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Alabí Córdova AS, Fecchio A, Calchi AC, Dias CM, Machado RZ, André MR. Molecular evidence of Bartonella spp. in tropical wild birds from the Brazilian Pantanal, the largest wetland in South America. Vet Res Commun 2024; 48:1631-1640. [PMID: 38443588 DOI: 10.1007/s11259-024-10341-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2023] [Accepted: 02/26/2024] [Indexed: 03/07/2024]
Abstract
Despite the worldwide occurrence of bartonellae in a broad range of mammal species, in which they usually cause a long-lasting erythrocytic bacteremia, few studies reported Bartonella spp. in avian hosts. The present work aimed to investigate the occurrence and molecular identity of Bartonella spp. infecting birds in the Pantanal wetland, central-western Brazil using a multigene approach. For this purpose, blood samples were collected from 517 individuals from 13 avian orders in the states of Mato Grosso and Mato Groso do Sul. DNA was extracted from avian blood and 500/517 (96.7%) samples were positive in a conventional PCR targeting the avian β-actin gene. Nineteen (3.8%) out of 500 avian blood samples were positive in a qPCR assay for Bartonella spp. based on the nuoG gene. Among 19 avian blood DNA samples positive in the qPCR for Bartonella spp., 12 were also positive in the qPCR for Bartonella based on the 16S-23S RNA Intergenic region (ITS). In the PCR assays performed for molecular characterization, one 16S rRNA, three ribC, and one nuoG sequences were obtained. Based on BLASTn results, while 1 nuoG, 2 ribC, and 2 ITS sequences showed high identity to Bartonella henselae, one 16S rRNA and 2 ITS showed high similarity to Bartonella machadoae in the sampled birds. Bartonella spp. related to B. henselae and B. machadoae were detected, for the first time, in wild birds from the Brazilian Pantanal.
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Affiliation(s)
- Amir Salvador Alabí Córdova
- Vector-Borne Bioagents Laboratory (VBBL), Departamento de Patologia, Reprodução E Saúde Única, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual "Júlio de Mesquita Filho", (FCAV/UNESP), Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, S/N, Zona Rural, São Paulo, Jaboticabal, CEP: 14884-900, Brazil
| | - Alan Fecchio
- Department of Ornithology, Academy of Natural Sciences of Drexel University, Philadelphia, PA, USA
| | - Ana Cláudia Calchi
- Vector-Borne Bioagents Laboratory (VBBL), Departamento de Patologia, Reprodução E Saúde Única, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual "Júlio de Mesquita Filho", (FCAV/UNESP), Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, S/N, Zona Rural, São Paulo, Jaboticabal, CEP: 14884-900, Brazil
| | - Clara Morato Dias
- Vector-Borne Bioagents Laboratory (VBBL), Departamento de Patologia, Reprodução E Saúde Única, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual "Júlio de Mesquita Filho", (FCAV/UNESP), Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, S/N, Zona Rural, São Paulo, Jaboticabal, CEP: 14884-900, Brazil
| | - Rosangela Zacarias Machado
- Vector-Borne Bioagents Laboratory (VBBL), Departamento de Patologia, Reprodução E Saúde Única, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual "Júlio de Mesquita Filho", (FCAV/UNESP), Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, S/N, Zona Rural, São Paulo, Jaboticabal, CEP: 14884-900, Brazil
| | - Marcos Rogério André
- Vector-Borne Bioagents Laboratory (VBBL), Departamento de Patologia, Reprodução E Saúde Única, Faculdade de Ciências Agrárias E Veterinárias, Universidade Estadual "Júlio de Mesquita Filho", (FCAV/UNESP), Campus de Jaboticabal, Via de Acesso Prof. Paulo Donato Castellane, S/N, Zona Rural, São Paulo, Jaboticabal, CEP: 14884-900, Brazil.
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Mohd-Azami SNI, Loong SK, Khoo JJ, Husin NA, Lim FS, Mahfodz NH, Ishak SN, Mohd-Taib FS, Makepeace BL, AbuBakar S. Molecular Surveillance for Vector-Borne Bacteria in Rodents and Tree Shrews of Peninsular Malaysia Oil Palm Plantations. Trop Med Infect Dis 2023; 8:tropicalmed8020074. [PMID: 36828490 PMCID: PMC9965954 DOI: 10.3390/tropicalmed8020074] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2022] [Revised: 01/16/2023] [Accepted: 01/16/2023] [Indexed: 01/20/2023] Open
Abstract
Many human clinical cases attributed to vector-borne pathogens are underreported in Malaysia, especially in rural localities where healthcare infrastructures are lacking. Here, 217 small mammals, consisting of rodents and tree shrews, were trapped in oil palm plantations in the Peninsular Malaysia states of Johor and Perak. Species identification was performed using morphological and DNA barcoding analyses, and 203 small mammals were included in the detection of selected vector-borne bacteria. The DNA extracted from the spleens was examined for Orientia tsutsugamushi, Borrelia spp., Bartonella spp. and Rickettsia spp. using established PCR assays. The small mammals collected in this study included Rattus tanezumi R3 mitotype (n = 113), Rattus argentiventer (n = 24), Rattus tiomanicus (n = 22), Rattus exulans (n = 17), Rattus tanezumi sensu stricto (n = 1) and Tupaia glis (n = 40). Orientia tsutsugamushi, Borrelia spp. and Bartonella phoceensis were detected in the small mammals with the respective detection rates of 12.3%, 5.9% and 4.9%. Rickettsia spp., however, was not detected. This study encountered the presence of both Lyme disease and relapsing fever-related borreliae in small mammals collected from the oil palm plantation study sites. All three microorganisms (Orientia tsutsugamushi, Borrelia spp. and Bartonella phoceensis) were detected in the R. tanezumi R3 mitotype, suggesting that the species is a competent host for multiple microorganisms. Further investigations are warranted to elucidate the relationships between the ectoparasites, the small mammals and the respective pathogens.
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Affiliation(s)
- Siti Nurul Izzah Mohd-Azami
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
- Institute for Advanced Studies (IAS), Universiti Malaya, Kuala Lumpur 50603, Malaysia
| | - Shih Keng Loong
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
- Correspondence:
| | - Jing Jing Khoo
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool L3 5RF, UK
| | - Nurul Aini Husin
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
- Institute for Advanced Studies (IAS), Universiti Malaya, Kuala Lumpur 50603, Malaysia
| | - Fang Shiang Lim
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
| | - Nur Hidayana Mahfodz
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
| | - Siti Nabilah Ishak
- Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, Bangi 43600, Malaysia
- Kuantan Fisheries Biosecurity Centre, Department of Fisheries Malaysia, Kuantan 25100, Malaysia
| | - Farah Shafawati Mohd-Taib
- Department of Biological Sciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, Bangi 43600, Malaysia
| | - Benjamin L. Makepeace
- Institute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool L3 5RF, UK
| | - Sazaly AbuBakar
- Tropical Infectious Diseases Research & Education Centre (TIDREC), Higher Institution Centre of Excellence, Universiti Malaya, Kuala Lumpur 50603, Malaysia
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Hustedt J, Prasetyo DB, Fiorenzano JM, von Fricken ME, Hertz JC. Phlebotomine sand flies (Diptera: Psychodidae) and sand fly-borne pathogens in the Greater Mekong Subregion: a systematic review. Parasit Vectors 2022; 15:355. [PMID: 36199150 PMCID: PMC9533508 DOI: 10.1186/s13071-022-05464-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2021] [Accepted: 09/03/2022] [Indexed: 11/20/2022] Open
Abstract
Phlebotomine sand flies are proven or suspected vectors of several pathogens of importance, including leishmaniasis, bartonellosis and sand fly fevers. Although sand flies have a worldwide distribution, there has been limited research published on sand flies and sand fly-borne pathogens throughout the Greater Mekong Sub-region (GMS). This review followed the PRISMA guidelines to determine the biodiversity and presence of phlebotomine sand flies and their associated pathogens in the GMS, specifically Cambodia, Thailand, the Lao People’s Democratic Republic (Laos), Malaysia and Vietnam. A total of 1472 records were identified by searching electronic databases, scanning reference lists of articles and consulting experts in the field. After screening of title and abstracts, 178 records remained and were further screened for original data (n = 34), not having regional data (n = 14), duplication of data (n = 4), records not available (n = 4) and no language translation available (n = 2). A total of 120 studies were then included for full review, with 41 studies on sand fly-related disease in humans, 33 studies on sand fly-related disease in animals and 54 entomological studies focused on sand flies (5 papers contained data on > 1 category), with a majority of the overall data from Thailand. There were relatively few studies on each country, with the exception of Thailand, and the studies applied different methods to investigate sand flies and sand fly-borne diseases, impacting the ability to conduct meaningful meta-analysis. The findings suggest that leishmaniasis in humans and the presence of sand fly vectors have been reported across several GMS countries over the past 100 years, with local transmission in humans confirmed in Thailand and Vietnam. Additionally, local Mundinia species are likely transmitted by biting midges. Findings from this study provide a framework for future investigations to determine the geographic distribution and risk profiles of leishmaniasis and other associated sand fly-borne disease throughout the GMS. It is recommended that researchers expand surveillance efforts across the GMS, with an emphasis placed on entomological surveys, syndromic and asymptomatic monitoring in both humans and animals and molecular characterization of sand flies and sand fly-borne pathogens, particularly in the understudied countries of Cambodia, Vietnam and Laos.
