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Adeosun WB, Loots DT. Medicinal Plants against Viral Infections: A Review of Metabolomics Evidence for the Antiviral Properties and Potentials in Plant Sources. Viruses 2024; 16:218. [PMID: 38399995 PMCID: PMC10892737 DOI: 10.3390/v16020218] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2023] [Revised: 01/22/2024] [Accepted: 01/29/2024] [Indexed: 02/25/2024] Open
Abstract
Most plants have developed unique mechanisms to cope with harsh environmental conditions to compensate for their lack of mobility. A key part of their coping mechanisms is the synthesis of secondary metabolites. In addition to their role in plants' defense against pathogens, they also possess therapeutic properties against diseases, and their use by humans predates written history. Viruses are a unique class of submicroscopic agents, incapable of independent existence outside a living host. Pathogenic viruses continue to pose a significant threat to global health, leading to innumerable fatalities on a yearly basis. The use of medicinal plants as a natural source of antiviral agents has been widely reported in literature in the past decades. Metabolomics is a powerful research tool for the identification of plant metabolites with antiviral potentials. It can be used to isolate compounds with antiviral capacities in plants and study the biosynthetic pathways involved in viral disease progression. This review discusses the use of medicinal plants as antiviral agents, with a special focus on the metabolomics evidence supporting their efficacy. Suggestions are made for the optimization of various metabolomics methods of characterizing the bioactive compounds in plants and subsequently understanding the mechanisms of their operation.
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Affiliation(s)
- Wilson Bamise Adeosun
- Human Metabolomics, North-West University, Private Bag X6001, Box 269, Potchefstroom 2531, South Africa;
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Identification of phytolaccosides in biological samples from pokeweed intoxication patients using liquid chromatography-tandem mass spectrometry. J Chromatogr B Analyt Technol Biomed Life Sci 2020; 1149:122123. [DOI: 10.1016/j.jchromb.2020.122123] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2019] [Revised: 04/07/2020] [Accepted: 04/19/2020] [Indexed: 11/18/2022]
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Zaynab M, Fatima M, Sharif Y, Zafar MH, Ali H, Khan KA. Role of primary metabolites in plant defense against pathogens. Microb Pathog 2019; 137:103728. [PMID: 31499183 DOI: 10.1016/j.micpath.2019.103728] [Citation(s) in RCA: 39] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2019] [Revised: 09/05/2019] [Accepted: 09/06/2019] [Indexed: 10/26/2022]
Abstract
Plants under natural environment facing various pathogens, tend to produce defense to maintain their fitness and minimize pathogenic damage. Plant-pathogens interaction is gaining more importance by researches as, their means of the fight are primary metabolites. The ultimate result of either means of defense is pathogenesis or resistance. Plant defense mechanisms can be grouped either into inducible and constitutive defense or chemical, structural and morphological defense. Majority of defense mechanisms have a passive role, i.e. only defensive against pathogens, but a few are very active. Plant primary metabolites are catching interest in their immunity role. Deep information of molecular mechanisms involved during the plant-pathogen system is need of the day for future disease control. This review will highlight the role of primary metabolites and their mechanism of action in plant defense.
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Affiliation(s)
- Madiha Zaynab
- College of Life Science Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China.
