. We validated this method by reconstructing the phase and amplitude images of various samples, including blood and Pap smears and tissue sections. These results highlight that challenging problems in imaging science can be overcome through machine learning, providing new avenues to design powerful computational imaging systems.
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Affiliation(s)
- Yair Rivenson
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095, USA
- Bioengineering Department, University of California, Los Angeles, CA 90095, USA
- California NanoSystems Institute (CNSI), University of California, Los Angeles, CA 90095, USA
| | - Yibo Zhang
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095, USA
- Bioengineering Department, University of California, Los Angeles, CA 90095, USA
- California NanoSystems Institute (CNSI), University of California, Los Angeles, CA 90095, USA
| | - Harun Günaydın
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095, USA
| | - Da Teng
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095, USA
- Computer Science Department, University of California, Los Angeles, CA 90095, USA
| | - Aydogan Ozcan
- Electrical and Computer Engineering Department, University of California, Los Angeles, CA 90095, USA
- Bioengineering Department, University of California, Los Angeles, CA 90095, USA
- California NanoSystems Institute (CNSI), University of California, Los Angeles, CA 90095, USA
- Department of Surgery, David Geffen School of Medicine, University of California, Los Angeles, CA 90095, USA
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9
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Hincapie D, Velasquez D, Garcia-Sucerquia J. Chromatic aberration compensation in numerical reconstruction of digital holograms by Fresnel-Bluestein propagation. OPTICS LETTERS 2017; 42:5294-5297. [PMID: 29240196 DOI: 10.1364/ol.42.005294] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Accepted: 11/17/2017] [Indexed: 06/07/2023]
Abstract
In this Letter, we present a method for chromatic compensation in numerical reconstruction of digitally recorded holograms based on Fresnel-Bluestein propagation. The proposed technique is applied to correct the chromatic aberration that arises in the reconstruction of RGB holograms of both millimeter- and micrometer-sized objects. The results show the feasibility of this strategy to remove the wavelength dependence of the size of the numerically propagated wavefields.
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10
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Liu L, Shan M, Zhong Z, Liu B, Luan G, Diao M, Zhang Y. Simultaneous dual-wavelength off-axis flipping digital holography. OPTICS LETTERS 2017; 42:4331-4334. [PMID: 29088156 DOI: 10.1364/ol.42.004331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/24/2017] [Accepted: 09/24/2017] [Indexed: 06/07/2023]
Abstract
We develop a two-wavelength off-axis digital holography for quantitative phase imaging using flipping in a single interferogram shot. The interference is performed by flipping the relative position of a sample and reference beam, and the two-wavelength information is spatially multiplexed onto a monochromatic charge-coupled device camera simultaneously using polarization modulation. Due to the interferogram containing two-wavelength information with orthogonal interference fringes, the two-wavelength unwrapped information on the phase and thickness for the sample is extracted from a single shot. Our setup requires no pinholes, gratings, or dichroic mirrors with straightforward alignment. We demonstrate the operation of the setup with a step target and circular pillar.
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11
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Tayebi B, Han JH, Sharif F, Jafarfard MR, Kim DY. Compact single-shot four-wavelength quantitative phase microscopy with polarization- and frequency-division demultiplexing. OPTICS EXPRESS 2017; 25:20172-20182. [PMID: 29041701 DOI: 10.1364/oe.25.020172] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Accepted: 07/27/2017] [Indexed: 06/07/2023]
Abstract
We present a novel single-shot four-wavelength quantitative phase microscopy (FW-QPM). Four lasers operating at different wavelengths are multiplexed with a pair of dichroic mirrors and a polarization beam splitter in a three-mirror quasi-common-path interferometer. After a single-shot interference pattern is obtained with a monochrome camera, four holograms of different wavelengths were demultiplexed from it in the frequency domain with polarization- and frequency-division multiplexing. Polarization-division demultiplexing scheme uses polarization dependent visibility changes in an interference pattern, and it plays a critical role in making only two interference patterns exist within a single quadrant in the frequency domain. We have used a single-mode optical fiber as a phase object sample and demonstrated that a measured single-shot interference pattern can be successfully demultiplexed into four different interferograms of different wavelengths with our proposed scheme.