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Affiliation(s)
- John Hustedt
- Vysnova Partners, AXA Tower, 8 Shenton Way, Level 34-01, Singapore, Singapore.
| | - Didot Budi Prasetyo
- Entomology Division, Emerging Infections Department, U.S. Naval Medical Research Unit Two, Sembawang, Singapore, Singapore
| | - Jodi M Fiorenzano
- Entomology Division, Emerging Infections Department, U.S. Naval Medical Research Unit Two, Sembawang, Singapore, Singapore
| | - Michael E von Fricken
- Department of Global and Community Health, College of Health and Human Services, George Mason University, Fairfax, VA, USA
| | - Jeffrey C Hertz
- Entomology Division, Emerging Infections Department, U.S. Naval Medical Research Unit Two, Sembawang, Singapore, Singapore
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Yu J, Xie B, Bi GY, Zuo HH, Du XY, Bi LF, Li DM, Rao HX. Prevalence and diversity of small rodent-associated Bartonella species in Shangdang Basin, China. PLoS Negl Trop Dis 2022; 16:e0010446. [PMID: 35648747 PMCID: PMC9159596 DOI: 10.1371/journal.pntd.0010446] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2021] [Accepted: 04/22/2022] [Indexed: 11/18/2022] Open
Abstract
The aim of this study was to investigate the occurrence and molecular characteristics of Bartonella infections in small rodents in the Shangdang Basin, China. Small rodents were captured using snap traps, and their liver, spleen, and kidney tissues were harvested for Bartonella detection and identification using a combination of real-time PCR of the ssrA gene (296 bp) and conventional PCR and sequencing of the gltA gene (379 bp). Results showed that 55 of 147 small rodents to be positive for Bartonella, with a positivity rate of 37.41%, and 95% confidence interval of 29.50%- 45.33%. While the positivity rate across genders (42.62% in males and 33.72% in females, χ2 = 1.208, P = 0.272) and tissues (28.57% in liver, 33.59% in spleen, and 36.76% in kidney, χ2 = 2.197, P = 0.333) of small rodents was not statistically different, that in different habitats (5.13% in villages, 84.44% in forests, and 54.17% in farmlands, χ2 = 80.105, P<0.001) was statistically different. There were 42 Bartonella sequences identified in six species, including 30 B. grahamii, three B. phoceensis, two B. japonica, two B. queenslandensis, one B. fuyuanensis and four unknown Bartonella species from Niviventer confucianus, Apodemus agrarius and Tscherskia triton. In addition to habitat, Bartonella species infection could be affected by the rodent species as well. Among the Bartonella species detected in this area, B. grahamii was the dominant epidemic species (accounting for 71.43%). B. grahamii exhibited four distinct clusters, and showed a certain host specificity. In addition, 11 haplotypes of B. grahamii were observed using DNASP 6.12.03, among which nine haplotypes were novel. Overall, high occurrence and genetic diversity of Bartonella were observed among small rodents in the Shangdang Basin; this information could potentially help the prevention and control of rodent-Bartonella species in this area.
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Affiliation(s)
- Juan Yu
- Department of Basic Medical Sciences, Changzhi Medical College, Changzhi, China
| | - Bing Xie
- Department of Nursing, Changzhi Medical College, Changzhi, China
| | - Ge-Yue Bi
- Department of Clinical Medicine, Changzhi Medical College, Changzhi, China
| | - Hui-Hui Zuo
- Department of Teaching and Scientific Research, Heping Hospital Affiliated to Changzhi Medical College, Changzhi, China
| | - Xia-Yan Du
- Department of Clinical Medicine, Changzhi Medical College, Changzhi, China
| | - Li-Fang Bi
- Department of Clinical Medicine, Changzhi Medical College, Changzhi, China
| | - Dong-Mei Li
- State Key Laboratory for Infectious Disease Prevention and Control, Collaborative Innovation Center for Diagnosis and Treatment of Infectious Diseases, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, China
- * E-mail: (DML); (HXR)
| | - Hua-Xiang Rao
- Department of Public Health and Preventive Medicine, Changzhi Medical College, Changzhi, China
- * E-mail: (DML); (HXR)
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Liu H, Han T, Liu W, Xu G, Zheng K, Xiao F. Epidemiological characteristics and genetic diversity of Bartonella species in rodents from southeastern China. Zoonoses Public Health 2022; 69:224-234. [PMID: 35040279 DOI: 10.1111/zph.12912] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2021] [Revised: 10/09/2021] [Accepted: 01/01/2022] [Indexed: 12/15/2022]
Abstract
Rodents are the primary hosts of Bartonella species and carry more than 22 Bartonella species. However, the information on epidemiological characteristics and genetic diversity of Bartonella species in rodents in southeastern China is limited. From 2015 to 2020, 1,137 rodents were captured. Bartonella-positive DNA was detected in 14.9% (169/1,137) of rodents by PCR for both the ssrA and gltA genes. A highest Bartonella prevalence was detected in Apodemus agrarius (33.5%) and lowest in B. indica (1.8%). The probability of Bartonella infection in summer (20.1%) was higher than in spring (14.6%; p = .011, OR = 1.756). Sequencing and phylogenetic analysis revealed that nine known Bartonella species were identified in rodents, including B. tribocorum, B. grahamii, B. rattimassiliensis, B. queenslandensis, B. elizabethae, B. phoceensis, B. coopersplainsensis, B. japonica and B. rochalimae. In our study, Bartonella species exhibited a strong association with their hosts. Zoonotic B. tribocorum, B. grahamii, B. elizabethae and B. rochalimae were found in synanthropic rodent species in southeastern China, which pose a potential threat to the public health. To prevent the spread of zoonotic Bartonella species to humans, preventive and control measures should be implemented, and more research is needed to confirm the pathogen's association with human disease.
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Affiliation(s)
- Haixin Liu
- Department of Epidemiology and Health Statistics, School of Public Health, Fujian Medical University, Fuzhou, Fujian, China
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
| | - Tengwei Han
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
| | - Weijun Liu
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
| | - Guoying Xu
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
| | - Kuicheng Zheng
- Department of Epidemiology and Health Statistics, School of Public Health, Fujian Medical University, Fuzhou, Fujian, China
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
| | - Fangzhen Xiao
- Department of Epidemiology and Health Statistics, School of Public Health, Fujian Medical University, Fuzhou, Fujian, China
- Fujian Provincial Key Laboratory of Zoonosis Research, Fujian Center for Disease Control and Prevention, Fuzhou, Fujian, China
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Sayed ASM, Alsaadawy RM, Ali MM, Abd El-Hamid RF, Baty RS, Elmahallawy EK. Serological and Molecular Detection of Bartonella henselae in Cats and Humans From Egypt: Current Status and Zoonotic Implications. Front Vet Sci 2022; 9:859104. [PMID: 35498750 PMCID: PMC9047710 DOI: 10.3389/fvets.2022.859104] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2022] [Accepted: 03/11/2022] [Indexed: 11/13/2022] Open
Abstract
Bartonellosis is a vector-borne zoonotic disease caused by the intracellular bacterium of genus Bartonella. The disease has a worldwide distribution and cats represent the major reservoir of this disease. Despite its global distribution, very limited previous studies have investigated the occurrence of bartonellosis in cats and their owners in Egypt. In an endeavor to explore this topic, we investigated the occurrence of Bartonella henselae (B. henselae) infection in 225 samples (blood, saliva, and claw) obtained from 75 healthy cats in Upper Egypt. These samples were routinely obtained during veterinary clinic visits. This study also involved an examination of 100 humans, including cat owners and people with a history of contact with cats. Attempted isolation and identification of B. henselae in cats were also performed. Furthermore, PCR was performed for molecular identification of B. henselae in blood samples from cats. Meanwhile, an immunofluorescent assay was performed to study the seroprevalence of B. henselae infection in humans. In this study, B. henselae could not be isolated from any of the examined blood, saliva, or claw samples from cats. Interestingly, B. henselae was identified molecularly in 8% (6/75) of blood samples from cats. The seroprevalence of B. henselae in humans was 46% and its occurrence was higher in females (46.6%) than in males (41.7%) (P = 0.748). B. henselae infection was higher among cat owners [51.4% (19/37)] than among people with a history of contact with cats [42.9% (27/63)] (P = 0.410). Infection was higher in rural regions [79.5% (31/39)] than in urban regions [24.6% (15/61)] (P < 0.001). Collectively, this data provide interesting baseline information about the occurrence of B. henselae in cats and humans in Upper Egypt, which reflects the potential zoonotic transmission of this bacterium. Future study is mandatory to explore the occurrence of B. henselae in major reservoirs in Egypt.
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Affiliation(s)
- Amal S. M. Sayed
- Department of Zoonoses, Faculty of Veterinary Medicine, Assiut University, Asyut, Egypt
- *Correspondence: Amal S. M. Sayed
| | - Reem M. Alsaadawy
- Department of Zoonoses, Faculty of Veterinary Medicine, Assiut University, Asyut, Egypt
| | - Magda M. Ali
- Department of Surgery, Anesthesiology and Radiology, Faculty of Veterinary Medicine, Assiut University, Asyut, Egypt
| | - Rawhia F. Abd El-Hamid
- Department of Microbiology and Immunology, Faculty of Medicine, Assiut University, Asyut, Egypt
| | - Roua Sami Baty
- Department of Biotechnology, College of Science, Taif University, Taif, Saudi Arabia
| | - Ehab Kotb Elmahallawy
- Department of Zoonoses, Faculty of Veterinary Medicine, Sohag University, Sohag, Egypt
- Ehab Kotb Elmahallawy
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Krügel M, Król N, Kempf VAJ, Pfeffer M, Obiegala A. Emerging rodent-associated Bartonella: a threat for human health? Parasit Vectors 2022; 15:113. [PMID: 35361285 PMCID: PMC8969336 DOI: 10.1186/s13071-022-05162-5] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2021] [Accepted: 01/11/2022] [Indexed: 01/20/2023] Open
Abstract
Background Species of the genus Bartonella are facultative intracellular alphaproteobacteria with zoonotic potential. Bartonella infections in humans range from mild with unspecific symptoms to life threatening, and can be transmitted via arthropod vectors or through direct contact with infected hosts, although the latter mode of transmission is rare. Among the small mammals that harbour Bartonella spp., rodents are the most speciose group and harbour the highest diversity of these parasites. Human–rodent interactions are not unlikely as many rodent species live in proximity to humans. However, a surprisingly low number of clinical cases of bartonellosis related to rodent-associated Bartonella spp. have thus far been recorded in humans. Methods The main purpose of this review is to determine explanatory factors for this unexpected finding, by taking a closer look at published clinical cases of bartonellosis connected with rodent-associated Bartonella species, some of which have been newly described in recent years. Thus, another focus of this review are these recently proposed species. Conclusions Worldwide, only 24 cases of bartonellosis caused by rodent-associated bartonellae have been reported in humans. Possible reasons for this low number of cases in comparison to the high prevalences of Bartonella in small mammal species are (i) a lack of awareness amongst physicians of Bartonella infections in humans in general, and especially those caused by rodent-associated bartonellae; and (ii) a frequent lack of the sophisticated equipment required for the confirmation of Bartonella infections in laboratories that undertake routine diagnostic testing. As regards recently described Bartonella spp., there are presently 14 rodent-associated Candidatus taxa. In contrast to species which have been taxonomically classified, there is no official process for the review of proposed Candidatus species and their names before they are published. This had led to the use of malformed names that are not based on the International Code of Nomenclature of Prokaryotes. Researchers are thus encouraged to propose Candidatus names to the International Committee on Systematics of Prokaryotes for approval before publishing them, and only to propose new species of Bartonella when the relevant datasets allow them to be clearly differentiated from known species and subspecies. Graphical Abstract ![]()
Supplementary Information The online version contains supplementary material available at 10.1186/s13071-022-05162-5.
