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Zarei M, Jahed M, Dezfouli MP, Daliri MR. Sensory representation of visual stimuli in the coupling of low-frequency phase to spike times. Brain Struct Funct 2022; 227:1641-1654. [PMID: 35106628 DOI: 10.1007/s00429-022-02460-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Accepted: 01/03/2022] [Indexed: 11/30/2022]
Abstract
Neural synchronization has been engaged in several brain mechanisms. Previous studies have shown that the interaction between the time of spiking activity and phase of local field potentials (LFPs) plays a key role in many cognitive functions. However, the potential role of this spike-LFP phase coupling (SPC) in neural coding is not fully understood. Here, we sought to investigate the role of this SPC for encoding the sensory properties of visual stimuli. To this end, we measured SPC strength in the preferred and anti-preferred motion directions of stimulus presented inside the receptive field of middle temporal (MT) neurons. We found a selective response in terms of SPC strength for different directions of motion. Remarkably, this selective function is inverted with respect to the spiking activity. In other words, the least SPC occurs for the preferred direction (based on the spike rate), and vice versa; the strongest SPC is induced in the anti-preferred direction. Altogether, these findings imply that the neural system may use spike-LFP phase coupling in the primate visual cortex to encode sensory information.
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Affiliation(s)
- Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mehran Jahed
- School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran.
| | - Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran
| | - Mohammad Reza Daliri
- Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
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2
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Parto Dezfouli M, Zarei M, Constantinidis C, Daliri MR. Task-specific modulation of PFC activity for matching-rule governed decision-making. Brain Struct Funct 2021; 226:443-455. [PMID: 33398431 DOI: 10.1007/s00429-020-02191-7] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2020] [Accepted: 11/27/2020] [Indexed: 01/08/2023]
Abstract
Storing information from incoming stimuli in working memory (WM) is essential for decision-making. The prefrontal cortex (PFC) plays a key role to support this process. Previous studies have characterized different neuronal populations in the PFC for working memory judgements based on whether an originally presented stimulus matches a subsequently presented one (matching-rule decision-making). However, much remains to be understood about this mechanism at the population level of PFC neurons. Here, we hypothesized differences in processing of feature vs. spatial WM within the PFC during a matching-rule decision-making task. To test this hypothesis, the modulation of neural activity within the PFC during two types of decision-making tasks (spatial WM and feature WM) in comparison to a passive fixation task was determined. We discovered that neural population-level activity within the PFC is different for the match vs. non-match condition exclusively in the case of the feature-specific decision-making task. For this task, the non-match condition exhibited a greater firing rate and lower trial-to-trial variability in spike count compared to the feature-match condition. Furthermore, the feature-match condition exhibited lower variability compared to the spatial-match condition. This was accompanied by a faster behavioral response time for the feature-match compared to the spatial-match WM task. We attribute this lower across-trial spiking variability and behavioral response time to a higher task-relevant attentional level in the feature WM compared to the spatial WM task. The findings support our hypothesis for task-specific differences in the processing of feature vs. spatial WM within the PFC. This also confirms the general conclusion that PFC neurons play an important role during the process of matching-rule governed decision-making.
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Affiliation(s)
- Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran. .,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran.
| | - Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Christos Constantinidis
- Department of Neurobiology and Anatomy, Wake Forest School of Medicine, Winston-Salem, NC, 27157, USA
| | - Mohammad Reza Daliri
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran. .,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran.