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12
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Li J, Lu X, Xu X, Yin Z, Shou J, Huang L, Cai H, Zheng D, Zhong L. Simultaneous phase-shifting dual-wavelength interferometry based on independent component analysis. APPLIED OPTICS 2017; 56:3673-3678. [PMID: 28463251 DOI: 10.1364/ao.56.003673] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
An independent component analysis-based simultaneous phase-shifting dual-wavelength interferometry approach is proposed. By using a one-time phase-shifting procedure, the simultaneous phase-shifting operation of two illumination wavelengths can be implemented, and then the background intensity and two orthogonal independent components of each single wavelength can be separated from a sequence of simultaneous phase-shifting dual-wavelength interferograms with random phase shifts. Subsequently, the wrapped phases of single wavelength can be calculated by above two orthogonal independent components; thus the unambiguous phase of synthetic wavelength can be achieved. Both the simulation and experimental results show that the proposed approach reveals the advantages of high accuracy, rapid speed, high stability, and good adaptability for arbitrary phase shifts.
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13
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Nardin G, Colomb T, Emery Y, Moser C. Versatile spectral modulation of a broadband source for digital holographic microscopy. OPTICS EXPRESS 2016; 24:27791-27804. [PMID: 27906347 DOI: 10.1364/oe.24.027791] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We demonstrate the potential of spatial light modulators for the spectral control of a broadband source in digital holographic microscopy. Used in a 'pulse-shaping' geometry, the spatial light modulator provides a versatile control over the bandwidth and wavelength of the light source. The control of these properties enables adaptation to various experimental conditions. As a first application, we show that the source bandwidth can be adapted to the off-axis geometry to provide quantitative phase imaging over the whole field of view. As a second application, we generate sequences of appropriate wavelengths for a hierarchical optical phase unwrapping algorithm, which enables the measurement of the topography of high-aspect ratio structures without phase ambiguity. Examples are given with step heights up to 50 µm.
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14
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Khodadad D. Phase-derivative-based estimation of a digital reference wave from a single off-axis digital hologram. APPLIED OPTICS 2016; 55:1663-1669. [PMID: 26974627 DOI: 10.1364/ao.55.001663] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
This paper describes a method to obtain an estimated digital reference wave from a single off-axis digital hologram that matches the actual experimental reference wave as closely as possible. The proposed method is independent of a reference flat plate and speckles. The digital reference wave parameters are estimated directly from the recorded phase information. The parameters include both the off-axis tilt angle and the curvature of the reference wave. Phase derivatives are used to extract the digital reference wave parameters without the need for a phase unwrapping process. Thus, problems associated with phase wrapping are avoided. Experimental results for the proposed method are provided. The simulated effect of the digital reference wave parameters on the reconstructed image phase distribution is shown. The pseudo phase gradient originating from incorrect estimation of the digital reference wave parameters and its effect on object reconstruction are discussed.
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15
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Tayebi B, Sharif F, Jafarfard MR, Kim DY. Double-field-of-view, quasi-common-path interferometer using Fourier domain multiplexing. OPTICS EXPRESS 2015; 23:26825-26833. [PMID: 26480193 DOI: 10.1364/oe.23.026825] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
We present a quasi-common-path interferometer with a double field of view (FOV). The laser beam of an imaging system is separated into three parts using three mirrors; the first and second beams are used to image two different areas of a sample, while the third beam functions as a reference beam. The reference beam is prepared by making clear area in a sample and projecting it on an image sensor. A double FOV is obtained by Fourier domain multiplexing, whereby two interferometric images corresponding to two different areas of a sample are modulated with two different spatial carrier frequencies. The feasibility of this technique is experimentally demonstrated by imaging two different areas of a test target with a single image sensor.