| | - Mahpara Fatima
- College of Crop Science Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China
| | - Yasir Sharif
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, 350002, PR China
| | - Muhammad Hammad Zafar
- Institute of Animal and Dairy Sciences University of Agriculture Faisalabad, Pakistan
| | - Habib Ali
- Department of Entomology, University of Agriculture Faisalabad, Depalpur Campus, Okara, Pakistan
| | - Khalid Ali Khan
- Research Center for Advanced Materials Science (RCAMS), King Khalid University, P.O. Box 9004, Abha, 61413, Saudi Arabia; Unit of Bee Research and Honey Production, Faculty of Science, King Khalid University, P.O. Box 9004, Abha, 61413, Saudi Arabia; Biology Department, Faculty of Science, King Khalid University, P.O. Box 9004, Abha, 61413, Saudi Arabia
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Case report on recovery from Japanese encephalitis virus infection by complementary use of phytolacca-mother tincture and in silico analysis. J Herb Med 2018. [DOI: 10.1016/j.hermed.2018.10.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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Islam W, Adnan M, Tayyab M, Hussain M, Islam SU. Phyto-metabolites; An Impregnable Shield against Plant Viruses. Nat Prod Commun 2018. [DOI: 10.1177/1934578x1801300131] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022] Open
Abstract
Worldwide, economically important crops are under continuous threat from plant viruses as they reproduce within the host and spread via various biological and non biological means. The problem can be minimized via application of integrated management approaches involving utilization of resistant genotypes and reducing the insect vector population. But such strategies are rarely applied in developing countries and farmers prefer to use chemicals against all type of diseases. But increasing use of pesticides is a leading cause of disaster to our ecosystem so alternative means such as phyto-metabolites should be explored for eco friendly management of plant viruses. So here we have reviewed about different phyto-metabolites that can be effectively and potentially used against various plant virus diseases. We further explained about the various primary and secondary metabolites such as alkaloids, essential oils, flavonoids, polysaccharides and proteins. The review highlights the recent advances in the field of phyto-metabolites utilization against plant viruses and sums up via hoping through prospects that future drugs will be safer for human beings and our ecosystem.
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Affiliation(s)
- Waqar Islam
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
- Fujian Province Key Laboratory for Plant Viruses, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Muhammad Adnan
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Muhammad Tayyab
- College of Crop Sciences, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Mubasher Hussain
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
- College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
| | - Saif Ul Islam
- College of Plant Protection, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
- Fujian Province Key Laboratory for Plant Viruses, Institute of Plant Virology, Fujian Agriculture and Forestry University, Fuzhou, Fujian 350002, China
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Expression of an RNA glycosidase inhibits HIV-1 transactivation of transcription. Biochem J 2017; 474:3471-3483. [PMID: 28864671 DOI: 10.1042/bcj20170353] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2017] [Revised: 08/24/2017] [Accepted: 08/30/2017] [Indexed: 11/17/2022]
Abstract
HIV-1 (human immunodeficiency virus) transcription is primarily controlled by the virally encoded Tat (transactivator of transcription) protein and its interaction with the viral TAR (transcription response element) RNA element. Specifically, binding of a Tat-containing complex to TAR recruits cellular factors that promote elongation of the host RNA polymerase engaging the viral DNA template. Disruption of this interaction halts viral RNA transcription. In the present study, we investigated the effect of pokeweed antiviral protein (PAP), an RNA glycosidase (EC#: 3.2.2.22) synthesized by the pokeweed plant (Phytolacca americana), on transcription of HIV-1 mRNA. We show that co-expression of PAP with a proviral clone in culture cells resulted in a Tat-dependent decrease in viral mRNA levels. PAP reduced HIV-1 transcriptional activity by inhibiting Tat protein synthesis. The effects of PAP expression on host factors AP-1 (activator protein 1), NF-κB (nuclear factor kappa-light-chain-enhancer of activated B-cells) and specificity protein 1, which modulate HIV-1 transcription by binding to the viral LTR (5'-long terminal repeat), were also investigated. Only AP-1 showed a modest JNK pathway-dependent increase in activity in the presence of PAP; however, this activation was not sufficient to significantly enhance transcription from a partial viral LTR containing AP-1 binding sites. Therefore, the primary effect of PAP on HIV-1 transcription is to reduce viral RNA synthesis by decreasing the abundance of Tat. These findings provide a mechanistic explanation for the observed decrease in viral RNAs in cells expressing PAP and contribute to our understanding of the antiviral effects of this plant protein.