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3
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Zarei M, Parto Dezfouli M, Jahed M, Daliri MR. Adaptation Modulates Spike-Phase Coupling Tuning Curve in the Rat Primary Auditory Cortex. Front Syst Neurosci 2020; 14:55. [PMID: 32848646 PMCID: PMC7416672 DOI: 10.3389/fnsys.2020.00055] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2020] [Accepted: 07/13/2020] [Indexed: 12/02/2022] Open
Abstract
Adaptation is an important mechanism that causes a decrease in the neural response both in terms of local field potentials (LFP) and spiking activity. We previously showed this reduction effect in the tuning curve of the primary auditory cortex. Moreover, we revealed that a repeated stimulus reduces the neural response in terms of spike-phase coupling (SPC). In the current study, we examined the effect of adaptation on the SPC tuning curve. To this end, employing the phase-locking value (PLV) method, we estimated the spike-LFP coupling. The data was obtained by a simultaneous recording from four single-electrodes in the primary auditory cortex of 15 rats. We first investigated whether the neural system may use spike-LFP phase coupling in the primary auditory cortex to encode sensory information. Secondly, we investigated the effect of adaptation on this potential SPC tuning. Our data showed that the coupling between spikes’ times and the LFP phase in beta oscillations represents sensory information (different stimulus frequencies), with an inverted bell-shaped tuning curve. Furthermore, we showed that adaptation to a specific frequency modulates SPC tuning curve of the adapter and its neighboring frequencies. These findings could be useful for interpretation of feature representation in terms of SPC and the underlying neural mechanism of adaptation.
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Affiliation(s)
- Mohammad Zarei
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mohsen Parto Dezfouli
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
| | - Mehran Jahed
- School of Electrical Engineering, Sharif University of Technology (SUT), Tehran, Iran
| | - Mohammad Reza Daliri
- School of Cognitive Sciences (SCS), Institute for Research in Fundamental Sciences (IPM), Tehran, Iran.,Neuroscience and Neuroengineering Research Laboratory, Department of Biomedical Engineering, School of Electrical Engineering, Iran University of Science and Technology (IUST), Tehran, Iran
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Farakhor S, Shalchyan V, Daliri MR. Adaptation effects of medial forebrain bundle micro-electrical stimulation. Bioengineered 2019; 10:78-86. [PMID: 30916601 PMCID: PMC6527058 DOI: 10.1080/21655979.2019.1599628] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
Abstract
Brain micro-electrical stimulation and its applications are among the most important issues in the field of brain science and neurophysiology. Deep brain stimulation techniques have been used in different theraputic or alternative medicine applications including chronic pain control, tremor control, Parkinson’s disease control and depression control. Recently, brain electrical stimulation has been used for tele-control and navigation of small animals such as rodents and birds. Electrical stimulation of the medial forebrain bundle (MFB) area has been reported to induce a pleasure sensation in rat which can be used as a virtual reward for rat navigation. In all cases of electrical stimulation, the temporal adaptation may deteriorate the instantaneous effects of the stimulation. Here, we study the adaptation effects of the MFB electrical stimulation in rats. The animals are taught to press a key in an operant conditioning chamber to self-stimulate the MFB region and receive a virtual reward for each key press. Based on the number of key presses, and statistical analyses the effects of adaptation on MFB stimulation is evaluated. The stimulation frequency were changed from 100 to 400 Hz, the amplitude were changed from 50 to 170 µA and the pulse-width were changed from 180 to 2000 µs. In the frequency of 250 Hz the adaptation effect were observed. The amplitude did not show a significant effect on MFB adaptation. For all values of pulse-widths, the adaptation occurred over two consecutive days, meaning that the number of key presses on the second day was less than the first day.