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16
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Khodadad D, Bergström P, Hällstig E, Sjödahl M. Fast and robust automatic calibration for single-shot dual-wavelength digital holography based on speckle displacements. APPLIED OPTICS 2015; 54:5003-5010. [PMID: 26192658 DOI: 10.1364/ao.54.005003] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
The objective of this paper is to describe a fast and robust automatic single-shot dual-wavelength holographic calibration method that can be used for online shape measurement applications. We present a model of the correction in two terms for each lobe, one to compensate the systematic errors caused by off-axis angles and the other for the curvature of the reference waves, respectively. Each hologram is calibrated independently without a need for an iterative procedure or information of the experimental set-up. The calibration parameters are extracted directly from speckle displacements between different reconstruction planes. The parameters can be defined as any fraction of a pixel to avoid the effect of quantization. Using the speckle displacements, problems associated with phase wrapping is avoided. The procedure is shown to give a shape accuracy of 34 μm using a synthetic wavelength of 1.1 mm for a measurement on a cylindrical test object with a trace over a field of view of 18 mm×18 mm.
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Tayebi B, Jafarfard MR, Sharif F, Song YS, Har D, Kim DY. Large step-phase measurement by a reduced-phase triple-illumination interferometer. OPTICS EXPRESS 2015; 23:11264-11271. [PMID: 25969222 DOI: 10.1364/oe.23.011264] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/04/2023]
Abstract
We present a reduced-phase triple-illumination interferometer (RPTII) as a novel single-shot technique to increase the precision of dual-illumination optical phase unwrapping techniques. The technique employs two measurement ranges to record both low-precision unwrapped and high-precision wrapped phases. To unwrap the high-precision phase, a hierarchical optical phase unwrapping algorithm is used with the low-precision unwrapped phase. The feasibility of this technique is demonstrated by measuring a stepped object with a height 2100 times greater than the wavelength of the source. The phase is reconstructed without applying any numerical unwrapping algorithms, and its noise level is decreased by a factor of ten.
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18
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Majeed H, Kandel ME, Han K, Luo Z, Macias V, Tangella K, Balla A, Popescu G. Breast cancer diagnosis using spatial light interference microscopy. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:111210. [PMID: 26291148 DOI: 10.1117/1.jbo.20.11.111210] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/15/2015] [Accepted: 07/17/2015] [Indexed: 05/20/2023]
Abstract
The standard practice in histopathology of breast cancers is to examine a hematoxylin and eosin (H&E) stained tissue biopsy under a microscope to diagnose whether a lesion is benign or malignant. This determination is made based on a manual, qualitative inspection, making it subject to investigator bias and resulting in low throughput. Hence, a quantitative, label-free, and high-throughput diagnosis method is highly desirable. We present here preliminary results showing the potential of quantitative phase imaging for breast cancer screening and help with differential diagnosis. We generated phase maps of unstained breast tissue biopsies using spatial light interference microscopy (SLIM). As a first step toward quantitative diagnosis based on SLIM, we carried out a qualitative evaluation of our label-free images. These images were shown to two pathologists who classified each case as either benign or malignant. This diagnosis was then compared against the diagnosis of the two pathologists on corresponding H&E stained tissue images and the number of agreements were counted. The agreement between SLIM and H&E based diagnosis was 88% for the first pathologist and 87% for the second. Our results demonstrate the potential and promise of SLIM for quantitative, label-free, and high-throughput diagnosis.
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Affiliation(s)
- Hassaan Majeed
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
| | - Mikhail E Kandel
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
| | - Kevin Han
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
| | - Zelun Luo
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
| | - Virgilia Macias
- University of Illinois at Chicago, Department of Pathology, 840 South Wood Street, Suite 130 CSN, Chicago, Illinois 60612, United States
| | - Krishnarao Tangella
- University of Illinois at Urbana-Champaign, Christie Clinic and Department of Pathology, 1400 West Park Street, Urbana, Illinois 61801, United States
| | - Andre Balla
- University of Illinois at Chicago, Department of Pathology, 840 South Wood Street, Suite 130 CSN, Chicago, Illinois 60612, United States
| | - Gabriel Popescu
- University of Illinois at Urbana-Champaign, Department of Electrical and Computer Engineering, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, 405 North Mathews Avenue, Urbana, Illinois 61801, United States
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Sridharan S, Katz A, Soto-Adames F, Popescu G. Quantitative phase imaging of arthropods. JOURNAL OF BIOMEDICAL OPTICS 2015; 20:111212. [PMID: 26334858 PMCID: PMC4689101 DOI: 10.1117/1.jbo.20.11.111212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2015] [Accepted: 07/06/2015] [Indexed: 06/05/2023]
Abstract
Classification of arthropods is performed by characterization of fine features such as setae and cuticles. An unstained whole arthropod specimen mounted on a slide can be preserved for many decades, but is difficult to study since current methods require sample manipulation or tedious image processing. Spatial light interference microscopy (SLIM) is a quantitative phase imaging (QPI) technique that is an add-on module to a commercial phase contrast microscope. We use SLIM to image a whole organism springtail Ceratophysella denticulata mounted on a slide. This is the first time, to our knowledge, that an entire organism has been imaged using QPI. We also demonstrate the ability of SLIM to image fine structures in addition to providing quantitative data that cannot be obtained by traditional bright field microscopy.