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Affiliation(s)
- Maria Krügel
- Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, An den Tierkliniken 1, 04103, Leipzig, Germany
| | - Nina Król
- Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, An den Tierkliniken 1, 04103, Leipzig, Germany
| | - Volkhard A J Kempf
- Institute for Medical Microbiology and Infection Control, University Hospital, Goethe University, Frankfurt am Main, Germany.,National Consiliary Laboratory for Bartonella, Frankfurt am Main, Germany
| | - Martin Pfeffer
- Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, An den Tierkliniken 1, 04103, Leipzig, Germany
| | - Anna Obiegala
- Institute of Animal Hygiene and Veterinary Public Health, University of Leipzig, An den Tierkliniken 1, 04103, Leipzig, Germany.
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Saengsawang P, Morand S, Desquesnes M, Yangtara S, Inpankaew T. Molecular Detection of Bartonella Species in Rodents Residing in Urban and Suburban Areas of Central Thailand. Microorganisms 2021; 9:microorganisms9122588. [PMID: 34946189 PMCID: PMC8704634 DOI: 10.3390/microorganisms9122588] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2021] [Revised: 12/11/2021] [Accepted: 12/13/2021] [Indexed: 12/26/2022] Open
Abstract
Bartonella spp. are Gram-negative zoonotic bacteria transmitted to humans via various blood-sucking arthropods. Rodents have been identified as reservoir hosts of several zoonotic pathogens, including Bartonella spp. In Thailand, studies of Bartonella spp. in rodents from urban areas are limited; thus, a study in this area is necessary. The objectives of this study were to detect Bartonella spp. in rodents in Thailand and to compare the species’ distribution across different areas. In total, 70 blood samples from rodents in urban and suburban areas were tested for Bartonella spp. using a conventional polymerase chain reaction that targeted the citrate synthase (gltA) gene. All Bartonella-positive sequences were analyzed using polymorphism in order to build a phylogenetic tree. Approximately 38% of the rodents studied contained Bartonella DNA. Both Rattus exulans (Pacific rat) and R. tanezumi (Asian house rat) contained Bartonella spp. Four species of Bartonella were detected in blood samples: B. tribocorum, B. phoceensis, B. grahamii, and B. rattimassiliensis. In addition, eight Pacific rats contained the B. kosoyi–B. tribocorum complex. Bartonella phoceensis and B. tribocorum–B. kosoyi complexes were found in a specific habitat (p < 0.05). Interestingly, only seven haplotypes were identified in the sequences analyzed, and only haplotype A was found in both rodent species. Finally, a monitoring program for zoonotic Bartonella infection, especially the B. kosoyi–B. tribocorum complex, B. phoceensis, B. grahamii, and B. rattimassiliensis should be established, especially in high-risk areas.
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Affiliation(s)
- Phirabhat Saengsawang
- Akkhraratchakumari Veterinary College, Walailak University, Nakhon Si Thammarat 80161, Thailand; or
| | - Serge Morand
- CNRS ISEM—CIRAD-ASTRE, Montpellier University, 34090 Montpellier, France;
- Faculty of Veterinary Technology, Kasetsart University, Bangkok 10900, Thailand
| | - Marc Desquesnes
- InterTryp, Université de Montpellier CIRAD-IRD, 34090 Montpellier, France;
- Ecole Nationale Vétérinaire de Toulouse (ENVT), 31300 Toulouse, France
| | - Sarawut Yangtara
- Department of Companion Animal Clinical Science, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand;
| | - Tawin Inpankaew
- Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand
- Correspondence:
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Saengsawang P, Kaewmongkol G, Phoosangwalthong P, Chimnoi W, Inpankaew T. Detection of zoonotic Bartonella species in ticks and fleas parasitizing free-ranging cats and dogs residing in temples of Bangkok, Thailand. Vet Parasitol Reg Stud Reports 2021; 25:100612. [PMID: 34474805 DOI: 10.1016/j.vprsr.2021.100612] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2021] [Revised: 07/15/2021] [Accepted: 07/22/2021] [Indexed: 10/20/2022]
Abstract
Bartonellosis is a vector-borne disease caused by intraerythrocytic bacteria known as Bartonella spp. The potential vectors that transmit Bartonella spp. are fleas, ticks, sand flies, and lice. Several Bartonella spp. cause diseases in humans; however, there is few molecular evidence of Bartonella spp. in vectors in Thailand. The objectives of this study were to investigate Bartonella spp. and to evaluate the spatial distribution of Bartonella spp. prevalence in the ectoparasites parasitizing free-ranging cats and dogs in temple clusters of Bangkok, Thailand. In total, 343 ectoparasites were studied to extract their genomic DNA. Species of all specimens were identified using an identification key and conventional polymerase chain reaction (cPCR) was applied to confirm flea and tick species. Extracted DNA samples were processed using primers that targeted the gltA, rpoB, ftsZ, and ribC genes of Bartonella spp. Then, PCR-positive amplicons were sequenced and a phylogenetic tree was constructed. Recorded data were statistically analyzed using descriptive statistics, the chi-square test, Fisher's exact test, and the odds ratio. Area data were analyzed and a prevalence distribution map was plotted. The major parasitizing ticks and fleas in this study were Rhipicephalus sanguineus and Ctenocephalides felis, respectively. Overall, the prevalence of Bartonella spp. in ectoparasites was 7.00%. The gltA amplicons revealed the presence of B. henselae (4.78%) and B. clarridgeiae (4.78%) in C. felis, and B. koehlerae (1.25%) and B. phoceensis (1.25%) in R. sanguineus. Bartonella DNA was encountered in 16/39 (41.03%) districts and 28.57% of the temple clusters. Bang Khun Thian district had the highest positive proportion and Bang Bon district showed co-evidence of different Bartonella species. In addition, the intervening zones were a risk factor of Bartonella (p < 0.05), and the distribution map showed a scattered pattern of Bartonella-positive clusters. Finally, fleas showed to be important vector reservoirs for Bartonella spp., especially zoonotic species, however, experimental studies are needed to prove the Bartonella transmission in ticks.
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Affiliation(s)
- Phirabhat Saengsawang
- Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand; Center of Excellence on Agricultural Biotechnology: (AG-BIO/MHESI), Bangkok 10900, Thailand; Akkhraratchakumari Veterinary College, Walailak University, Nakhon Si Thammarat 80161, Thailand
| | - Gunn Kaewmongkol
- Department of Companion Animal Clinical Sciences, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand
| | - Pornkamol Phoosangwalthong
- Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand; Center of Excellence on Agricultural Biotechnology: (AG-BIO/MHESI), Bangkok 10900, Thailand; Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand
| | - Wissanuwat Chimnoi
- Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand
| | - Tawin Inpankaew
- Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand; Center of Excellence on Agricultural Biotechnology: (AG-BIO/MHESI), Bangkok 10900, Thailand; Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok 10900, Thailand.
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10
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Azimi T, Azimi L, Fallah F, Pourmand MR, Peeri Dogaheh H, Rafiei Tabatabaei S. Detection and distribution of zoonotic pathogens in wild Norway rats ( Rattus norvegicus) from Tehran, Iran. New Microbes New Infect 2021; 42:100908. [PMID: 34336228 PMCID: PMC8318978 DOI: 10.1016/j.nmni.2021.100908] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/26/2021] [Revised: 05/12/2021] [Accepted: 06/07/2021] [Indexed: 10/30/2022] Open
Abstract
This is the first study on the prevalence of vector-borne zoonotic pathogens found in Rattus norvegicus (R. norvegicus) in urban areas of Tehran, Iran. Serological tests were used to detect IgG antibodies against Coxiella burnetii (C. burnetii) and Rickettsia spp. using a commercial qualitative rat ELISA kit. The frequency of Streptobacillus moniliformis (S. moniliformis) and Bartonella spp. was determined using a conventional PCR method. Molecular detection and characterization of Leptospira spp. were conducted using TaqMan real-time PCR based on lipL32 gene and SecY typing methods. A total of 100 R. norvegicus rats were collected from five regions in Tehran, Iran, and investigated to determine their zoonotic pathogens. S. moniliformis and Bartonella spp. were detected in 23 of 100 (23%) and 17 of 100 (17%) R. norvegicus populations, respectively. The highest prevalence of S. moniliformis and Bartonella spp. with similar frequency rates (n = 6/20; 30%) was seen among the R. norvegicus rats captured from the northern and southern parts of Tehran, respectively. Seroreactivity against C. burnetii and Rickettsia spp. was detected in 4% and 1% of R. norvegicus, respectively. C. burnetii. was identified only in one rat captured from the eastern part of Tehran. Results showed that Leptospira spp. was detected only in two rats, collected from the southern part (n = 2/20; 10%) of Tehran. The secY typing method identified two different Leptospira species including L. interrogans and L. kirschneri. The results showed that urban rats might play an important role in transmission of zoonotic pathogens to humans.