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Affiliation(s)
- Sepideh Farakhor
- a Neuroscience & Neuroengineering Research Lab., Biomedical Engineering Department , School of Electrical Engineering, Iran University of Science and Technology (IUST) , Tehran , Iran
| | - Vahid Shalchyan
- a Neuroscience & Neuroengineering Research Lab., Biomedical Engineering Department , School of Electrical Engineering, Iran University of Science and Technology (IUST) , Tehran , Iran
| | - Mohammad Reza Daliri
- a Neuroscience & Neuroengineering Research Lab., Biomedical Engineering Department , School of Electrical Engineering, Iran University of Science and Technology (IUST) , Tehran , Iran
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Demarchi G, Sanchez G, Weisz N. Automatic and feature-specific prediction-related neural activity in the human auditory system. Nat Commun 2019; 10:3440. [PMID: 31371713 PMCID: PMC6672009 DOI: 10.1038/s41467-019-11440-1] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2018] [Accepted: 07/11/2019] [Indexed: 12/04/2022] Open
Abstract
Prior experience enables the formation of expectations of upcoming sensory events. However, in the auditory modality, it is not known whether prediction-related neural signals carry feature-specific information. Here, using magnetoencephalography (MEG), we examined whether predictions of future auditory stimuli carry tonotopic specific information. Participants passively listened to sound sequences of four carrier frequencies (tones) with a fixed presentation rate, ensuring strong temporal expectations of when the next stimulus would occur. Expectation of which frequency would occur was parametrically modulated across the sequences, and sounds were occasionally omitted. We show that increasing the regularity of the sequence boosts carrier-frequency-specific neural activity patterns during both the anticipatory and omission periods, indicating that prediction-related neural activity is indeed feature-specific. Our results illustrate that even without bottom-up input, auditory predictions can activate tonotopically specific templates. After listening to a predictable sequence of sounds, we can anticipate and predict the next sound in the sequence. Here, the authors show that during expectation of a sound, the brain generates neural activity matching that which is produced by actually hearing the same sound.
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Affiliation(s)
- Gianpaolo Demarchi
- Centre for Cognitive Neuroscience and Division of Physiological Psychology, University of Salzburg, Hellbrunnerstraße 34, 5020, Salzburg, Austria.
| | - Gaëtan Sanchez
- Centre for Cognitive Neuroscience and Division of Physiological Psychology, University of Salzburg, Hellbrunnerstraße 34, 5020, Salzburg, Austria.,Lyon Neuroscience Research Center, Brain Dynamics and Cognition Team, INSERM UMRS 1028, CNRS UMR 5292, Université Claude Bernard Lyon 1, Université de Lyon, F-69000, Lyon, France
| | - Nathan Weisz
- Centre for Cognitive Neuroscience and Division of Physiological Psychology, University of Salzburg, Hellbrunnerstraße 34, 5020, Salzburg, Austria
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Single-Trial Decoding from Local Field Potential Using Bag of Word Representation. Brain Topogr 2019; 33:10-21. [PMID: 31363879 DOI: 10.1007/s10548-019-00726-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2018] [Accepted: 07/25/2019] [Indexed: 10/26/2022]
Abstract
Neural decoding allows us to study the brain functions by investigating the relationship between a stimulus and the corresponding response. Recently, the local field potential (LFP) has been targeted as a hallmark of brain activity for neural decoding. Despite several decoding methods, there is still a lack of a comprehensive framework to decode cognitive functions in an integrated structure. Here, we addressed this issue by developing a dictionary-based method to represent the LFP signals via a bag-of-words (BOW) approach. First, we defined a general dictionary consisting of various Gabor wavelets as the words which enabled us to represent LFPs in word domain. For each trial, the LFP signal was convolved with the dictionary words. The integral of the absolute value and the mean phase of the complex output were considered as histogram weights. In the next step, using cross-validation leave-one-out method, the trials were split into the training and test sets. The weights of each individual word were swapped across trials within a certain category of the training set while the sequential order was maintained. Finally, the test trial was classified using label voting in the k-nearest training trials. We conducted the proposed method on two independent LFP data sets, recorded from the rat primary auditory cortex (A1) and monkey middle temporal area in order to evaluate its efficiency. In addition to the chance level, the proposed method was compared with a standard BOW approach that has been extended recently for biomedical signals classification. Results show a high efficiency (~ 15% improvement in decoding accuracy) of the proposed method. Together, the aforementioned method provides a comprehensive framework for single-trial decoding from short-length electrophysiological signals.