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Affiliation(s)
- Shamira Sridharan
- University of Illinois at Urbana-Champaign, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, Department of Bioengineering, 405 North Matthews Avenue, Urbana, Illinois 61801, United States
| | - Aron Katz
- University of Illinois at Urbana-Champaign, Department of Entomology, 606 East Healey Street, Champaign, Illinois 61820, United States
| | - Felipe Soto-Adames
- University of Illinois at Urbana-Champaign, Department of Entomology, 606 East Healey Street, Champaign, Illinois 61820, United States
| | - Gabriel Popescu
- University of Illinois at Urbana-Champaign, Beckman Institute of Advanced Science and Technology, Quantitative Light Imaging Laboratory, Department of Bioengineering, 405 North Matthews Avenue, Urbana, Illinois 61801, United States
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20
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Zhang W, Lu X, Fei L, Zhao H, Wang H, Zhong L. Simultaneous phase-shifting dual-wavelength interferometry based on two-step demodulation algorithm. OPTICS LETTERS 2014; 39:5375-5378. [PMID: 26466276 DOI: 10.1364/ol.39.005375] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
A simultaneous phase-shifting dual-wavelength interferometry based on two-step demodulation algorithm is proposed in this Letter. First, two lasers with different wavelengths go through the same inline phase-shifting interference system simultaneously, and a sequence of five frames of simultaneous phase-shifting dual-wavelength interferograms (SPSDWIs) with the special phase shifts are captured by a monochrome CCD. Subsequently, using the subtraction between the first SPSDWI and the other SPSDWI, each wavelength of two frames of single-wavelength interference images (SWIIs) without the background can be achieved. Finally, using two-step demodulation algorithm, the wrapped phase of each single-wavelength can be determined easily and quickly with high accuracy.
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21
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Thiesing BP, Mann CJ, Dryepondt S. High temperature measurements of martensitic transformations using digital holography. APPLIED OPTICS 2013; 52:4426-4432. [PMID: 23842235 DOI: 10.1364/ao.52.004426] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2013] [Accepted: 05/21/2013] [Indexed: 06/02/2023]
Abstract
During thermal cycling of nickel-aluminum-platinum (NiAlPt) and single crystal iron-chromium-nickel (FeCrNi) alloys, the structural changes associated with the martensite to austenite phase transformation were measured using dual-wavelength digital holography. Real-time in situ measurements reveal the formation of striations within the NiAlPt alloy at 70°C and the FeCrNi alloy at 520°C. The results demonstrate that digital holography is an effective technique for acquiring noncontact, high precision information of the surface evolution of alloys at high temperatures.
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Affiliation(s)
- Benjamin P Thiesing
- Department of Physics and Astronomy, Northern Arizona University, Flagstaff, Arizona 86011, USA.
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Ito Y, Shimozato Y, Xia P, Tahara T, Kakue T, Awatsuji Y, Nishio K, Ura S, Kubota T, Matoba O. Four-Wavelength Color Digital Holography. ACTA ACUST UNITED AC 2012. [DOI: 10.1109/jdt.2012.2204956] [Citation(s) in RCA: 37] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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23
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Dubois F, Yourassowsky C. Full off-axis red-green-blue digital holographic microscope with LED illumination. OPTICS LETTERS 2012; 37:2190-2192. [PMID: 22739851 DOI: 10.1364/ol.37.002190] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
We developed a new full off-axis red-green-blue (RGB) digital holographic microscope with an LED illumination. A decisive advantage of the use of LED illumination is a large image quality improvement due to its partially coherent nature. The off-axis configuration enables the fast recording of the holographic data in each spectral channel. The digital holographic refocusing and the optical phase map computation are successfully demonstrated. The multiwavelength operation provides a significant improvement of the collected information for colored samples.