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Affiliation(s)
- T Azimi
- Department of Pathobiology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran
| | - L Azimi
- Pediatric Infection Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - F Fallah
- Department of Microbiology, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - M R Pourmand
- Department of Pathobiology, School of Public Health, Tehran University of Medical Sciences, Tehran, Iran
| | - H Peeri Dogaheh
- Department of Microbiology, School of Medicine, Ardabil University of Medical Science, Ardabil, Iran
| | - S Rafiei Tabatabaei
- Pediatric Infection Research Center, Research Institute for Children's Health, Shahid Beheshti University of Medical Sciences, Tehran, Iran
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11
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Takhampunya R, Thaloengsok S, Tippayachai B, Promsathaporn S, Leepitakrat S, Gross K, Davidson SA. Retrospective Survey of Borrelia spp. From Rodents and Ticks in Thailand. JOURNAL OF MEDICAL ENTOMOLOGY 2021; 58:1331-1344. [PMID: 33367702 DOI: 10.1093/jme/tjaa279] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Indexed: 06/12/2023]
Abstract
Borrelia is a genus of spirochetal bacteria with several species known to cause disease in humans. The distribution of Borrelia has rarely been studied in Thailand. In this study, a retrospective survey of Borrelia was conducted in ticks and wild rodents to better characterize the prevalence, diversity, and distribution of Borrelia across Thailand. Several pools of DNA from tick samples were positive for Borrelia spp. (36/258, 13.9%). Borrelia theileri/B. lonestari was found in 17 tick samples (16 pools of Haemaphysalis bandicota and 1 pool of Rhipicephalus sp.), and Borrelia yangtzensis was found in 8 tick samples (2 pools of H. bandicota and 6 pools of Ixodes granulatus). Borrelia spp. were detected at low prevalence levels in rodent tissue samples (24/2001, 1.2%), with 19 identified as B. theileri or B. lonestari and 5 identified as B. miyamotoi. Several geographic and species-specific infection trends were apparent, with Ixodes ticks infected with B. yangtzensis and Haemaphysalis and Rhipicephalus ticks infected with both B. yangtzensis and B. theileri/B. lonestari. Notably, B. yangtzensis showed a similar geographic distribution to B. miyamotoi, which was identified in new areas of Thailand in this study. The flagellin gene sequence from B. miyamotoi was more similar to European (99.3-99.9%) than Japanese (96.9-97.6%) genotypes. This study greatly expands the knowledge of Borrelia in Thailand and identified several Borrelia species for the first time. It also found several ticks and rodents infected with the pathogen that were not previously known to carry Borrelia.
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Affiliation(s)
- Ratree Takhampunya
- Department of Entomology, United States Army Medical Directorate - Armed Forces Research Institute of Medical Sciences, APO AP, Bangkok, Thailand
| | - Sasikanya Thaloengsok
- Department of Entomology, United States Army Medical Directorate - Armed Forces Research Institute of Medical Sciences, APO AP, Bangkok, Thailand
| | - Bousaraporn Tippayachai
- Department of Entomology, United States Army Medical Directorate - Armed Forces Research Institute of Medical Sciences, APO AP, Bangkok, Thailand
| | - Sommai Promsathaporn
- Department of Entomology, United States Army Medical Directorate - Armed Forces Research Institute of Medical Sciences, APO AP, Bangkok, Thailand
| | - Surachai Leepitakrat
- Department of Entomology, United States Army Medical Directorate - Armed Forces Research Institute of Medical Sciences, APO AP, Bangkok, Thailand
| | - Katelynn Gross
- Department of Chemistry and Life Science, United States Military Academy, West Point, NY
| | - Silas A Davidson
- Department of Chemistry and Life Science, United States Military Academy, West Point, NY
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12
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Aleksandravičienė A, Paulauskas A, Stanko M, Fričová J, Radzijevskaja J. New Records of Bartonella spp. and Rickettsia spp. in Lice Collected from Small Rodents. Vector Borne Zoonotic Dis 2021; 21:342-350. [PMID: 33728990 DOI: 10.1089/vbz.2020.2722] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Lice are blood-sucking insects that are of medical and veterinary significance as parasites and vectors for various infectious agents. More than half of described blood-sucking lice species are found on rodents. Rodents are important hosts of several Bartonella and Rickettsia species, and some of these bacteria are characterized as human pathogens in Europe. Rodent ectoparasites, such as fleas and ticks, are important vectors of Bartonella spp. and Rickettsia spp., but knowledge about the presence of these bacteria in lice is limited. The aim of this study was to determine the prevalence of Bartonella and Rickettsia bacteria in lice collected from rodents in Slovakia. The ectoparasites were collected from small rodents captured from 2010 to 2015 at four different sites in eastern Slovakia. The presence of Bartonella and Rickettsia species in lice samples was screened by real-time PCR, targeting ssrA and gltA genes, respectively. The molecular characterization of the Bartonella strains was based on sequence analysis of partial rpoB and intergenic spacer (ITS) genes, and of the Rickettsia species on sequence analysis of the gltA gene. A total of 1074 lice of seven species were collected from six rodent species. Bartonella DNA was detected in Hoplopleura affinis (collected from Apodemus agrarius, Apodemus flavicollis, and Myodes glareolus), Polyplax serrata (from A. agrarius), and Hoplopleura sp. (from A. flavicollis). Sequence analysis revealed that the Bartonella strains belonged to the Bartonella coopersplainsensis, Bartonella tribocorum, and Bartonella taylorii genogroups. Rickettsia DNA was detected in H. affinis and P. serrata collected from A. agrarius. Sequence analysis revealed two Rickettsia species: Rickettsia helvetica and Rickettsia sp. The results of the study confirm the presence of Bartonella spp. and Rickettsia spp. in lice collected from rodents.
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Affiliation(s)
| | | | - Michal Stanko
- Department of Vector-Borne Diseases, Institute of Parasitology, Slovak Academy of Sciences, Košice, Slovak Republic
| | - Jana Fričová
- Department of Vector-Borne Diseases, Institute of Parasitology, Slovak Academy of Sciences, Košice, Slovak Republic
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13
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Molecular survey of Bartonella spp. in rodents and fleas from Chile. Acta Trop 2020; 212:105672. [PMID: 32835672 DOI: 10.1016/j.actatropica.2020.105672] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2020] [Revised: 08/17/2020] [Accepted: 08/18/2020] [Indexed: 12/11/2022]
Abstract
The aim of this study was to molecularly survey Bartonella spp. in rodents from the Valdivia Province, Southern Chile and from wild black rat-fleas in Guafo Island, Chilean Patagonia. Thrity-three spleens from synanthropic (Mus musculus, Rattus novergicus and Rattus rattus) and wild (Abrothrix longipilis, Oligoryzomys longicaudatus, Abrothrix sp.) rodents from Valdivia and 39 fleas/flea-pools (Plocopsylla sp. and Nosopsyllus sp.) from R. rattus in Guafo Island were obtained. All samples were screened by high-resolution melting (HRM) real-time PCR for Bartonella ITS locus (190 bp). ITS-Positive samples were further analyzed for two HRM real-time PCR assays targeting Bartonella rpoB (191 bp) and gltA (340 bp) gene fragments. All positive ITS, gltA and rpoB real-time PCR products were purified and sequenced. Bayesian inference trees were built for the gltA and rpoB gene fragments. Bartonella-ITS DNA was detected in 36.3% (12/33) [95% CI (22-53%)] of the tested rodents from Valdivia, being identified in all but O. longicaudatus rodent species captured in this study. ITS DNA was detected in 28% (11/39) [95% CI (16-43%)] of fleas/flea-pools from Guafo Island and identified in both Plocopsylla and Nosopsyllus genera. Sequencing and phylogenic analyses targeting three loci of Bartonella spp. allowed the identification of five genotypes in rodents from Southern Chile, potentially belonging to three different Bartonella spp. Those included Bartonella tribocorum identified from R. rattus, Bartonella rochalimae detected from Abrothix sp., and one novel genotype from uncharacterized Bartonella sp. identified in M. musculus, R. norvegicus, A. longipilis, and Abothrix sp., related to strains previously isolated in Phyllotis sp. from Peru. Additionally, two genotypes of B. tribocorum were identified in fleas from Guafo. In a nutshell, highly diverse and potentially zoonotic Bartonella spp. are described for the first time in wild and synanthropic rodents from Chile, and B. tribocorum was detected in wild back rat fleas from Guafo Island.
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Panthawong A, Grieco JP, Ngoen-Klan R, Chao CC, Chareonviriyaphap T. Detection of Anaplasma spp. and Bartonella spp. from wild-caught rodents and their ectoparasites in Nakhon Ratchasima Province, Thailand. JOURNAL OF VECTOR ECOLOGY : JOURNAL OF THE SOCIETY FOR VECTOR ECOLOGY 2020; 45:241-253. [PMID: 33207059 DOI: 10.1111/jvec.12395] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/27/2020] [Accepted: 07/25/2020] [Indexed: 06/11/2023]
Abstract
The objective of this study was to investigate evidence of emerging anaplasmosis and bartonellosis in rodents from endemic areas of Nakhon Ratchasima, Thailand. Rodent trapping was undertaken in 13 sub-districts of Muang District. The live-capture traps were set up in three locations of selected scrub typhus patient houses for three consecutive nights. Wild-caught rodent whole blood samples and associated ticks and fleas were collected and tested for Anaplasma spp. and Bartonella spp. In addition, heat maps using GIS software were used to determine the density of infection of positive wild-caught rodents. A total of 347 wild-caught rodents of nine species was captured. Rattus rattus (38.6%) was the dominant species. A total of 1,518 Heamaphysalis bandicota ticks and 57 Xenopsylla cheopis fleas was removed. Twenty-two of the 347 tested blood samples (6.3%) were Anaplasma bovis-positive and 121 blood samples and five out of 27 pools of X. cheopis fleas were Bartonella queenslandensis-positive. Of these infected rodents, dual-infections between A. bovis and B. queenslandensis were found in three B. indica rodents. Our results offer new information concerning the infections of A. bovis and B. queenslandensis in both rodents and their ectoparasites collected in high-risk areas of rodent-borne diseases in Thailand.