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Ajji PK, Walder K, Puri M. Functional Analysis of a Type-I Ribosome Inactivating Protein Balsamin from Momordica balsamina with Anti-Microbial and DNase Activity. PLANT FOODS FOR HUMAN NUTRITION (DORDRECHT, NETHERLANDS) 2016; 71:265-71. [PMID: 27319013 DOI: 10.1007/s11130-016-0555-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Ribosome inactivating proteins (RIPs) have received considerable attention in biomedical research because of their unique activities towards tumor and virus-infected cells. We extracted balsamin, a type-I RIP, from Momordica balsamina. In the present study, a detailed investigation on DNase activity, antioxidant capacity and antibacterial activity was conducted using purified balsamin. DNase-like activity of balsamin towards plasmid DNA was pH, incubation time and temperature dependent. Moreover, the presence of Mg(2+) (10-50 mM) influenced the DNA cleavage activity. Balsamin also demonstrated reducing power and a capacity to scavenge free radicals in a dose dependent manner. Furthermore, the protein exhibited antibacterial activity against Staphylococcus aureus, Salmonella enterica, Staphylococcus epidermidis and Escherichia coli, which suggests potential utility of balsamin as a nutraceutical.
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Affiliation(s)
- Parminder Kaur Ajji
- Bioprocessing Laboratory, Centre for Chemistry and Biotechnology, School of Life and Environment Sciences, Deakin University, 75 Pigdons Road, Waurn Ponds, Geelong, 3220, Victoria, Australia
- Metabolic Research Unit, School of Medicine, Deakin University, Waurn Ponds, 75 Pigdons Road, Locked Bag 20000, Geelong, VIC, 3220, Australia
| | - Ken Walder
- Metabolic Research Unit, School of Medicine, Deakin University, Waurn Ponds, 75 Pigdons Road, Locked Bag 20000, Geelong, VIC, 3220, Australia
| | - Munish Puri
- Bioprocessing Laboratory, Centre for Chemistry and Biotechnology, School of Life and Environment Sciences, Deakin University, 75 Pigdons Road, Waurn Ponds, Geelong, 3220, Victoria, Australia.
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Krivdova G, Hudak KA. Pokeweed antiviral protein restores levels of cellular APOBEC3G during HIV-1 infection by depurinating Vif mRNA. Antiviral Res 2015; 122:51-4. [PMID: 26275799 DOI: 10.1016/j.antiviral.2015.08.007] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/19/2015] [Revised: 08/08/2015] [Accepted: 08/09/2015] [Indexed: 11/19/2022]
Abstract
Pokeweed antiviral protein (PAP) is an RNA glycosidase that inhibits production of human immunodeficiency virus type 1 (HIV-1) when expressed in human culture cells. Previously, we showed that the expression of PAP reduced the levels of several viral proteins, including virion infectivity factor (Vif). However, the mechanism causing Vif reduction and the consequences of the inhibition were not determined. Here we show that the Vif mRNA is directly depurinated by PAP. Because of depurination at two specific sites within the Vif ORF, Vif levels decrease during infections and the progeny viruses that are generated are ∼ 10-fold less infectious and compromised for proviral integration. These results are consistent with PAP activity inhibiting translation of Vif, which in turn reduces the effect of Vif to inactivate the host restriction factor APOBEC3G (apolipoprotein B mRNA-editing enzyme, catalytic polypeptide-like editing complex 3G). Our findings identify Vif mRNA as a new substrate for PAP and demonstrate that derepression of innate immunity against HIV-1 contributes to its antiviral activity.
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Affiliation(s)
| | - Katalin A Hudak
- Department of Biology, York University, Toronto, Ontario, Canada.