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Affiliation(s)
- F Dubois
- Microgravity Research Centre, Université Libre de Bruxelles, 50 Avenue Franklin Roosevelt, 1050 Brussels, Belgium.
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Memmolo P, Finizio A, Paturzo M, Ferraro P, Javidi B. Multi-wavelengths digital holography: reconstruction, synthesis and display of holograms using adaptive transformation. OPTICS LETTERS 2012; 37:1445-1447. [PMID: 22555699 DOI: 10.1364/ol.37.001445] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
A method based on spatial transformations of multiwavelength digital holograms and the correlation matching of their numerical reconstructions is proposed, with the aim to improve superimposition of different color reconstructed images. This method is based on an adaptive affine transform of the hologram that permits management of the physical parameters of numerical reconstruction. In addition, we present a procedure to synthesize a single digital hologram in which three different colors are multiplexed. The optical reconstruction of the synthetic hologram by a spatial light modulator at one wavelength allows us to display all color features of the object, avoiding loss of details.
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Affiliation(s)
- P Memmolo
- CNR Istituto Nazionale di Ottica-sezione di Napoli, Pozzuoli (Napoli), Italy.
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25
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Gao P, Yao B, Rupp R, Min J, Guo R, Ma B, Zheng J, Lei M, Yan S, Dan D, Ye T. Autofocusing based on wavelength dependence of diffraction in two-wavelength digital holographic microscopy. OPTICS LETTERS 2012; 37:1172-4. [PMID: 22466185 DOI: 10.1364/ol.37.001172] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
An autofocusing method for two-wavelength digital holographic microscopy (TWDHM) based on the wavelength dependence of the diffraction process is proposed. Red and green lights are employed for the illumination of the TWDHM, and the generated holograms are recorded simultaneously by a color CCD camera. Due to the wavelength dependency of the diffraction process, the farther the reconstruction plane is from the image plane, the larger the difference is between the red and green light distributions. Thus, the image plane can be determined by finding the minimum of the variation between the red and green lights on their amplitude distributions. The feasibility of the proposed method is demonstrated by simulation and experiment.
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Affiliation(s)
- Peng Gao
- State Key Laboratory of Transient Optics and Photonics, Xi’an Institute of Optics and Precision Mechanics, Chinese Academy of Sciences, Xi’an, China
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26
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Funamizu H, Aizu Y. Estimation of wavelength difference using scale adjustment in two-wavelength digital holographic interferometry. APPLIED OPTICS 2011; 50:6011-6018. [PMID: 22086028 DOI: 10.1364/ao.50.006011] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/31/2023]
Abstract
We propose a method for an estimation of wavelength difference using scale adjustment in two-wavelength digital holographic interferometry. To estimate wavelength difference, two holograms recorded with different wavelengths are reconstructed on the basis of the Fresnel diffraction integral, and pixel sizes in the reconstruction plane, which depend on the wavelength in recording hologram, are analyzed. In the analysis, a zero-padding method and an intensity correlation function are used to adjust pixel sizes in the reconstruction plane and then obtain a wavelength difference given by a difference between the pixel sizes. Theoretical predictions and experimental results are shown to indicate the usefulness of the proposed method in this paper.
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Affiliation(s)
- Hideki Funamizu
- Division of Science for Composite Functions, Muroran Institute of Technology, 27-1 Mizumoto, Muroran, Hokkaido 050-8585, Japan. ‐it.ac.jp
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Pelagotti A, Locatelli M, Geltrude AG, Poggi P, Meucci R, Paturzo M, Miccio L, Ferraro P. Reliability of 3D Imaging by Digital Holography at Long IR Wavelength. ACTA ACUST UNITED AC 2010. [DOI: 10.1109/jdt.2010.2041186] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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28
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Anand A, Chhaniwal VK, Javidi B. Real-Time Digital Holographic Microscopy for Phase Contrast 3D Imaging of Dynamic Phenomena. ACTA ACUST UNITED AC 2010. [DOI: 10.1109/jdt.2010.2052020] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
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29
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Kakue T, Ito K, Tahara T, Awatsuji Y, Nishio K, Ura S, Kubota T, Matoba O. Parallel Phase-Shifting Digital Holography Capable of Simultaneously Capturing Visible and Invisible Three-Dimensional Information. ACTA ACUST UNITED AC 2010. [DOI: 10.1109/jdt.2010.2046473] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022]
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30
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Rinehart MT, Shaked NT, Jenness NJ, Clark RL, Wax A. Simultaneous two-wavelength transmission quantitative phase microscopy with a color camera. OPTICS LETTERS 2010; 35:2612-4. [PMID: 20680075 DOI: 10.1364/ol.35.002612] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
We present a quantitative phase microscopy method that uses a Bayer mosaic color camera to simultaneously acquire off-axis interferograms in transmission mode at two distinct wavelengths. Wrapped phase information is processed using a two-wavelength algorithm to extend the range of the optical path delay measurements that can be detected using a single temporal acquisition. We experimentally demonstrate this technique by acquiring the phase profiles of optically clear microstructures without 2pi ambiguities. In addition, the phase noise contribution arising from spectral channel crosstalk on the color camera is quantified.
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Affiliation(s)
- Matthew T Rinehart
- Department of Biomedical Engineering, Fitzpatrick Institute for Photonics, Duke University, Durham, North Carolina 27708, USA.
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31
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Kakue T, Moritani Y, Ito K, Shimozato Y, Awatsuji Y, Nishio K, Ura S, Kubota T, Matoba O. Image quality improvement of parallel four-step phase-shifting digital holography by using the algorithm of parallel two-step phase-shifting digital holography. OPTICS EXPRESS 2010; 18:9555-60. [PMID: 20588802 DOI: 10.1364/oe.18.009555] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
Abstract
We propose an algorithm that can improve the quality of the reconstructed image from the single hologram recorded by the optical system of the parallel four-step phase-shifting digital holography. The proposed algorithm applies the image-reconstruction algorithm of parallel two-step phase-shifting digital holography to the hologram so as to reduce errors in the reconstructed image and eliminate ghosts. We numerically and experimentally confirmed that the proposed algorithm decreased 25% in terms of root mean square error in amplitude, and eliminated the ghosts, respectively.
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Affiliation(s)
- Takashi Kakue
- Graduate School of Science and Technology, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto, 606-8585, Japan
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32
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Wang Y, Yang S, Gou X. Modified Fourier transform method for 3D profile measurement without phase unwrapping. OPTICS LETTERS 2010; 35:790-792. [PMID: 20195354 DOI: 10.1364/ol.35.000790] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/28/2023]
Abstract
An algorithm based on the Fourier transform method without phase unwrapping is proposed to measure the 3D profile of objects. Phase unwrapping is essential and time consuming in conventional fringe projection techniques. To avoid this step, the method utilizes a color fringe pattern to substitute a gray-level fringe pattern. Intensity information can be used to extract the wrapped phase, while color information can be used to calculate the phase shift range. Combining the two parts, real phase value can be obtained without phase unwrapping. Experiments are conducted to verify the feasibility of this method.
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Affiliation(s)
- Yajun Wang
- Department of Precision Machinery and Precision Instrumentation, University of Science and Technology of China, Hefei 230027, China
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33
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Paturzo M, Memmolo P, Tulino A, Finizio A, Ferraro P. Investigation of angular multiplexing and de-multiplexing of digital holograms recorded in microscope configuration. OPTICS EXPRESS 2009; 17:8709-8718. [PMID: 19466119 DOI: 10.1364/oe.17.008709] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/27/2023]
Abstract
We investigated a method for the angular multiplexing and de-multiplexing of digital holograms recorded in microscope off-axis configuration. The multiplexing has been performed rotating numerically one hologram at different angles and adding all the rotated holograms to obtain a single synthetic digital hologram. Then the digital holograms were de-multiplexed thanks to the unique property of the digital holography to manage numerically the complex wavefields at different image planes. We show that it is possible to retrieve correctly quantitative information about the amplitude and phase maps. The obtained results can be useful to employ the multiplexing technique during the recording process by rotating the CCD array.
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Affiliation(s)
- M Paturzo
- CNR - Istituto Nazionale di Ottica Applicata & Istituto di Cibernetica, via Campi Flegrei 34, 80078-Pozzuoli (NA), Italy.
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34
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Khmaladze A, Kim M, Lo CM. Phase imaging of cells by simultaneous dual-wavelength reflection digital holography. OPTICS EXPRESS 2008; 16:10900-11. [PMID: 18648403 DOI: 10.1364/oe.16.010900] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/29/2008] [Accepted: 06/30/2008] [Indexed: 05/22/2023]
Abstract
We present a phase-imaging technique to quantitatively study the three-dimensional structure of cells. The method, based on the simultaneous dual-wavelength digital holography, allows for higher axial range at which the unambiguous phase imaging can be performed. The technique is capable of nanometer axial resolution. The noise level, which increases as a result of using two wavelengths, is then reduced to the level of a single wavelength. The method compares favorably to software unwrapping, as the technique does not produce non-existent phase steps. Curvature mismatch between the reference and object beams is numerically compensated. The 3D images of SKOV-3 ovarian cancer cells are presented.
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35
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Mann CJ, Bingham PR, Paquit VC, Tobin KW. Quantitative phase imaging by three-wavelength digital holography. OPTICS EXPRESS 2008; 16:9753-64. [PMID: 18575544 DOI: 10.1364/oe.16.009753] [Citation(s) in RCA: 73] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Three-wavelength digital holography is applied to obtain surface height measurements over several microns of range, while simultaneously maintaining the low noise precision of the single wavelength phase measurement. The precision is preserved by the use of intermediate synthetic wavelength steps generated from the three wavelengths and the use of hierarchical optical phase unwrapping. As the complex wave-front of each wavelength can be captured simultaneously in one digital image, real-time performance is achievable.
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36
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Khmaladze A, Restrepo-Martínez A, Kim M, Castañeda R, Blandón A. Simultaneous dual-wavelength reflection digital holography applied to the study of the porous coal samples. APPLIED OPTICS 2008; 47:3203-3210. [PMID: 18545294 DOI: 10.1364/ao.47.003203] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/26/2023]
Abstract
We present a simultaneous dual-wavelength phase-imaging digital holographic technique demonstrated on porous coal samples. The use of two wavelengths enables us to increase the axial range at which the unambiguous phase imaging can be performed, but also increases the noise. We employ a noise reduction "fine map" algorithm, which uses the two-wavelength phase map as a guide to correct a single-wavelength phase image. Then, the resulting noise of a fine map is reduced to the level of single-wavelength noise. A comparison to software unwrapping is also presented. A simple way of correcting a curvature mismatch between the reference and the object beams is offered.
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Affiliation(s)
- Alexander Khmaladze
- Department of Physics, University of South Florida, Tampa, Florida 33620, USA.
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37
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King SV, Libertun A, Piestun R, Cogswell CJ, Preza C. Quantitative phase microscopy through differential interference imaging. JOURNAL OF BIOMEDICAL OPTICS 2008; 13:024020. [PMID: 18465983 DOI: 10.1117/1.2907328] [Citation(s) in RCA: 15] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
An extension of Nomarski differential interference contrast microscopy enables isotropic linear phase imaging through the combination of phase shifting, two directions of shear, and Fourier space integration using a modified spiral phase transform. We apply this method to simulated and experimentally acquired images of partially absorptive test objects. A direct comparison of the computationally determined phase to the true object phase demonstrates the capabilities of the method. Simulation results predict and confirm results obtained from experimentally acquired images.
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Affiliation(s)
- Sharon V King
- University of Colorado, Department of Electrical and Computer Engineering, Campus Box 425 UCB Boulder, Colorado 80309-0425, USA.
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