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Affiliation(s)
- Amonrat Panthawong
- Department of Entomology, Faculty of Agriculture, Kasetsart University, angkok, 10900, Thailand
| | - John Paul Grieco
- Department of Biological Sciences, University of Notre Dame, IN, 46556, U.S.A
| | - Ratchadawan Ngoen-Klan
- Department of Entomology, Faculty of Agriculture, Kasetsart University, angkok, 10900, Thailand
| | - Chien-Chung Chao
- Viral and Rickettsial Diseases Department, Naval Medical Research Center Silver Spring, MD, 20910, U.S.A
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15
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Diarra AZ, Kone AK, Doumbo Niare S, Laroche M, Diatta G, Atteynine SA, Coulibaly M, Sangare AK, Kouriba B, Djimde A, Dabo A, Sagara I, Davoust B, Ranque S, Thera MA, Raoult D, Doumbo OK, Parola P. Molecular Detection of Microorganisms Associated with Small Mammals and Their Ectoparasites in Mali. Am J Trop Med Hyg 2020; 103:2542-2551. [PMID: 33146105 DOI: 10.4269/ajtmh.19-0727] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Small mammals are the natural reservoirs for many zoonotic pathogens. Using molecular tools, we assessed the prevalence of bacteria and protozoans in small mammals and their ectoparasites in Faladjè, Bougouni, and Bamoko, Mali. A total of 130 small mammals belonging to 10 different species were captured, of which 74 (56.9%) were infested by ectoparasites, including Laelaps echidnina, Xenopsylla cheopis, Amblyomma variegatum, Rhipicephalus sanguineus sensu lato, and Haemaphysalis spp. nymphs. DNA of Bartonella was found in 14/75 (18.7%), 6/48 (12.5%), and 3/7 (42.8%) small mammals from Faladjè, Bougouni, and Bamako, respectively. In Faladjè, Bartonella DNA was detected in 31/68 (45.6%) of L. echidnina and 14/22 (63.6%) of X. cheopis. In Bougouni, it was found in 2/26 (7.7%) of L. echidnina and 10/42 (23.8%) of X. cheopis. The sequences of Bartonella obtained from small mammals were close to those of Bartonella mastomydis, Bartonella elizabethae, and uncultured Bartonella spp. In Faladjè, Coxiella burnetii DNA was detected in 64.4% (29/45) of Haemaphysalis spp. ticks, 4.5% (2/44) of Mastomys erythroleucus, 12.5% (1/8) of Praomys daltoni, and 1.5% (1/68) of L. echidnina. We found DNA of Wolbachia in X. cheopis from Faladjè and DNA of Rickettsia africae and Ehrlichia ruminantium in Am. variegatum from Bougouni. The results of our study show that several small mammal species harbor and may serve as potential reservoirs of Bartonella spp., likely to play a major role in the maintenance, circulation, and potential transmission of bacteria in Mali. The pathogenicity of these bacteria for humans or animals remains to be demonstrated.
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Affiliation(s)
- Adama Zan Diarra
- Aix Marseille Univ., IRD, AP-HM, SSA, VITROME, Marseille, France.,Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali.,IHU-Méditerranée Infection, Marseille, France
| | - Abdoulaye Kassoum Kone
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Safiatou Doumbo Niare
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Maureen Laroche
- IHU-Méditerranée Infection, Marseille, France.,Aix Marseille Univ., IRD, AP-HM, SSA, VITROME, Marseille, France
| | - Georges Diatta
- VITROME Dakar, Campus International IRD-UCAD Hann, Dakar, Senegal
| | | | - Maïmouna Coulibaly
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Abdoul Karim Sangare
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali.,Centre d'Infectiologie Charles Mérieux, Bamako, Mali
| | - Bouréma Kouriba
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali.,Centre d'Infectiologie Charles Mérieux, Bamako, Mali
| | - Abdoulaye Djimde
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Abdoulaye Dabo
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Issaka Sagara
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Bernard Davoust
- IHU-Méditerranée Infection, Marseille, France.,Aix Marseille Univ., IRD, AP-HM, MEPHI, Marseille, France
| | - Stéphane Ranque
- IHU-Méditerranée Infection, Marseille, France.,Aix Marseille Univ., IRD, AP-HM, SSA, VITROME, Marseille, France
| | - Mahamadou A Thera
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Didier Raoult
- IHU-Méditerranée Infection, Marseille, France.,Aix Marseille Univ., IRD, AP-HM, MEPHI, Marseille, France
| | - Ogobara K Doumbo
- Malaria Research and Training Center (MRTC), Department of Epidemiology of Parasitic Diseases (DEAP), Faculty of Medicine and Dentistry, UMI 3189 "Environnement, Santé, Sociétés", University of Science, Techniques and Technologies of Bamako (USTTB), Bamako, Mali
| | - Philippe Parola
- IHU-Méditerranée Infection, Marseille, France.,Aix Marseille Univ., IRD, AP-HM, SSA, VITROME, Marseille, France
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16
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Gonçalves LR, Harrus S, Herrera HM, Gutiérrez R, Pedrassani D, Nantes WAG, Santos FM, Porfírio GEDO, Barreto WTG, de Macedo GC, Assis WDO, Campos JBV, da Silva TMV, Biolchi J, de Sousa KCM, Nachum-Biala Y, Barros-Battesti DM, Machado RZ, André MR. Low occurrence of Bartonella in synanthropic mammals and associated ectoparasites in peri-urban areas from Central-Western and Southern Brazil. Acta Trop 2020; 207:105513. [PMID: 32371220 DOI: 10.1016/j.actatropica.2020.105513] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/08/2020] [Revised: 04/19/2020] [Accepted: 04/19/2020] [Indexed: 12/12/2022]
Abstract
Worldwide, Bartonella species are known to infect a wide range of mammalian and arthropod hosts, including humans. The current study aimed to investigate the prevalence of Bartonella spp. in synanthropic mammals captured in peri-urban areas from Central-Western and Southern Brazil and their ectoparasites. For this aim, 160 mammals belonging to four species, and 218 associated arthropods were sampled. DNA was extracted and subjected to different Bartonella screening assays. Additionally, blood samples from 48 small rodents were submitted to liquid BAPGM culture followed by qPCR assay and solid culture. Two out of 55 Rattus captured in Santa Catarina state were PCR-positive for Bartonella when targeting the nuoG, 16S, and ITS loci. Sequences showed high homology with Bartonella coopersplainsensis. Conversely, all 48 small rodents, 14 capybaras and 43 opossum DNA samples from animals trapped in Mato Grosso do Sul were Bartonella negative in the HRM real time PCR assays targeting the ITS locus and gltA gene. Additionally, all mammal-associated ectoparasites showed negativity results based on HRM real time PCR assays. The present study showed, for the first time, the occurrence of B. coopersplainsensis in Brazil, shedding some light on the distribution of rats-related Bartonella in South America. In addition, the majority of rodents and marsupials were negative for Bartonella spp. Since B. coopersplainsensis reservoirs - Rattus spp. - are widely dispersed around the globe, their zoonotic potential should be further investigated.
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17
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Qiu Y, Kajihara M, Nakao R, Mulenga E, Harima H, Hang’ombe BM, Eto Y, Changula K, Mwizabi D, Sawa H, Higashi H, Mweene A, Takada A, Simuunza M, Sugimoto C. Isolation of Candidatus Bartonella rousetti and Other Bat-associated Bartonellae from Bats and Their Flies in Zambia. Pathogens 2020; 9:pathogens9060469. [PMID: 32545824 PMCID: PMC7350321 DOI: 10.3390/pathogens9060469] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 06/09/2020] [Accepted: 06/12/2020] [Indexed: 12/12/2022] Open
Abstract
Bat-associated bartonellae, including Bartonella mayotimonensis and Candidatus Bartonella rousetti, were recently identified as emerging and potential zoonotic agents, respectively. However, there is no report of bat-associated bartonellae in Zambia. Thus, we aimed to isolate and characterize Bartonella spp. from bats and bat flies captured in Zambia by culturing and PCR. Overall, Bartonella spp. were isolated from six out of 36 bats (16.7%), while Bartonella DNA was detected in nine out of 19 bat flies (47.3%). Subsequent characterization using a sequence of five different genes revealed that three isolates obtained from Egyptian fruit bats (Rousettus aegyptiacus) were Ca. B. rousetti. The isolates obtained from insectivorous bats (Macronycteris vittatus) were divided into two previously unclassified bat-associated bartonellae. A phylogenetic analysis of the six genotypes of Bartonella gltA sequences from nine pathogen-positive bat flies revealed that three genotypes belonged to the same clades as bat-associated bartonellae, including Ca. B. rousetti. The other three genotypes represented arthropod-associated bartonellae, which have previously been isolated only from ectoparasites. We demonstrated that Ca. B. rousetti is maintained between bats (R. aegyptiacus) and bat flies in Zambia. Continuous surveillance of Bartonella spp. in bats and serological surveys in humans in Africa are warranted to evaluate the public health importance of bat-associated bartonellae.
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Affiliation(s)
- Yongjin Qiu
- Hokudai Center for Zoonosis Control in Zambia, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.Q.); (M.K.); (H.H.); (H.H.)
| | - Masahiro Kajihara
- Hokudai Center for Zoonosis Control in Zambia, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.Q.); (M.K.); (H.H.); (H.H.)
- Division of Global Epidemiology, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.E.); (A.T.)
| | - Ryo Nakao
- Laboratory of Parasitology, Graduate School of Infectious Diseases, Faculty of Veterinary Medicine, Hokkaido University, Sapporo 060-0818, Japan;
| | - Evans Mulenga
- Department of Para-Clinical Studies, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia; (E.M.); (B.M.H.); (K.C.)
| | - Hayato Harima
- Hokudai Center for Zoonosis Control in Zambia, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.Q.); (M.K.); (H.H.); (H.H.)
| | - Bernard Mudenda Hang’ombe
- Department of Para-Clinical Studies, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia; (E.M.); (B.M.H.); (K.C.)
