Turtle carapace anomalies: the roles of genetic diversity and environment

Congenital malformation in green turtle embryos and hatchlings

Successful embryonic development depends on the interaction between genetic factors and environmental variables. Congenital malformations in sea turtles can result from extreme conditions during the incubation period, reducing hatching success and potentially impeding population recovery. We aimed to characterize the congenital malformations found in green turtle nests, determine their prevalence and severity, and understand their drivers during the 2022 nesting season on Samandağ beach on northern Mediterranean nesting beaches. A total of 2986 examples of congenital malformations were observed in 362 out of 907 green turtle nests. The prevalence of congenital malformations per nest was 39%, and the severity (the number of malformed individuals per nest) was 3.8%. Nests with congenital malformations exhibited a lower mean distance from the sea, a shorter incubation duration (a proxy for incubation temperature), lower hatching success, a larger clutch size, and higher mortality at late embryonic and hatchling stages than nests without congenital malformations. There was no significant difference in total mortality between these two nest types. A total of 52 different congenital malformations were recorded, 2 of which were observed for the first time in sea turtles and 28 for the first time in green turtles. The results suggest that congenital malformations may be related to nest temperature and clutch size, while overall mortality may be independent of malformations. Pigmentation disorders and craniofacial malformations typically coexist in cases of multiple malformations. Long-term monitoring of congenital malformations is crucial, as it can provide clues about the health status of the nesting beach and nesting colony.

Effects of the egg incubation environment on turtle carapace development

Developing organisms are often exposed to fluctuating environments that destabilize tissue-scale processes and induce abnormal phenotypes. This might be common in species that lay eggs in the external environment and with little parental care, such as many reptiles. In turtles, morphological development has provided striking examples of abnormal phenotypic patterns, though the influence of the environment remains unclear. To this end, we compared fluctuating asymmetry, as a proxy for developmental instability, in turtle hatchlings incubated in controlled laboratory and unstable natural conditions. Wild and laboratory hatchlings featured similar proportions of supernumerary scales (scutes) on the dorsal shell (carapace). Such abnormal scutes likely elevated shape asymmetry, which was highest in natural nests. Moreover, we tested the hypothesis that hot and dry environments cause abnormal scute formation by subjecting eggs to a range of hydric and thermal laboratory incubation regimes. Shape asymmetry was similar in hatchlings incubated at five constant temperatures (26-30°C). A hot (30°C) and severely Dry substrate yielded smaller hatchlings but scutes were not overtly affected. Our study suggests that changing nest environments contribute to fluctuating asymmetry in egg-laying reptiles, while clarifying the conditions at which turtle shell development remains buffered from the external environment.

The oldest evidence of Testudo graeca (Testudinidae) in the Iberian Peninsula

The Testudo graeca (i.e., Greek Tortoise or Spur-thighed Tortoise) origin in Western Europe is a subject of debate within the scientific community. The species is a part of the current Spanish biodiversity, with three isolated populations, located in the south-eastern (Almeria and Murcia) and south-western (Doñana National Park, Andalusia) areas of the Iberian Peninsula, and in the Mallorca Island (Balearic Islands). Throughout the 19th and 20th centuries, putative references to the presence of Testudo graeca in the Iberian paleontological and archaeozoological records were relatively common. However, many of them were refuted in subsequent papers and, those that were not, are currently considered as doubtful. The aim of this work is to present and describe the oldest indisputable remains of Testudo graeca in the Iberian Peninsula. They correspond to several individuals, hitherto unpublished, recovered as grave goods in two tombs at the Plaza Marqués de Busianos 5 site (Valencia, eastern Spain), dated between the first and second centuries AD.