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Zhabokritsky A, Mansouri S, Hudak KA. Pokeweed antiviral protein alters splicing of HIV-1 RNAs, resulting in reduced virus production. RNA (NEW YORK, N.Y.) 2014; 20:1238-1247. [PMID: 24951553 PMCID: PMC4105749 DOI: 10.1261/rna.043141.113] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2013] [Accepted: 05/06/2014] [Indexed: 06/03/2023]
Abstract
Processing of HIV-1 transcripts results in three populations in the cytoplasm of infected cells: full-length RNA, singly spliced, and multiply spliced RNAs. Rev, regulator of virion expression, is an essential regulatory protein of HIV-1 required for transporting unspliced and singly spliced viral transcripts from the nucleus to the cytoplasm. Export allows these RNAs to be translated and the full-length RNA to be packaged into virus particles. In our study, we investigate the activity of pokeweed antiviral protein (PAP), a glycosidase isolated from the pokeweed plant Phytolacca americana, on the processing of viral RNAs. We show that coexpression of PAP with a proviral clone alters the splicing ratio of HIV-1 RNAs. Specifically, PAP causes the accumulation of multiply spliced 2-kb RNAs at the expense of full-length 9-kb and singly spliced 4-kb RNAs. The change in splicing ratio is due to a decrease in activity of Rev. We show that PAP depurinates the rev open reading frame and that this damage to the viral RNA inhibits its translation. By decreasing Rev expression, PAP indirectly reduces the availability of full-length 9-kb RNA for packaging and translation of the encoded structural proteins required for synthesis of viral particles. The decline we observe in virus protein expression is not due to cellular toxicity as PAP did not diminish translation rate. Our results describing the reduced activity of a regulatory protein of HIV-1, with resulting change in virus mRNA ratios, provides new insight into the antiviral mechanism of PAP.
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Affiliation(s)
- Alice Zhabokritsky
- Department of Biology, York University, Toronto, Ontario M3J 1P3, Canada
| | - Sheila Mansouri
- Department of Biology, York University, Toronto, Ontario M3J 1P3, Canada
| | - Katalin A Hudak
- Department of Biology, York University, Toronto, Ontario M3J 1P3, Canada
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Shi PL, Binnington B, Sakac D, Katsman Y, Ramkumar S, Gariepy J, Kim M, Branch DR, Lingwood C. Verotoxin A subunit protects lymphocytes and T cell lines against X4 HIV infection in vitro. Toxins (Basel) 2012; 4:1517-34. [PMID: 23242319 PMCID: PMC3528260 DOI: 10.3390/toxins4121517] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2012] [Revised: 11/24/2012] [Accepted: 12/06/2012] [Indexed: 11/23/2022] Open
Abstract
Our previous genetic, pharmacological and analogue protection studies identified the glycosphingolipid, Gb3 (globotriaosylceramide, Pk blood group antigen) as a natural resistance factor for HIV infection. Gb3 is a B cell marker (CD77), but a fraction of activated peripheral blood mononuclear cells (PBMCs) can also express Gb3. Activated PBMCs predominantly comprise CD4+ T-cells, the primary HIV infection target. Gb3 is the sole receptor for Escherichia coli verotoxins (VTs, Shiga toxins). VT1 contains a ribosome inactivating A subunit (VT1A) non-covalently associated with five smaller receptor-binding B subunits. The effect of VT on PHA/IL2-activated PBMC HIV susceptibility was determined. Following VT1 (or VT2) PBMC treatment during IL2/PHA activation, the small Gb3+/CD4+ T-cell subset was eliminated but, surprisingly, remaining CD4+ T-cell HIV-1IIIB (and HIV-1Ba-L) susceptibility was significantly reduced. The Gb3-Jurkat T-cell line was similarly protected by brief VT exposure prior to HIV-1IIIB infection. The efficacy of the VT1A subunit alone confirmed receptor independent protection. VT1 showed no binding or obvious Jurkat cell/PBMC effect. Protective VT1 concentrations reduced PBMC (but not Jurkat cell) proliferation by 50%. This may relate to the mechanism of action since HIV replication requires primary T-cell proliferation. Microarray analysis of VT1A-treated PBMCs indicated up regulation of 30 genes. Three of the top four were histone genes, suggesting HIV protection via reduced gene activation. VT blocked HDAC inhibitor enhancement of HIV infection, consistent with a histone-mediated mechanism. We speculate that VT1A may provide a benign approach to reduction of (X4 or R5) HIV cell susceptibility.
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Affiliation(s)
- Pei Lin Shi
- Department of Biochemistry, University of Toronto, Ontario M5G 1X8, Canada; E-Mail:
- Division of Molecular Structure and Function and Research Institute, The Hospital for Sick Children, Ontario M5G 1X8, Canada; E-Mail:
| | - Beth Binnington
- Division of Molecular Structure and Function and Research Institute, The Hospital for Sick Children, Ontario M5G 1X8, Canada; E-Mail:
| | - Darinka Sakac
- Canadian Blood Services, Toronto, Ontario M5G 2M1, Canada; E-Mails: (D.S.); (Y.K.)
| | - Yulia Katsman
- Canadian Blood Services, Toronto, Ontario M5G 2M1, Canada; E-Mails: (D.S.); (Y.K.)
| | - Stephanie Ramkumar
- Laboratory Medicine & Pathology, University of Toronto, Ontario M5G 1X8, Canada; E-Mails: (S.R.); (M.K.); (D.R.B.)
| | - Jean Gariepy
- Department of Medical Biophysics & Pharmaceutical Sciences, University of Toronto, Ontario M5G 1X8, Canada; E-Mail:
- Sunnybrook Research Institute, Sunnybrook Health Science Centre, Toronto M4N 3M5, Canada
| | - Minji Kim
- Canadian Blood Services, Toronto, Ontario M5G 2M1, Canada; E-Mails: (D.S.); (Y.K.)
- Laboratory Medicine & Pathology, University of Toronto, Ontario M5G 1X8, Canada; E-Mails: (S.R.); (M.K.); (D.R.B.)
| | - Donald R. Branch
- Canadian Blood Services, Toronto, Ontario M5G 2M1, Canada; E-Mails: (D.S.); (Y.K.)
- Laboratory Medicine & Pathology, University of Toronto, Ontario M5G 1X8, Canada; E-Mails: (S.R.); (M.K.); (D.R.B.)
- Department of Medicine, University of Toronto, Ontario M5G 1X8, Canada
- Division of Cell and Molecular Biology, Toronto General Research Institute of the University Health Network, Toronto, Ontario M5G 2M9, Canada
| | - Clifford Lingwood
- Department of Biochemistry, University of Toronto, Ontario M5G 1X8, Canada; E-Mail:
- Division of Molecular Structure and Function and Research Institute, The Hospital for Sick Children, Ontario M5G 1X8, Canada; E-Mail:
- Laboratory Medicine & Pathology, University of Toronto, Ontario M5G 1X8, Canada; E-Mails: (S.R.); (M.K.); (D.R.B.)
- Author to whom correspondence should be addressed; E-Mail: ; Tel.: +1-416-813-5998; Fax: +1-416-813-5993
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Mehta HV, Jones PH, Weiss JP, Okeoma CM. IFN-α and lipopolysaccharide upregulate APOBEC3 mRNA through different signaling pathways. THE JOURNAL OF IMMUNOLOGY 2012; 189:4088-103. [PMID: 22972924 DOI: 10.4049/jimmunol.1200777] [Citation(s) in RCA: 38] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
Abstract
APOBEC3 (A3) proteins are virus-restriction factors that provide intrinsic immunity against infections by viruses like HIV-1 and mouse mammary tumor virus. A3 proteins are inducible by inflammatory stimuli, such as LPS and IFN-α, via mechanisms that are not fully defined. Using genetic and pharmacological studies on C57BL/6 mice and cells, we show that IFN-α and LPS induce A3 via different pathways, independently of each other. IFN-α positively regulates mouse APOBEC3 (mA3) mRNA expression through IFN-αR/PKC/STAT1 and negatively regulates mA3 mRNA expression via IFN-αR/MAPKs-signaling pathways. Interestingly, LPS shows some variation in its regulatory behavior. Although LPS-mediated positive regulation of mA3 mRNA occurs through TLR4/TRIF/IRF3/PKC, it negatively modulates mA3 mRNA via TLR4/MyD88/MAPK-signaling pathways. Additional studies on human peripheral blood mononuclear cells reveal that PKC differentially regulates IFN-α and LPS induction of human A3A, A3F, and A3G mRNA expression. In summary, we identified important signaling targets downstream of IFN-αR and TLR4 that mediate A3 mRNA induction by both LPS and IFN-α. Our results provide new insights into the signaling targets that could be manipulated to enhance the intracellular store of A3 and potentially enhance A3 antiviral function in the host.
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Affiliation(s)
- Harshini V Mehta
- Department of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA 52242, USA
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