- Global Virus Network Affiliate Center of Excellence, the University of Zambia, Lusaka 10101, Zambia;
- African Center of Excellence for Infectious Diseases of Humans and Animals, the University of Zambia, Lusaka 10101, Zambia
| | - Yoshiki Eto
- Division of Global Epidemiology, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.E.); (A.T.)
| | - Katendi Changula
- Department of Para-Clinical Studies, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia; (E.M.); (B.M.H.); (K.C.)
| | - Daniel Mwizabi
- Department of National Parks and Wildlife, Ministry of Tourism and Arts of Zambia, Lusaka 10101, Zambia;
| | - Hirofumi Sawa
- Division of Molecular Pathobiology, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan;
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Sapporo 001-0020, Japan
- Global Virus Network, Baltimore, MD 21201, USA
| | - Hideaki Higashi
- Hokudai Center for Zoonosis Control in Zambia, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.Q.); (M.K.); (H.H.); (H.H.)
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Sapporo 001-0020, Japan
- Division of Infection and Immunity, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan
| | - Aaron Mweene
- Global Virus Network Affiliate Center of Excellence, the University of Zambia, Lusaka 10101, Zambia;
- African Center of Excellence for Infectious Diseases of Humans and Animals, the University of Zambia, Lusaka 10101, Zambia
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
| | - Ayato Takada
- Division of Global Epidemiology, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan; (Y.E.); (A.T.)
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Sapporo 001-0020, Japan
| | - Martin Simuunza
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
| | - Chihiro Sugimoto
- Department of Disease Control, School of Veterinary Medicine, the University of Zambia, Lusaka 10101, Zambia;
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Sapporo 001-0020, Japan
- Division of Collaboration and Education, Hokkaido University Research Center for Zoonosis Control, Sapporo 001-0020, Japan
- Correspondence: ; Tel.: +81-11-706-5297
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Duan DY, Zhou HM, Cheng TY. Comparative analysis of microbial community in the whole body and midgut from fully engorged and unfed female adult Melophagus ovinus. MEDICAL AND VETERINARY ENTOMOLOGY 2020; 34:215-224. [PMID: 31840281 DOI: 10.1111/mve.12424] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/04/2019] [Revised: 11/26/2019] [Accepted: 11/27/2019] [Indexed: 06/10/2023]
Abstract
Melophagus ovinus is a type of ectoparasite infesting sheep. Data regarding the comprehensive bacterial community associated with the whole body and midgut of M. ovinus under different engorged statuses are required. Melophagus ovinus were collected from the city of Jiuquan, China. Bacterial DNA was extracted from the whole body and midgut of fully engorged female adults, or newly hatched and unfed adult female M. ovinus. The 16S rRNA gene V3-V4 hypervariable regions were sequenced using the IonS5™XL platform (Thermo Fisher Scientific, Waltham, MA, U.S.A.). The whole body bacterial diversity of the newly hatched, unfed adult females was greater compared with that of the other three samples. Proteobacteria was the dominant bacterial phylum in all of the samples. Of the 42 total bacterial genera present in all of the experimental samples, Arsenophonus, Bartonella and Wolbachia were the dominant genera. The relative abundance of Arsenophonus in midgut was greater than that in the whole body. The relative abundance of Bartonella in fully engorged adults was far greater than those in newly hatched, unfed adults. The relative abundance of Wolbachia was highest in the whole body of newly hatched, unfed adults. Seventeen bacterial species were identified in all experimental samples. Bartonella chomelii, Streptococcus hyointestinalis and Escherichia coli were the first species reported in M. ovinus.
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Affiliation(s)
- D-Y Duan
- College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan, China
| | - H-M Zhou
- College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan, China
| | - T-Y Cheng
- College of Veterinary Medicine, Hunan Agricultural University, Changsha, Hunan, China
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19
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Glowska E, Filutowska ZK, Dabert M, Gerth M. Microbial composition of enigmatic bird parasites: Wolbachia and Spiroplasma are the most important bacterial associates of quill mites (Acariformes: Syringophilidae). Microbiologyopen 2020; 9:e964. [PMID: 32141700 PMCID: PMC7221428 DOI: 10.1002/mbo3.964] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Revised: 10/10/2019] [Accepted: 10/14/2019] [Indexed: 12/12/2022] Open
Abstract
Background The microbiome is an integral component of many animal species, potentially affecting behavior, physiology, and other biological properties. Despite this importance, bacterial communities remain vastly understudied in many groups of invertebrates, including mites. Quill mites (Acariformes: Syringophilidae) are a poorly known group of permanent bird ectoparasites that occupy quills of feathers and feed on bird subcutaneous tissue and fluids. Most of the known species have strongly female‐biased sex ratio, and it was hypothesized that this is caused by endosymbiotic bacteria. Previously, Anaplasma phagocytophilum (Foggie) and a high diversity of Wolbachia strains were detected in quill mites via targeted PCR screens. Here, we use an unbiased 16S rRNA gene amplicon sequencing approach to determine other bacteria that potentially impact quill mite biology. Results We performed 16S rRNA gene amplicon sequencing of 126 quill mite individuals from eleven species parasitizing twelve species (four families) of passeriform birds. In addition to Wolbachia, we found Spiroplasma as potential symbiont of quill mites. Consistently, high Spiroplasma titers were only found in individuals of two mite species associated with finches of the genus Carduelis, suggesting a history of horizontal transfers of Spiroplasma via the bird host. Furthermore, there was evidence for Spiroplasma negatively affecting Wolbachia titers. We found no evidence for the previously reported Anaplasma in quill mites, but detected sequences of high similarity to the potential pathogens Brucella and Bartonella at low abundances. Other amplicon sequence variants (ASVs) could be assigned to a diverse number of bacterial taxa, including several that were previously isolated from bird skin. Further, many frequently found ASVs were assigned to taxa that show a very broad distribution with no strong prior evidence for symbiotic association with animals. We interpret these findings as evidence for a scarcity of resident microbial associates (other than inherited symbionts) in quill mites.
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Affiliation(s)
- Eliza Glowska
- Faculty of Biology, Department of Animal Morphology, Adam Mickiewicz University in Poznań, Poznan, Poland
| | - Zuzanna Karolina Filutowska
- Faculty of Biology, Molecular Biology Techniques Laboratory, Adam Mickiewicz University in Poznań, Poznan, Poland.,Faculty of Biology, Department of Gene Expression, Institute of Molecular Biology and Biotechnology, Adam Mickiewicz University in Poznań, Poznan, Poland
| | - Miroslawa Dabert
- Faculty of Biology, Molecular Biology Techniques Laboratory, Adam Mickiewicz University in Poznań, Poznan, Poland
| | - Michael Gerth
- Department of Biological and Medical Sciences, Oxford Brookes University, Oxford, UK
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20
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Molecular detection and genetic characterization of Bartonella species from rodents and their associated ectoparasites from northern Tanzania. PLoS One 2019; 14:e0223667. [PMID: 31613914 PMCID: PMC6793857 DOI: 10.1371/journal.pone.0223667] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Accepted: 09/25/2019] [Indexed: 12/25/2022] Open
Abstract
Background Bartonellae are intracellular bacteria, which can cause persistent bacteraemia in humans and a variety of animals. Several rodent-associated Bartonella species are human pathogens but data on their global distribution and epidemiology are limited. The aims of the study were to: 1) determine the prevalence of Bartonella infection in rodents and fleas; 2) identify risk factors for Bartonella infection in rodents; and 3) characterize the Bartonella genotypes present in these rodent and flea populations. Methods and results Spleen samples collected from 381 rodents representing six different species were tested for the presence of Bartonella DNA, which was detected in 57 individuals (15.0%; 95% CI 11.3–18.5), of three rodent species (Rattus rattus n = 54, Mastomys natalensis n = 2 and Paraxerus flavovottis n = 1) using a qPCR targeting the ssrA gene. Considering R. rattus individuals only, risk factor analysis indicated that Bartonella infection was more likely in reproductively mature as compared to immature individuals (OR = 3.42, p <0.001). Bartonella DNA was also detected in 53 of 193 Xenopsylla cheopis fleas (27.5%: 95% CI 21.3–34.3) collected from R.rattus individuals. Analysis of ssrA and gltA sequences from rodent spleens and ssrA sequences from fleas identified multiple genotypes closely related (≥ 97% similar) to several known or suspected zoonotic Bartonella species, including B. tribocorum, B. rochalimae, B. elizabethae and B. quintana. Conclusions The ssrA and gltA sequences obtained from rodent spleens and ssrA sequences obtained from fleas reveal the presence of a diverse set of Bartonella genotypes and increase our understanding of the bartonellae present in Tanzanian. Further studies are needed to fully characterise the prevalence, genotypes and diversity of Bartonella in different host populations and their potential impacts on human health.