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Parto Dezfouli M, Zarei M, Jahed M, Daliri MR. Stimulus-Specific Adaptation Decreases the Coupling of Spikes to LFP Phase. Front Neural Circuits 2019; 13:44. [PMID: 31333419 PMCID: PMC6616079 DOI: 10.3389/fncir.2019.00044] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2019] [Accepted: 06/18/2019] [Indexed: 11/19/2022] Open
Abstract
Stimulus repetition suppresses the neural activity in different sensory areas of the brain. This mechanism of so-called stimulus-specific adaptation (SSA) has been observed in both spiking activity and local field potential (LFP) responses. However, much remains to be known about the effect of SSA on the spike–LFP relation. In this study, we approached this issue by investigating the spike-phase coupling (SPC) in control and adapting paradigms. For the control paradigm, pure tones were presented in a random unbiased sequence. In the adapting paradigm, the same stimuli were presented in a random pattern but it was biased to an adapter stimulus. In fact, the adapter occupied 80% of the adapting sequence. During the tasks, LFP and multi-unit activity were recorded simultaneously from the primary auditory cortex of 15 anesthetized rats. To clarify the effect of adaptation on the relation between spike and LFP responses, the SPC of the adapter stimulus in these two paradigms was evaluated. Here, we employed phase locking value method for calculating the SPC. Our data show a strong coupling of spikes to LFP phase most prominently in beta band. This coupling was observed to decrease in the adapting condition compared to the control one. Importantly, we found that adaptation reduces spikes dominantly from the preferred phase of LFP in which spikes are more likely to be present there. As a result, the preferred phase of LFP may play a key role in coordinating neuronal spiking activity in neural adaptation mechanism. This finding is important for interpretation of the underlying neural mechanism of adaptation and also can be used in the context of the network and related connectivity models.
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Affiliation(s)
- Mohsen Parto Dezfouli
- Neuroscience and Neuroengineering Research Laboratory, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
| | - Mohammad Zarei
- Department of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Mehran Jahed
- Department of Electrical Engineering, Sharif University of Technology, Tehran, Iran
| | - Mohammad Reza Daliri
- Neuroscience and Neuroengineering Research Laboratory, Biomedical Engineering Department, School of Electrical Engineering, Iran University of Science and Technology, Tehran, Iran
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Abstract
Most behaviors in mammals are directly or indirectly guided by prior experience and therefore depend on the ability of our brains to form memories. The ability to form an association between an initially possibly neutral sensory stimulus and its behavioral relevance is essential for our ability to navigate in a changing environment. The formation of a memory is a complex process involving many areas of the brain. In this chapter we review classic and recent work that has shed light on the specific contribution of sensory cortical areas to the formation of associative memories. We discuss synaptic and circuit mechanisms that mediate plastic adaptations of functional properties in individual neurons as well as larger neuronal populations forming topographically organized representations. Furthermore, we describe commonly used behavioral paradigms that are used to study the mechanisms of memory formation. We focus on the auditory modality that is receiving increasing attention for the study of associative memory in rodent model systems. We argue that sensory cortical areas may play an important role for the memory-dependent categorical recognition of previously encountered sensory stimuli.
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Affiliation(s)
- Dominik Aschauer
- Institute of Physiology, Focus Program Translational Neurosciences (FTN), University Medical Center, Johannes Gutenberg University, Mainz, Germany
| | - Simon Rumpel
- Institute of Physiology, Focus Program Translational Neurosciences (FTN), University Medical Center, Johannes Gutenberg University, Mainz, Germany.
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Takaura K, Fujii N. Facilitative effect of repetitive presentation of one stimulus on cortical responses to other stimuli in macaque monkeys--a possible neural mechanism for mismatch negativity. Eur J Neurosci 2016; 43:516-28. [PMID: 26613160 PMCID: PMC5064748 DOI: 10.1111/ejn.13136] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2015] [Revised: 11/14/2015] [Accepted: 11/20/2015] [Indexed: 11/29/2022]
Abstract
The event-related potential 'mismatch negativity' (MMN) is an indicator of a perceiver's ability to detect deviations in sensory signal streams. MMN and its homologue in animals, mismatch activity (MMA), are differential neural responses to a repeatedly presented stimulus and a subsequent deviant stimulus (oddball). Because neural mechanisms underlying MMN and MMA remain unclear, there is a controversy as to whether MMN and MMA arise solely from stimulus-specific adaptation (SSA), in which the response to a stimulus cumulatively attenuates with its repetitive presentation. To address this issue, we used electrocorticography and the auditory roving-oddball paradigm in two awake macaque monkeys. We examined the effect of stimulus repetition number on MMA and on responses to repeated stimuli and oddballs across the cerebral cortex in the time-frequency domain. As the repetition number increased, MMA spread across the temporal, frontal and parietal cortices, and each electrode yielded a larger MMA. Surprisingly, this increment in MMA largely depended on response augmentation to the oddball rather than on SSA to the repeated stimulus. Following sufficient repetition, the oddball evoked a spectral power increment in some electrodes on the frontal cortex that had shown no power increase to the stimuli with less or no preceding repetition. We thereby revealed that repetitive presentation of one stimulus not only leads to SSA but also facilitates the cortical response to oddballs involving a wide range of cortical regions. This facilitative effect might underlie the generation of MMN-like scalp potentials in macaques that potentially shares similar neural mechanisms with MMN in humans.
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Affiliation(s)
- Kana Takaura
- Laboratory for Adaptive IntelligenceRIKEN Brain Science Institute2‐1 HirosawaWako‐shiSiatama 351‐0198Japan
| | - Naotaka Fujii
- Laboratory for Adaptive IntelligenceRIKEN Brain Science Institute2‐1 HirosawaWako‐shiSiatama 351‐0198Japan
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Detecting the unexpected. Curr Opin Neurobiol 2015; 35:142-7. [DOI: 10.1016/j.conb.2015.08.003] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2015] [Revised: 07/01/2015] [Accepted: 08/04/2015] [Indexed: 11/21/2022]
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Shen L, Zhao L, Hong B. Frequency-specific adaptation and its underlying circuit model in the auditory midbrain. Front Neural Circuits 2015; 9:55. [PMID: 26483641 PMCID: PMC4589587 DOI: 10.3389/fncir.2015.00055] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/22/2015] [Accepted: 09/16/2015] [Indexed: 11/13/2022] Open
Abstract
Receptive fields of sensory neurons are considered to be dynamic and depend on the stimulus history. In the auditory system, evidence of dynamic frequency-receptive fields has been found following stimulus-specific adaptation (SSA). However, the underlying mechanism and circuitry of SSA have not been fully elucidated. Here, we studied how frequency-receptive fields of neurons in rat inferior colliculus (IC) changed when exposed to a biased tone sequence. Pure tone with one specific frequency (adaptor) was presented markedly more often than others. The adapted tuning was compared with the original tuning measured with an unbiased sequence. We found inhomogeneous changes in frequency tuning in IC, exhibiting a center-surround pattern with respect to the neuron's best frequency. Central adaptors elicited strong suppressive and repulsive changes while flank adaptors induced facilitative and attractive changes. Moreover, we proposed a two-layer model of the underlying network, which not only reproduced the adaptive changes in the receptive fields but also predicted novelty responses to oddball sequences. These results suggest that frequency-specific adaptation in auditory midbrain can be accounted for by an adapted frequency channel and its lateral spreading of adaptation, which shed light on the organization of the underlying circuitry.
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Affiliation(s)
- Li Shen
- Department of Biomedical Engineering, School of Medicine, Tsinghua University Beijing, China
| | - Lingyun Zhao
- Department of Biomedical Engineering, School of Medicine, Tsinghua University Beijing, China
| | - Bo Hong
- Department of Biomedical Engineering, School of Medicine, Tsinghua University Beijing, China
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