Shell Anomalies in the European Aquatic Stem Turtle Pleurosternon bullockii (Paracryptodira, Pleurosternidae)

The uppermost Jurassic to lowermost Cretaceous stem turtle Pleurosternon bullockii is the pleurosternid (Testudinata, Paracryptodira) known by the largest number of specimens worldwide, composing the largest European collection of Lower Cretaceous complete and partial shells for a turtle taxon. The availability of numerous specimens as well as their generally good preservation allowed for recent detailed characterization of the shell of this species, including states that are variable at the intraspecific level (individual variability, sexual dimorphism, and ontogenetic development). However, extreme cases of morphological variation corresponding to anomalies have not been addressed in detail, neither for P. bullockii nor for any other member of Paracryptodira. In this context, the study of several shell anomalies in P. bullockii is carried out here. Fourteen specimens showing anomalies are recognized and examined here to determine the frequency and distribution of these shell anatomical deviations. All these anomalies are described and figured. The morphogenetic cause of each of them is discussed. As a consequence, a relatively broad spectrum of anomalies is reported for P. bullockii. None of the anomalies seem to present negative consequences for vital activities of the specimens since none compromised the main functions of the shell.

High frequency of an otherwise rare phenotype in a small and isolated tiger population

Most endangered species exist today in small populations, many of which are isolated. Evolution in such populations is largely governed by genetic drift. Empirical evidence for drift affecting striking phenotypes based on substantial genetic data are rare. Approximately 37% of tigers (Panthera tigris) in the Similipal Tiger Reserve (in eastern India) are pseudomelanistic, characterized by wide, merged stripes. Camera trap data across the tiger range revealed the presence of pseudomelanistic tigers only in Similipal. We investigated the genetic basis for pseudomelanism and examined the role of drift in driving this phenotype's frequency. Whole-genome data and pedigree-based association analyses from captive tigers revealed that pseudomelanism cosegregates with a conserved and functionally important coding alteration in Transmembrane Aminopeptidase Q (Taqpep), a gene responsible for similar traits in other felid species. Noninvasive sampling of tigers revealed a high frequency of the Taqpep p.H454Y mutation in Similipal (12 individuals, allele frequency = 0.58) and absence from all other tiger populations (395 individuals). Population genetic analyses confirmed few (minimal number) tigers in Similipal, and its genetic isolation, with poor geneflow. Pairwise FST (0.33) at the mutation site was high but not an outlier. Similipal tigers had low diversity at 81 single nucleotide polymorphisms (mean heterozygosity = 0.28, SD = 0.27). Simulations were consistent with founding events and drift as possible drivers for the observed stark difference of allele frequency. Our results highlight the role of stochastic processes in the evolution of rare phenotypes. We highlight an unusual evolutionary trajectory in a small and isolated population of an endangered species.

Evaluation of spot patterns and carapace abnormalities of an Endangered freshwater turtle, Clemmys guttata, as a potential tool for population assignment

Many of the world’s contemporary species of turtle are extinct or threatened with extinction due to habitat loss, increases in anthropogenic sources of mortality, and poaching (illegal collection). The slow life-history strategy of most turtle species magnifies the effects of poaching because the loss of even a few mature individuals can impact population growth. Returning poached turtles to their population of origin, where possible, can mitigate these effects, but identifying the origin of these individuals can be challenging. We hypothesized that spot patterns might allow assignment of Endangered spotted turtles Clemmys guttata to their population of origin. We characterized and compared spot patterns from carapace photographs of 126 individuals from 10 sites. To explore other types of information these photographs might provide, we also documented carapacial scute abnormalities and quantified their association with genetic diversity and latitude. Spot pattern similarity was not higher within populations than among populations and did not accurately differentiate populations. Carapacial scute abnormalities occurred in 82% of turtles and were not correlated with estimates of neutral genetic diversity. Abnormalities were positively correlated with latitude, implicating thermal stress during the early stages of development in the generation of some scute deformities. However, this relationship became non-significant when line (scute seam) abnormalities were excluded from the data, suggesting a different primary cause for the more severe scute deformities. Further research should continue to investigate the drivers of these deformities, as monitoring shifts in the frequency of scute deformities may provide relevant information for conservation and recovery of endangered turtles.

Blanding's Turtle Demography and Population Viability

In anticipation of U.S. federal status classification (warranted, warranted but precluded, not warranted), scheduled for 2023, we provide population viability analysis of the Blanding's turtle Emydoidea blandingii, a long-lived, late-maturing, semi-aquatic species of conservation concern throughout its range. We present demographic data from long-term study of a population in northeastern Illinois and use these data as the basis for viability and sensitivity analyses focused on parameter uncertainty and geographic parameter variation. We use population viability analysis to identify population sizes necessary to provide population resiliency to stochastic disturbance events and catastrophes, and demonstrate how alternative definitions of ‘foreseeable future' might affect status decisions. Demographic parameters within our focal population resulted in optimistic population projections (probability of extinction = 0% over 100 y) but results were less optimistic when catastrophes or uncertainty in parameter estimates were incorporated (probability of extinction = 3% and 16%, respectively). Uncertainty in estimates of age-specific mortality had the biggest impact on population viability analysis outcomes but uncertainty in other parameters (age of first reproduction, environmental variation in age-specific mortality, percent of females reproducing, clutch size) also contributed. Blanding's turtle demography varies geographically and incorporating this variation resulted in both mortality- and fecundity-related parameters affecting population viability analysis outcomes. Possibly, compensatory variation among demographic parameters allows for persistence across a wide range of parameter values. We found that extinction risk decreased and retention of genetic diversity increased rapidly with increasing initial population size. In the absence of catastrophes, demographic conservation goals could be met with a smaller initial population size than could genetic conservation goals; ≥20–50 adults were necessary for extinction risk <5%, whereas ≥50–110 adults were necessary to retain >95% of existing genetic diversity over 100 y. These thresholds shifted upward when catastrophes were included; ≥50–200 adults were necessary for extinction risk <5% and ≥110 to >200 adults were necessary to retain >95% of existing genetic diversity over 100 y. Impediments to Blanding's turtle conservation include an incomplete understanding of geographic covariation among demographic parameters, the large amount of effort necessary to estimate and monitor abundance, and uncertainty regarding the impacts of increasingly frequent extreme weather events.

Variation in shell morphology of the European pond turtle, Emys orbicularis, in fragmented central European populations

The European pond turtle (Emys orbicularis) is a widely distributed freshwater species inhabiting much of Europe, but it is often in population decrease or is locally extinct. In this study, we sampled five central European populations, of which four were autochthonous and one was introduced outside the native range. Moreover, two of the native populations were relatively isolated and at the periphery of the species, range. Using the frequency of shell anomalies, a geometric morphometric framework and an analysis of fluctuating asymmetry, we aimed to determine the degree of morphological differentiation among different populations. Significantly, a smaller number of individuals with a malformed shell or scutes occurred in the native core range population, which potentially has a high level of gene flow (Hungary). Although neither canonical variate analysis nor the morphological disparity analysis showed distinct differences between populations, we found significantly higher shell asymmetry in the two marginal populations (Austria and Slovakia) compared with the core range populations. Our results might thus support the central–marginal hypothesis and indicate potential genetically based conservation problems owing to demographic bottlenecks and/or isolation in marginal populations.

No evidence of selection against anomalous scute arrangements between juvenile and adult sea turtles in Florida

Variations in the number and arrangement of scutes often are used for species identification in hard-shelled sea turtles. Despite the conserved nature of scute arrangements, anomalous arrangements have been noted in the literature for over a century, with anomalies linked to sub-optimal environmental conditions in the nest during development. Long-held assumptions suggest that anomalous scute arrangements are indicative of underlying physiological or morphological anomalies, with presumed long-term survival costs to the individual. Here, we examined a 25-year photo database of two species of sea turtle (Caretta caretta and Chelonia mydas) captured incidentally and non-selectively on the eastern coast of Florida. Our results suggest that C. mydas is substantially more variable with respect to the arrangement of carapacial scutes, while C. caretta had a relatively higher proportion of individuals with anomalous plastron scute arrangements. We also show evidence that (a) the forms and patterns of anomalous scutes are stable throughout growth; (b) there is limited evidence for selection against non-modal arrangements in the size classes that were examined; and (c) that their frequency has remained stable in juvenile cohorts from 1994 until present. These findings indicate that there may not be a survival cost associated with anomalous scute arrangements once the turtles reach juvenile size classes, and that variation in scute arrangements within populations is relatively common.

Abnormal persistence of the chorioallantoic membrane is associated with severe developmental abnormalities in freshwater turtles

Development in oviparous reptiles requires the correct formation and function of extra-embryonic membranes in the egg. In 2017, we incubated 2583 eggs from five species of freshwater turtle during a long-term ecological study and opened eggs that failed to hatch. We described a previously unreported developmental anomaly: the retention of an extra-embryonic membrane around 7 turtles (1 Spiny Softshell Turtle (Apalone spinifera (Le Sueur, 1827)), 1 Snapping Turtle (Chelydra serpentina (Linnaeus, 1758)), and 5 Northern Map Turtles (Graptemys geographica (Le Sueur, 1817))) that were alive but unhatched >14 days after their clutch mates had emerged. We investigated the association between retention of this membrane and the exhibition of other developmental deformities of varying severity, and we tested whether this novel abnormality was associated with reduced fertility or hatching success in affected clutches. Consultation of ∼150 years of literature suggests that we observed persistence of the chorioallantoic membrane (CAM; also called the chorioallantois). Our data suggest that clutches where at least one turtle exhibits a persistent CAM may also exhibit slightly reduced fertility or hatch success in the rest of the clutch compared with conspecific clutches that do not contain this anomaly. Future research should investigate the factors predicting CAM retention and other developmental abnormalities.

Close-kin mating, but not inbred parents, reduces hatching rates and offspring quality in a threatened tortoise

Inbreeding depression, the reduction in fitness due to mating of related individuals, is of particular conservation concern in species with small, isolated populations. Although inbreeding depression is widespread in natural populations, long-lived species may be buffered from its effects during population declines due to long generation times and thus are less likely to have evolved mechanisms of inbreeding avoidance than species with shorter generation times. However, empirical evidence of the consequences of inbreeding in threatened, long-lived species is limited. In this study, we leverage a well-studied population of gopher tortoises, Gopherus polyphemus, to examine the role of inbreeding depression and the potential for behavioural inbreeding avoidance in a natural population of a long-lived species. We tested the hypothesis that increased parental inbreeding leads to reduced hatching rates and offspring quality. Additionally, we tested for evidence of inbreeding avoidance. We found that high parental relatedness results in offspring with lower quality and that high parental relatedness is correlated with reduced hatching success. However, we found that hatching success and offspring quality increase with maternal inbreeding, likely due to highly inbred females mating with more distantly related males. We did not find evidence for inbreeding avoidance in males and outbred females, suggesting sex-specific evolutionary trade-offs may have driven the evolution of mating behaviour. Our results demonstrate inbreeding depression in a long-lived species and that the evolution of inbreeding avoidance is shaped by multiple selective forces.

Supernumerary scutes verify a segment-dependent model of the horny shell development in turtles

Turtle horny shell has a scute pattern, which is conservative through evolution and across species. The discovery of epidermal placodes as the scute primordia and their strict topographical association to the somites of the turtle embryo suggested a new interpretation of the developmental mechanism of the scute pattern. Here, we tested the hypothesis that horny scutes develop from a mosaic of placodes corresponding exactly to the paths of myoseptae, with vertebral and pleural scutes developing staggered in adjacent segments, and marginal scutes developing in every segment. This scheme predicts little variation in marginals and suggests intercalary supernumerary scutes as potential variations for the vertebral and pleural rows. We examined spatial and numerical variations of the horny shell in 655 newly hatched olive ridley sea turtle, Lepidochelys olivacea, which is known to have a highly variable horny shell. In total, 120 patterns of carapacial scutes and 10 patterns of scutes on plastron, differing in the number and position of scutes were found. The number of vertebral scutes varied from 4 to 10. Variations with five, six and seven vertebrals occurred with the greatest and nearly equally frequency (31.5% on average). Pleural scutes were from 5 to 10 at one or both sides, and the typical symmetric pattern for sea turtles with five pairs of pleurals was only seen in ca. 12% of specimens. In contrast, the majority of the specimens (92.7%) had just 13 pairs of marginals, showing a stable normal pattern. Similarly, on plastron the horny scutes were conservative, too; about 85% of specimens standardly had six pairs of plastral scutes and all specimens had four pairs of inframarginals. Despite a high level of variation of vertebral and pleural scutes in olive ridley turtle, all patterns fall into the theoretical spectrum of possible variants predicted by the segment-dependent model of development of the turtle horny shell. Therefore, the results of our analysis support the existence of direct morphogenetic correlation between the number and distribution of normal and supernumerary scutes and metamere organization of the turtle embryo.

Shell variability in the stem turtles Proterochersis spp

Background

Turtle shells tend to exhibit frequent and substantial variability, both in bone and scute layout. Aside from secondary changes, caused by diseases, parasites, and trauma, this variability appears to be inherent and result from stochastic or externally induced flaws of developmental programs. It is, thus, expected to be present in fossil turtle species at least as prominently, as in modern populations. Descriptions of variability and ontogeny are, however, rare for fossil turtles, mainly due to rarity, incompleteness, damage, and post-mortem deformation of their remains. This paper is an attempt at description and interpretation of external shell variability in representatives of the oldest true turtles, Proterochersis robusta and Proterochersis porebensis (Proterochersidae, the sister group to all other known testudinatans) from the Late Triassic (Norian) of Germany and Poland.

Methods

All the available shell remains of Proterochersis robusta (13 specimens) and Proterochersis porebensis (275 specimens) were studied morphologically in order to identify any ontogenetic changes, intraspecific variability, sexual dimorphism, and shell abnormalities. To test the inferred sexual dimorphism, shape analyses were performed for two regions (gular and anal) of the plastron.

Results

Proterochersis spp. exhibits large shell variability, and at least some of the observed changes seem to be correlated with ontogeny (growth of gulars, extragulars, caudals, and marginals, disappearance of middorsal keel on the carapace). Several specimens show abnormal layout of scute sulci, several others unusual morphologies of vertebral scute areas, one has an additional pair of plastral scutes, and one extraordinarily pronounced, likely pathological, growth rings on the carapace. Both species are represented in a wide spectrum of sizes, from hatchlings to old, mature individuals. The largest fragmentary specimens of Proterochersis porebensis allow estimation of its maximal carapace length at approximately 80 cm, while Proterochersis robusta appears to have reached lower maximal sizes.

Discussion

This is the second contribution describing variability among numerous specimens of Triassic turtles, and the first to show evidence of unambiguous shell abnormalities. Presented data supplement the sparse knowledge of shell scute development in the earliest turtles and suggest that at least some aspects of the developmental programs governing scute development were already similar in the Late Triassic to these of modern forms.

Analysis of morphological variability and heritability in the head of the Argentine Black and White Tegu (Salvator merianae): undisturbed vs. disturbed environments

The heterogeneity of biotic and abiotic factors influencing fitness produce selective pressures that promote local adaptation and divergence among different populations of the same species. In order for adaptations to be maintained through evolutionary time, heritable genetic variation controlling the expression of the morphological features under selection is necessary. Here we compare morphological shape variability and size of the cephalic region of Salvator merianae specimens from undisturbed environments to those of individuals from disturbed environments, and estimated heritability for shape and size using geometric morphometric and quantitative genetics tools. The results of these analyzes indicated that there are statistically significant differences in shape and size between populations from the two environments. Possibly, one of the main determinants of cephalic shape and size is adaptation to the characteristics of the environment and to the trophic niche. Individuals from disturbed environments have a cephalic region with less shape variation and also have a larger centroid size when compared to individuals from undisturbed environments. The high heritability values obtained for shape and size in dorsal view and right side view indicate that these phenotypic characters have a great capacity to respond to the selection pressures to which they are subjected. Data obtained here could be used as an important tool when establishing guidelines for plans for the sustainable use and conservation of S. merianae and other species living in disturbed areas.

The causes and ecological correlates of head scale asymmetry and fragmentation in a tropical snake

The challenge of identifying the proximate causes and ecological consequences of phenotypic variation can be facilitated by studying traits that are usually but not always bilaterally symmetrical; deviations from symmetry likely reflect disrupted embryogenesis. Based on a 19-year mark-recapture study of >1300 slatey-grey snakes (Stegonotus cucullatus) in tropical Australia, and incubation of >700 eggs, we document developmental and ecological correlates of two morphological traits: asymmetry and fragmentation of head scales. Asymmetry was directional (more scales on the left side) and was higher in individuals with lower heterozygosity, but was not heritable. In contrast, fragmentation was heritable and was higher in females than males. Both scale asymmetry and fragmentation were increased by rapid embryogenesis but were not affected by hydric conditions during incubation. Snakes with asymmetry and fragmentation exhibited slightly lower survival and increased (sex-specific) movements, and females with more scale fragmentation produced smaller eggs. Counterintuitively, snakes with more asymmetry had higher growth rates (possibly reflecting trade-offs with other traits), and snakes with more fragmentation had fewer parasites (possibly due to lower feeding rates). Our data paint an unusually detailed picture of the complex genetic and environmental factors that, by disrupting early embryonic development, generate variations in morphology that have detectable correlations with ecological performance.

Toxicological effects of polychlorinated biphenyls (PCBs) on freshwater turtles in the United States

Prediction of vertebrate health effects originating from persistent organic pollutants (POPs) such as polychlorinated biphenyls (PCBs) has remained a challenge for decades thus making the identification of bioindicators difficult. POPs are predominantly present in soil and sediment, where they adhere to particles due to their hydrophobic characteristics. Animals inhabiting soil and sediment can be exposed to PCBs via dermal exposure while others may obtain PCBs through contaminated trophic interaction. Freshwater turtles can serve as bioindicators due to their strong site fidelity, longevity and varied diet. Previous research observed the health effects of PCBs on turtles such as decreased bone mass, changed sexual development and decreased immune responses through studying both contaminated sites along with laboratory experimentation. Higher deformity rates in juveniles, increased mortality and slower growth have also been observed. Toxicological effects of PCBs vary between species of freshwater turtles and depend on the concertation and configuration of PCB congeners. Evaluation of ecotoxicological effects of PCBs in non-endangered turtles could provide important knowledge about the health effects of endangered turtle species thus inform the design of remediation strategies. In this review, the PCB presence in freshwater turtle habitats and the ecotoxicological effects were investigated with the aim of utilizing the health status to identify areas of focus for freshwater turtle conservation.

The integumental appendages of the turtle shell: an evo-devo perspective

The turtle shell is composed of dorsal armor (carapace) and ventral armor (plastron) covered by a keratinized epithelium. There are two epithelial appendages of the turtle shell: scutes (large epidermal shields separated by furrows and forming a unique mosaic) and tubercles (numerous small epidermal bumps located on the carapaces of some species). In our perspective, we take a synthetic, comparative approach to consider the homology and evolution of these integumental appendages. Scutes have been more intensively studied, as they are autapomorphic for turtles and can be diagnostic taxonomically. Their pattern of tessellation is stable phylogenetically, but labile in the individual. We discuss the history of developmental investigations of these structures and hypotheses of evolutionary and anomalous variation. In our estimation, the scutes of the turtle shell are an evolutionary novelty, whereas the tubercles found on the shells of some turtles are homologous to reptilian scales.

Out of Africa: did Emys orbicularis occidentalis cross the Strait of Gibraltar twice?

The narrow Strait of Gibraltar has separated the African and European continents since the Miocene (5.3 Mya), with a different degree of permeability for Mediterranean taxa. Southern and northern regions of the Iberian Peninsula and Morocco, respectively, are key areas to evaluate the colonization dynamics and biogeographic history of taxa occurring at both sides of this strait. The Ibero-Maghrebian subspecies of the European pond turtle, Emys orbicularis occidentalis, is patchily distributed and threatened throughout most of the Iberian Peninsula and northern Morocco and its origin is thought to be in North Africa. Here we expand the geographic sampling across the Iberian Peninsula and Morocco, with special emphasis in the southern tip of the peninsula and northern Morocco, and analyze mtDNA sequences of 183 E. o. occidentalis to better understand the complex biogeographic history of this subspecies. We provide for the first time evidence for shared haplotypes of Iberian and North African pond turtles, with an additional haplotype in the southern Iberian Peninsula derived from Moroccan haplotypes. This supports the hypothesis that the Strait of Gibraltar constitutes no significant biogeographic barrier for E. orbicularis. However, the newly discovered shared, or extremely similar, haplotypes of European pond turtles from the southern Iberian Peninsula and Morocco suggest either that at least two independent natural colonization waves from Morocco have reached the Iberian Peninsula or that Moroccan turtles were accidentally or deliberately introduced there.

Conservation genetics of the endangered Spotted Turtle (Clemmys guttata) illustrate the risks of “bottleneck tests”

Studies of population genetics in turtles have suggested that turtles do not experience genetic impacts of bottlenecks as strongly as expected. However, recent studies cast doubt on two commonly used tests implemented in the program BOTTLENECK, suggesting that these findings should be re-evaluated. The Spotted Turtle (Clemmys guttata (Schneider, 1792)) is endangered both globally and within Canada, but genetic data required to develop effective recovery strategies are unavailable. Here, we conducted the first study of population genetic structure in C. guttata. We then used multiple small populations of C. guttata as replicates to test whether the commonly used program BOTTLENECK could detect the genetic signature of bottlenecks in our study populations, which are all thought to have experienced significant declines in the past 2–3 generations (75 years). Turtles (n = 256) were genotyped at 11 microsatellite loci. A suite of Bayesian population genetics analyses and a principal coordinates analysis identified a minimum of 6 distinct genetic populations and a maximum of 10 differentiated subpopulations across the sampled Canadian range of C. guttata, which corresponded to demographically independent units. BOTTLENECK failed to detect population declines. A literature review found that bottleneck tests in 17 of 18 previous genetic studies of tortoises and freshwater turtles were based on suboptimal sampling, potentially confounding their results. High retention of genetic diversity (allelic richness and heterozygosity) in isolated populations of C. guttata and other turtle species is encouraging for species recovery, but conclusions about the prevalence of genetic bottlenecks in such populations should be re-examined.

Accumulation of trace metals in the embryos and hatchlings of Chelonia mydas from Peninsular Malaysia incubated at different temperatures

A variety of trace metals were measured in the egg contents of three clutches of Chelonia mydas collected from Kuala Terengganu state in Peninsular Malaysia. We quantified Mn, Cu, Zn, Se (essential trace metals) and As (anthropogenic pollutant) at several developmental stages obtained by incubating eggs at two different temperatures (27 °C and 31 °C). The incubation temperatures were chosen because they produce predominantly male or predominantly female hatchlings, respectively. The eggs were removed from the sand and washed before being placed in incubators, to ensure that the only possible source of the detected metals was maternal transfer. Other metals: Mo, Co, Ni, Cd, Sn, Sb, Hg, Tl and Pb (all non-essential metals) were detected at concentrations below the lower limit of quantitation (LLOQ). Trace metal concentrations, particularly [Zn], increased during development, other metals (Cu, As, Se and Cr) accumulated to a lesser degree than zinc but no significant differences were observed between the incubation temperatures at any stage of incubation. To date, only a few studies on trace metals in turtle embryos and hatchlings have been reported; this study will provide basic knowledge on the accumulation of trace metals during development at two different incubation temperatures.