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21
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Moreno Salas L, Espinoza-Carniglia M, Lizama Schmeisser N, Torres LG, Silva-de la Fuente MC, Lareschi M, González-Acuña D. Fleas of black rats ( Rattus rattus) as reservoir host of Bartonella spp. in Chile. PeerJ 2019; 7:e7371. [PMID: 31396444 PMCID: PMC6679904 DOI: 10.7717/peerj.7371] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/26/2019] [Accepted: 06/27/2019] [Indexed: 01/10/2023] Open
Abstract
Background Rattus rattus is a widely distributed, invasive species that presents an important role in disease transmission, either directly or through vector arthropods such as fleas. These black rats can transmit a wide variety of pathogens, including bacteria of the genus Bartonella, which can cause diseases in humans and animals. In Chile, no data are available identifying fleas from synanthropic rodents as Bartonella vectors. The aim of this study was to investigate the prevalence of Bartonella spp. in the fleas of R. rattus in areas with different climate conditions and featuring different human population densities. Methods In all, 174 fleas collected from 261 R. rattus captured from 30 localities with different human densities (cities, villages, and wild areas) across five hydrographic zones of Chile (hyper-arid, arid, semi-arid, sub-humid, and hyper-humid) were examined. Bartonella spp. presence was determined through polymerase chain reaction, using gltA and rpoB genes, which were concatenated to perform a similarity analysis with BLAST and phylogenetic analysis. Results Overall, 15 fleas species were identified; Bartonella gltA and rpoB fragments were detected in 21.2% (37/174) and 19.5% (34/174) of fleas, respectively. A total of 10 of the 15 fleas species found were positive for Bartonella DNA. Leptopsylla segnis was the most commonly collected flea species (n = 55), and it also presented a high prevalence of Bartonella DNA (P% = 34.5%). The highest numbers of fleas of this species were collected in villages of the arid zone. There were no seasonal differences in the prevalence of Bartonella DNA. The presence of Bartonella DNA in fleas was recorded in all hydrographic areas, and the arid zone presented the highest prevalence of this species. Regarding areas with different human densities, the highest prevalence was noted in the villages (34.8% gltA and 31.8% rpoB), followed by cities (14.8% gltA and 11.1% rpoB) and wild areas (7.4% gltA and 14.8% rpoB). The BLAST analysis showed a high similitude (>96%) with four uncharacterized Bartonella genotypes and with two species with zoonotic potential: B. mastomydis and B. tribocorum. The phylogenetic analysis showed a close relationship with B. elizabethae and B. tribocorum. This is the first study to provide evidence of the presence of Bartonella in fleas of R. rattus in Chile, indicating that the villages and arid zone correspond to areas with higher infection risk.
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Affiliation(s)
- Lucila Moreno Salas
- Departamento de Zoología, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Mario Espinoza-Carniglia
- Departamento de Zoología, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - Nicol Lizama Schmeisser
- Departamento de Zoología, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile
| | - L Gonzalo Torres
- Departamento de Zoología, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción, Chile.,Facultad de Ciencias, Programa de Magíster en Ciencias mención Ecología Aplicada, Universidad Austral de Chile, Valdivia, Chile
| | - María Carolina Silva-de la Fuente
- Departamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Laboratorio de Parásitos y Enfermedades de Fauna Silvestre, Universidad de Concepción, Chillán, Chile.,Facultad de Medicina Veterinaria, Universidad San Sebastián, Concepción, Chile
| | - Marcela Lareschi
- Centro de Estudios Parasitológicos y de Vectores CEPAVE (CONICET CCT-La Plata-UNLP), La Plata, Argentina
| | - Daniel González-Acuña
- Departamento de Ciencia Animal, Facultad de Ciencias Veterinarias, Laboratorio de Parásitos y Enfermedades de Fauna Silvestre, Universidad de Concepción, Chillán, Chile
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22
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Morand S, Blasdell K, Bordes F, Buchy P, Carcy B, Chaisiri K, Chaval Y, Claude J, Cosson JF, Desquesnes M, Jittapalapong S, Jiyipong T, Karnchanabanthoen A, Pornpan P, Rolain JM, Tran A. Changing landscapes of Southeast Asia and rodent-borne diseases: decreased diversity but increased transmission risks. ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2019; 29:e01886. [PMID: 30986339 DOI: 10.1002/eap.1886] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2018] [Revised: 10/26/2018] [Accepted: 12/04/2018] [Indexed: 05/15/2023]
Abstract
The reduction in biodiversity from land use change due to urbanization and agricultural intensification appears to be linked to major epidemiological changes in many human diseases. Increasing disease risks and the emergence of novel pathogens result from increased contact among wildlife, domesticated animals, and humans. We investigated the relationship between human alteration of the environment and the occurrence of generalist and synanthropic rodent species in relation to the diversity and prevalence of rodent-borne pathogens in Southeast Asia, a hotspot of threatened and endangered species, and a foci of emerging infectious diseases. We used data from an extensive pathogen survey of rodents from seven sites in mainland Southeast Asia in conjunction with past and present land cover analyses. At low spatial resolutions, we found that rodent-borne pathogen richness is negatively associated with increasing urbanization, characterized by increased habitat fragmentation, agriculture cover and deforestation. However, at a finer spatial resolution, we found that some major pathogens are favored by environmental characteristics associated with human alteration including irrigation, habitat fragmentation, and increased agricultural land cover. In addition, synanthropic rodents, many of which are important pathogen reservoirs, were associated with fragmented and human-dominated landscapes, which may ultimately enhance the opportunities for zoonotic transmission and human infection by some pathogens.
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Affiliation(s)
- Serge Morand
- CNRS - CIRAD, Faculty of Veterinary Technology, Kasetsart University, Bangkok, Thailand
- Department of Helminthology, Faculty of Tropical Medicine, Mahidol University, 420/6 Ratchavithi Road, Ratchathevi, Bangkok, 10400, Thailand
| | - Kim Blasdell
- CSIRO Health and Biosecurity Business Unit, Australian Animal Health Laboratory, 5 Portarlington Road, Geelong, Victoria, 3220, Australia
| | - Frédéric Bordes
- Institut des Sciences de l'Evolution, UMR CNRS-IRD-UM2, Université de Montpellier, 35095, Montpellier Cedex, France
| | - Philippe Buchy
- Virology Unit, Institut Pasteur in Cambodia, 5 Monivong Boulevard, Phnom Penh, Cambodia
- GlaxoSmithKline Vaccines, Gateway West, 150 Beach Road, Singapore City, 189720, Singapore
| | - Bernard Carcy
- LBCM/EA4558 VAP, UFR Sciences Pharmaceutiques et Biologiques, Université de Montpellier, Montpellier, France
| | - Kittipong Chaisiri
- Department of Helminthology, Faculty of Tropical Medicine, Mahidol University, 420/6 Ratchavithi Road, Ratchathevi, Bangkok, 10400, Thailand
| | - Yannick Chaval
- Comportement et Ecologie de la Faune Sauvage, INRA, Chemin de Borde Rouge, Auzeville, 31326, Castanet-Tolosan Cedex, France
| | - Julien Claude
- Institut des Sciences de l'Evolution, UMR CNRS-IRD-UM2, Université de Montpellier, 35095, Montpellier Cedex, France
| | - Jean-François Cosson
- BIPAR-INRA Biologie Moléculaire et Immunologie Parasitaires et Fongiques, ENVA Maisons Alfort, 7 Avenue du Général de Gaulle, 94704, Maisons-Alfort Cedex, France
| | - Marc Desquesnes
- Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- CIRAD-Bios, UMR17 InterTryp, Montpellier, F-34000, France
| | | | - Tawisa Jiyipong
- Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- URMITE CNRS INSERM IRD, IHU Méditerranée Infection, Faculté de Médecine et de Pharmacie, Aix-Marseille Université, 27 Bd Jean Moulin, 13385, Marseille Cedex 5, France
| | - Anamika Karnchanabanthoen
- LBCM/EA4558 VAP, UFR Sciences Pharmaceutiques et Biologiques, Université de Montpellier, Montpellier, France
- Faculty of Veterinary Technology, Kasetsart University, Bangkok, Thailand
| | - Pumhom Pornpan
- Department of Parasitology, Faculty of Veterinary Medicine, Kasetsart University, Bangkok, Thailand
- Center for Agricultural Biotechnology, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom, Thailand
| | - Jean-Marc Rolain
- URMITE CNRS INSERM IRD, IHU Méditerranée Infection, Faculté de Médecine et de Pharmacie, Aix-Marseille Université, 27 Bd Jean Moulin, 13385, Marseille Cedex 5, France
| | - Annelise Tran
- CIRAD, UMR TETIS, F-34093, Montpellier, France
- CIRAD, UMR ASTRE, Montpellier, France
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23
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Cheslock MA, Embers ME. Human Bartonellosis: An Underappreciated Public Health Problem? Trop Med Infect Dis 2019; 4:tropicalmed4020069. [PMID: 31010191 PMCID: PMC6630881 DOI: 10.3390/tropicalmed4020069] [Citation(s) in RCA: 70] [Impact Index Per Article: 14.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/24/2019] [Revised: 04/12/2019] [Accepted: 04/16/2019] [Indexed: 12/21/2022] Open
Abstract
Bartonella spp. bacteria can be found around the globe and are the causative agents of multiple human diseases. The most well-known infection is called cat-scratch disease, which causes mild lymphadenopathy and fever. As our knowledge of these bacteria grows, new presentations of the disease have been recognized, with serious manifestations. Not only has more severe disease been associated with these bacteria but also Bartonella species have been discovered in a wide range of mammals, and the pathogens’ DNA can be found in multiple vectors. This review will focus on some common mammalian reservoirs as well as the suspected vectors in relation to the disease transmission and prevalence. Understanding the complex interactions between these bacteria, their vectors, and their reservoirs, as well as the breadth of infection by Bartonella around the world will help to assess the impact of Bartonellosis on public health.
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Affiliation(s)
- Mercedes A Cheslock
- Division of Immunology, Tulane National Primate Research Center, Tulane University Health Sciences, Covington, LA 70433, USA.
| | - Monica E Embers
- Division of Immunology, Tulane National Primate Research Center, Tulane University Health Sciences, Covington, LA 70433, USA.
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24
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Kosoy M, Bai Y. Bartonella Bacteria in Urban Rats: A Movement From the Jungles of Southeast Asia to Metropoles Around the Globe. Front Ecol Evol 2019. [DOI: 10.3389/fevo.2019.00088] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
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25
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Phuentshok Y, Dorji K, Zangpo T, Davidson SA, Takhampunya R, Tenzinla T, Dorjee C, Morris RS, Jolly PD, Dorjee S, McKenzie JS. Survey and Phylogenetic Analysis of Rodents and Important Rodent-Borne Zoonotic Pathogens in Gedu, Bhutan. THE KOREAN JOURNAL OF PARASITOLOGY 2018; 56:521-525. [PMID: 30419740 PMCID: PMC6243181 DOI: 10.3347/kjp.2018.56.5.521] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/27/2017] [Accepted: 09/24/2018] [Indexed: 11/23/2022]
Abstract
Rodents are well-known reservoirs and vectors of many emerging and re-emerging infectious diseases, but little is known about their role in zoonotic disease transmission in Bhutan. In this study, a cross-sectional investigation of zoonotic disease pathogens in rodents was performed in Chukha district, Bhutan, where a high incidence of scrub typhus and cases of acute undifferentiated febrile illness had been reported in people during the preceding 4–6 months. Twelve rodents were trapped alive using wire-mesh traps. Following euthanasia, liver and kidney tissues were removed and tested using PCR for Orientia tsutsugamushi and other bacterial and rickettsial pathogens causing bartonellosis, borreliosis, human monocytic ehrlichiosis, human granulocytic anaplasmosis, leptospirosis, and rickettsiosis. A phylogenetic analysis was performed on all rodent species captured and pathogens detected. Four out of the 12 rodents (33.3%) tested positive by PCR for zoonotic pathogens. Anaplasma phagocytophilum, Bartonella grahamii, and B. queenslandensis were identified for the first time in Bhutan. Leptospira interrogans was also detected for the first time from rodents in Bhutan. The findings demonstrate the presence of these zoonotic pathogens in rodents in Bhutan, which may pose a risk of disease transmission to humans.
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Affiliation(s)
- Yoenten Phuentshok
- One Health Epidemiology Fellowship Program, Massey University, Palmerston North, New Zealand.,National Centre for Animal Health, Department of Livestock, Ministry of Agriculture and Forests, Serbithang, Bhutan
| | - Kezang Dorji
- One Health Epidemiology Fellowship Program, Massey University, Palmerston North, New Zealand
| | - Tandin Zangpo
- One Health Epidemiology Fellowship Program, Massey University, Palmerston North, New Zealand
| | - Silas A Davidson
- Entomology Department, Armed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand
| | - Ratree Takhampunya
- Entomology Department, Armed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand
| | - Tenzinla Tenzinla
- National Centre for Animal Health, Department of Livestock, Ministry of Agriculture and Forests, Serbithang, Bhutan
| | - Chencho Dorjee
- Khesar Gyalpo University of Medical Sciences of Bhutan, Thimphu, Bhutan
| | - Roger S Morris
- MorVet Ltd, Consultancy Services in Health Risk Management and Food Safety Policy, Masterton, New Zealand
| | - Peter D Jolly
- International Development Group, School of Veterinary Science, Massey University, Palmerston North, New Zealand
| | - Sithar Dorjee
- Khesar Gyalpo University of Medical Sciences of Bhutan, Thimphu, Bhutan
| | - Joanna S McKenzie
- International Development Group, School of Veterinary Science, Massey University, Palmerston North, New Zealand
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26
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Corduneanu A, Sándor AD, Ionică AM, Hornok S, Leitner N, Bagó Z, Stefke K, Fuehrer HP, Mihalca AD. Bartonella DNA in heart tissues of bats in central and eastern Europe and a review of phylogenetic relations of bat-associated bartonellae. Parasit Vectors 2018; 11:489. [PMID: 30157912 PMCID: PMC6116555 DOI: 10.1186/s13071-018-3070-7] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2018] [Accepted: 08/20/2018] [Indexed: 01/16/2023] Open
Abstract
Background Bats are among the most widely distributed mammals worldwide and can represent hosts or reservoirs for a number of different pathogens. Bartonella spp. are opportunistic bacterial pathogens, which are transmitted by a large variety of arthropods. The aim of this study was to investigate the presence and host-associations of these Gram-negative bacteria in heart tissues of bats collected in four different countries from eastern and central Europe and to analyze their phylogenetic relationship with other bat-associated bartonellae. Results The results of this study show for the first time the presence of Bartonella spp. DNA in heart tissues of bats from central and eastern Europe. The overall prevalence of the infection was 1.38%. Phylogenetic analysis identified four new Bartonella spp. sequences, which were closely related with other Bartonella previously isolated from bats in Europe and North America. Conclusions The gltA sequences of Bartonella spp. showed considerable heterogeneity in the phylogenetic analysis resulting in six different clades. Our study demonstrated the presence of Bartonella spp. only in heart tissues of bats from Romania, with two new bat species recorded as hosts (Myotis cf. alcathoe and Pipistrellus pipistrellus). Electronic supplementary material The online version of this article (10.1186/s13071-018-3070-7) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Alexandra Corduneanu
- Department of Parasitology and Parasitic Diseases, University of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, Cluj Napoca, Romania
| | - Attila D Sándor
- Department of Parasitology and Parasitic Diseases, University of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, Cluj Napoca, Romania
| | - Angela Monica Ionică
- Department of Parasitology and Parasitic Diseases, University of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, Cluj Napoca, Romania
| | - Sándor Hornok
- Department of Parasitology and Zoology, University of Veterinary Medicine, Budapest, Hungary
| | - Natascha Leitner
- Department of Pathobiology, Institute of Parasitology, University of Veterinary Medicine, Vienna, Austria
| | - Zoltán Bagó
- Institute for Veterinary Disease Control, Austrian Agency for Health and Food Safety (AGES), Mödling, Austria
| | | | - Hans-Peter Fuehrer
- Department of Pathobiology, Institute of Parasitology, University of Veterinary Medicine, Vienna, Austria
| | - Andrei Daniel Mihalca
- Department of Parasitology and Parasitic Diseases, University of Agricultural Sciences and Veterinary Medicine of Cluj-Napoca, Cluj Napoca, Romania.
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Takhampunya R, Korkusol A, Promsathaporn S, Tippayachai B, Leepitakrat S, Richards AL, Davidson SA. Heterogeneity of Orientia tsutsugamushi genotypes in field-collected trombiculid mites from wild-caught small mammals in Thailand. PLoS Negl Trop Dis 2018; 12:e0006632. [PMID: 30011267 PMCID: PMC6062101 DOI: 10.1371/journal.pntd.0006632] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2018] [Revised: 07/26/2018] [Accepted: 06/22/2018] [Indexed: 12/30/2022] Open
Abstract
Trombiculid mites are the vectors of scrub typhus, with infected larval mites (chiggers) transmitting the causative agent, Orientia tsutsugamushi, during feeding. Co-existence of multiple O. tsutsugamushi strains within infected mites has previously been reported in naturally infected, laboratory-reared mite lines using molecular methods to characterize the 56-kDa type-specific antigen (TSA) gene. In the current study, more advanced next-generation sequencing technology was used to reveal the heterogeneity of O. tsutsugamushi genotypes in field-collected trombiculid mites from rodents and small mammals in scrub typhus-endemic areas of Thailand. Twenty-eight trombiculid mites collected from 10 small mammals were positive for O. tsutsugamushi, corresponding to a prevalence rate of 0.7% within the mite population. Twenty-four of the infected mites were Leptotrombidium spp., indicating that this genus is the main vector for O. tsutsugamushi transmission in Thailand. In addition, O. tsutsugamushi was detected in the mite genera Ascoschoengastia, Blankaartia, Gahrliepia, and Lorillatum. Of the 10 infested small animal hosts, six had 2-10 infected mites feeding at the time of collection. Deep sequencing was used to characterize mixed infections (two to three O. tsutsugamushi genotypes within an individual mite), and 5 of the 28 infected mites (17.9%) contained mixed infections. Additionally, 56-kDa TSA gene sequence analysis revealed identical bacterial genotypes among co-feeding mites with single or mixed infections. These results suggest that co-feeding transmission may occur during the feeding process, and could explain the occurrence of mixed infections in individual mites, as well as the recovery of multiple infected mites from the same host. This study also revealed highly diverse within-host O. tsutsugamushi genotypes. The occurrence of multiple O. tsutsugamushi genotypes within individual mites has important implications, and could provide a mechanism for pathogen evolution/diversification in the mite vector.
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Affiliation(s)
- Ratree Takhampunya
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
| | - Achareeya Korkusol
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
| | - Sommai Promsathaporn
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
| | - Bousaraporn Tippayachai
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
| | - Surachai Leepitakrat
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
| | - Allen L. Richards
- Viral and Rickettsial Diseases Department, Naval Medical Research Center, Silver Spring, Maryland, United States of America
| | - Silas A. Davidson
- Department of Entomology, Armed Forces Research Institute of Medical Sciences-United States Army Medical Directorate, Bangkok, Thailand
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Šlapeta J, Lawrence A, Reichel MP. Cat fleas (Ctenocephalides felis) carrying Rickettsia felis and Bartonella species in Hong Kong. Parasitol Int 2017; 67:209-212. [PMID: 29217417 DOI: 10.1016/j.parint.2017.12.001] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2017] [Revised: 10/20/2017] [Accepted: 12/04/2017] [Indexed: 12/01/2022]
Abstract
Fleas are commonly recorded on stray as well as domestic dogs and cats in Hong Kong. Fleas can be a major cause of pruritus in dogs and cats and also vectors of potentially zoonotic bacteria in the genera Rickettsia and Bartonella. Morphological examination of 174 fleas from dogs and cats living in Hong Kong revealed only cat fleas (Ctenocephalides felis). Cytochrome c oxidase subunit 1 gene (cox1) genotyping of 20 randomly selected specimens, revealed three cox1 haplotypes (HK-h1 to HK-h3). The most common haplotype was HK-h1 with 17 specimens (17/20, 85%). HK-h1 was identical to cox1 sequences of fleas in Thailand and Fiji. HK-h1 and HK-h2 form a distinct cat flea cox1 clade previously recognized as the Clade 3. HK-h3 forms a new Clade 6. A multiplex Bartonella and Rickettsia real-time PCR of DNA from 20 C. felis found Bartonella and Rickettsia DNA in three (15%) and ten (50%) C. felis, respectively. DNA sequencing confirmed the presence of R. felis, B. clarridgeiae and Bartonella henselae. This is the first reported study of that kind in Hong Kong, and further work is required to expand the survey of companion animals in the geographical region. The sampling of fleas on domestic cats and dogs in Hong Kong revealed them to be exclusively infested by the cat flea and to be harbouring pathogens of zoonotic potential.
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Affiliation(s)
- Jan Šlapeta
- Sydney School of Veterinary Science, Faculty of Science, University of Sydney, