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Holladay S, Zhang Z. Programmable focused laser differential interferometer with a spatial light modulator as a dynamic diffractive optical element. OPTICS LETTERS 2023; 48:5001-5004. [PMID: 37773370 DOI: 10.1364/ol.496541] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Accepted: 08/18/2023] [Indexed: 10/01/2023]
Abstract
A spatial light modulator (SLM) is incorporated into a focused laser differential interferometer (FLDI) to generate a nonlinear array of beams, and this setup is used to measure the power spectral density of a Mach-1.5, underexpanded jet of air. The results are compared with measurements from a 1-point FLDI to assess the feasibility of using SLMs in FLDI to serve as dynamic diffractive elements for generating beam arrays of any shape. The spectra comparison illustrates that spatial light modulated-FLDI (SLM-FLDI) detects similar spectral profiles to that of 1-point FLDI, especially dominant frequencies in the jet. SLM-FLDI could provide a useful expansion of FLDI capabilities.
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Sun J, Wu J, Wu S, Goswami R, Girardo S, Cao L, Guck J, Koukourakis N, Czarske JW. Quantitative phase imaging through an ultra-thin lensless fiber endoscope. LIGHT, SCIENCE & APPLICATIONS 2022; 11:204. [PMID: 35790748 PMCID: PMC9255502 DOI: 10.1038/s41377-022-00898-2] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2022] [Revised: 06/10/2022] [Accepted: 06/16/2022] [Indexed: 05/29/2023]
Abstract
Quantitative phase imaging (QPI) is a label-free technique providing both morphology and quantitative biophysical information in biomedicine. However, applying such a powerful technique to in vivo pathological diagnosis remains challenging. Multi-core fiber bundles (MCFs) enable ultra-thin probes for in vivo imaging, but current MCF imaging techniques are limited to amplitude imaging modalities. We demonstrate a computational lensless microendoscope that uses an ultra-thin bare MCF to perform quantitative phase imaging with microscale lateral resolution and nanoscale axial sensitivity of the optical path length. The incident complex light field at the measurement side is precisely reconstructed from the far-field speckle pattern at the detection side, enabling digital refocusing in a multi-layer sample without any mechanical movement. The accuracy of the quantitative phase reconstruction is validated by imaging the phase target and hydrogel beads through the MCF. With the proposed imaging modality, three-dimensional imaging of human cancer cells is achieved through the ultra-thin fiber endoscope, promising widespread clinical applications.
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Affiliation(s)
- Jiawei Sun
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany.
- Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany.
| | - Jiachen Wu
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany
- State Key Laboratory of Precision Measurement Technology and Instruments, Department of Precision Instruments, Tsinghua University, 100084, Beijing, China
| | - Song Wu
- Institute for Integrative Nanosciences, IFW Dresden, Helmholtzstraße 20, 01069, Dresden, Germany
| | - Ruchi Goswami
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, 91058, Erlangen, Germany
| | - Salvatore Girardo
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, 91058, Erlangen, Germany
| | - Liangcai Cao
- State Key Laboratory of Precision Measurement Technology and Instruments, Department of Precision Instruments, Tsinghua University, 100084, Beijing, China
| | - Jochen Guck
- Max Planck Institute for the Science of Light & Max-Planck-Zentrum für Physik und Medizin, 91058, Erlangen, Germany
- Cluster of Excellence Physics of Life, TU Dresden, Dresden, Germany
| | - Nektarios Koukourakis
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany.
- Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany.
| | - Juergen W Czarske
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany.
- Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany.
- Cluster of Excellence Physics of Life, TU Dresden, Dresden, Germany.
- Institute of Applied Physics, TU Dresden, Dresden, Germany.
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Sun J, Wu J, Koukourakis N, Cao L, Kuschmierz R, Czarske J. Real-time complex light field generation through a multi-core fiber with deep learning. Sci Rep 2022; 12:7732. [PMID: 35546604 PMCID: PMC9095618 DOI: 10.1038/s41598-022-11803-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 04/28/2022] [Indexed: 12/26/2022] Open
Abstract
The generation of tailored complex light fields with multi-core fiber (MCF) lensless microendoscopes is widely used in biomedicine. However, the computer-generated holograms (CGHs) used for such applications are typically generated by iterative algorithms, which demand high computation effort, limiting advanced applications like fiber-optic cell manipulation. The random and discrete distribution of the fiber cores in an MCF induces strong spatial aliasing to the CGHs, hence, an approach that can rapidly generate tailored CGHs for MCFs is highly demanded. We demonstrate a novel deep neural network-CoreNet, providing accurate tailored CGHs generation for MCFs at a near video rate. The CoreNet is trained by unsupervised learning and speeds up the computation time by two magnitudes with high fidelity light field generation compared to the previously reported CGH algorithms for MCFs. Real-time generated tailored CGHs are on-the-fly loaded to the phase-only spatial light modulator (SLM) for near video-rate complex light fields generation through the MCF microendoscope. This paves the avenue for real-time cell rotation and several further applications that require real-time high-fidelity light delivery in biomedicine.
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Affiliation(s)
- Jiawei Sun
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany. .,Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany.
| | - Jiachen Wu
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany. .,State Key Laboratory of Precision Measurement Technology and Instruments, Department of Precision Instruments, Tsinghua University, Beijing, 100084, China.
| | - Nektarios Koukourakis
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany.,Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany
| | - Liangcai Cao
- State Key Laboratory of Precision Measurement Technology and Instruments, Department of Precision Instruments, Tsinghua University, Beijing, 100084, China
| | - Robert Kuschmierz
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany.,Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany
| | - Juergen Czarske
- Laboratory of Measurement and Sensor System Technique (MST), TU Dresden, Helmholtzstrasse 18, 01069, Dresden, Germany. .,Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany. .,Cluster of Excellence Physics of Life, TU Dresden, Dresden, Germany. .,Institute of Applied Physics, TU Dresden, Dresden, Germany.
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Schmieder F, Habibey R, Striebel J, Büttner L, Czarske J, Busskamp V. Tracking connectivity maps in human stem cell-derived neuronal networks by holographic optogenetics. Life Sci Alliance 2022; 5:5/7/e202101268. [PMID: 35418473 PMCID: PMC9008225 DOI: 10.26508/lsa.202101268] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 03/25/2022] [Accepted: 03/29/2022] [Indexed: 11/24/2022] Open
Abstract
Holographic optogenetic stimulation of human iPSC–derived neuronal networks was exploited to map precise functional connectivity motifs and their long-term dynamics during network development. Neuronal networks derived from human induced pluripotent stem cells have been exploited widely for modeling neuronal circuits, neurological diseases, and drug screening. As these networks require extended culturing periods to functionally mature in vitro, most studies are based on immature networks. To obtain insights on long-term functional features, we improved a glia–neuron co-culture protocol within multi-electrode arrays, facilitating continuous assessment of electrical features in weekly intervals. By full-field optogenetic stimulation, we detected an earlier onset of neuronal firing and burst activity compared with spontaneous activity. Full-field stimulation enhanced the number of active neurons and their firing rates. Compared with full-field stimulation, which evoked synchronized activity across all neurons, holographic stimulation of individual neurons resulted in local activity. Single-cell holographic stimulation facilitated to trace propagating evoked activities of 400 individually stimulated neurons per multi-electrode array. Thereby, we revealed precise functional neuronal connectivity motifs. Holographic stimulation data over time showed increasing connection numbers and strength with culture age. This holographic stimulation setup has the potential to establish a profound functional testbed for in-depth analysis of human-induced pluripotent stem cell-derived neuronal networks.
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Affiliation(s)
- Felix Schmieder
- Laboratory of Measurement and Sensor System Technique, Faculty of Electrical and Computer Engineering, TU Dresden, Dresden, Germany
| | - Rouhollah Habibey
- Department of Ophthalmology, Universitäts-Augenklinik Bonn, University of Bonn, Bonn, Germany
| | - Johannes Striebel
- Department of Ophthalmology, Universitäts-Augenklinik Bonn, University of Bonn, Bonn, Germany
| | - Lars Büttner
- Laboratory of Measurement and Sensor System Technique, Faculty of Electrical and Computer Engineering, TU Dresden, Dresden, Germany
| | - Jürgen Czarske
- Laboratory of Measurement and Sensor System Technique, Faculty of Electrical and Computer Engineering, TU Dresden, Dresden, Germany .,Competence Center for Biomedical Computational Laser Systems (BIOLAS), TU Dresden, Dresden, Germany.,Cluster of Excellence Physics of Life, TU Dresden, Dresden, Germany.,Institute of Applied Physics, School of Science, TU Dresden, Dresden, Germany
| | - Volker Busskamp
- Department of Ophthalmology, Universitäts-Augenklinik Bonn, University of Bonn, Bonn, Germany
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Two-Wavelength Computational Holography for Aberration-Corrected Simultaneous Optogenetic Stimulation and Inhibition of In Vitro Biological Samples. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12052283] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/05/2023]
Abstract
Optogenetics is a versatile toolset for the functional investigation of excitable cells such as neurons and cardiomyocytes in vivo and in vitro. While monochromatic illumination of these cells for either stimulation or inhibition already enables a wide range of studies, the combination of activation and silencing in one setup facilitates new experimental interrogation protocols. In this work, we present a setup for the simultaneous holographic stimulation and inhibition of multiple cells in vitro. The system is based on two fast ferroelectric liquid crystal spatial light modulators with frame rates of up to 1.7 kHz. Thereby, we are able to illuminate up to about 50 single spots with better than cellular resolution and without crosstalk, perfectly suited for refined network analysis schemes. System-inherent aberrations are corrected by applying an iterative optimization scheme based on Zernike polynomials. These are superposed on the same spatial light modulators that display the pattern-generating holograms, hence no further adaptive optical elements are needed for aberration correction. A near-diffraction-limited spatial resolution is achieved over the whole field of view, enabling subcellular optogenetic experiments by just choosing an appropriate microscope objective. The setup can pave the way for a multitude of optogenetic experiments, in particular with cardiomyocytes and neural networks.
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Krug B, Koukourakis N, Guck J, Czarske J. Nonlinear microscopy using impulsive stimulated Brillouin scattering for high-speed elastography. OPTICS EXPRESS 2022; 30:4748-4758. [PMID: 35209449 DOI: 10.1364/oe.449980] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Accepted: 12/27/2021] [Indexed: 06/14/2023]
Abstract
The impulsive stimulated Brillouin microscopy promises fast, non-contact measurements of the elastic properties of biological samples. The used pump-probe approach employs an ultra-short pulse laser and a cw laser to generate Brillouin signals. Modeling of the microscopy technique has already been carried out partially, but not for biomedical applications. The nonlinear relationship between pulse energy and Brillouin signal amplitude is proven with both simulations and experiments. Tayloring of the excitation parameters on the biologically relevant polyacrylamide hydrogels outline sub-ms temporal resolutions at a relative precision of <1%. Brillouin microscopy using the impulsive stimulated scattering therefore exhibits high potential for the measurements of viscoelastic properties of cells and tissues.
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Abstract
Wavefront shaping through a multi-core fiber (MCF) is turning into an attractive method for endoscopic imaging and optical cell-manipulation on a chip. However, the discrete distribution and the low number of cores induce pixelated phase modulation, becoming an obstacle for delivering complex light field distributions through MCFs. We demonstrate a novel phase retrieval algorithm named Core–Gerchberg–Saxton (Core-GS) employing the captured core distribution map to retrieve tailored modulation hologram for the targeted intensity distribution at the distal far-field. Complex light fields are reconstructed through MCFs with high fidelity up to 96.2%. Closed-loop control with experimental feedback denotes the capability of the Core-GS algorithm for precise intensity manipulation of the reconstructed light field. Core-GS provides a robust way for wavefront shaping through MCFs; it facilitates the MCF becoming a vital waveguide in endoscopic and lab-on-a-chip applications.
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Scharf E, Dremel J, Kuschmierz R, Czarske J. Video-rate lensless endoscope with self-calibration using wavefront shaping. OPTICS LETTERS 2020; 45:3629-3632. [PMID: 32630916 DOI: 10.1364/ol.394873] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/14/2023]
Abstract
Lensless fiber endoscopes are of great importance for keyhole imaging. Coherent fiber bundles (CFB) can be used in endoscopes as remote phased arrays to capture images. One challenge is to image at high speed while correcting aberrations induced by the CFB. We propose the combination of digital optical phase conjugation, using a spatial light modulator, with fast scanning, for which a 2D galvo scanner and an adaptive lens are employed. We achieve the transmission of laser and image scanning through the CFB. Video-rate imaging at 20 Hz in 2D with subcellular resolution is demonstrated in 3D with 1 Hz. The sub-millimeter-diameter scanning endoscope has a great potential in biomedicine, for manipulation, e.g., in optogenetics, as well as in imaging.
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Wu D, Qin L, Luo J, Liao Z, Chen X, Chui HC, Shen Y. Delivering targeted color light through a multimode fiber by field synthesis. OPTICS EXPRESS 2020; 28:19700-19710. [PMID: 32672241 DOI: 10.1364/oe.396184] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2020] [Accepted: 06/13/2020] [Indexed: 06/11/2023]
Abstract
Recent developments of wavefront shaping make the multimode fiber (MMF) as a promising tool to deliver images in endoscopy. However, previous studies using the MMF were limited to monochromatic light or polychromatic light with narrow bandwidth. The desires for colored imaging stimulate us to deliver multi-wavelength light that covers the entire visible spectrum through the MMF. In this work, we demonstrated delivering targeted color light through the MMF by mixing three primary colors (red, green, and blue) with a single spatial light modulator. The optimum phase map that considers all three colors was generated through field synthesis (FS), which requires every pixel of the SLM to partially account for all colors. With both theoretical and numerical approaches, we showed that FS exhibited much better performance than the previously developed spatial segmentation method that employs different pixels to represent different colors. Moreover, by computationally adjusting the compositions of the weight for each color, the colors of the delivered focus can be switched at video framerate. We anticipate that our work paves a way for future applications of delivering color images through the MMF in endoscopy.
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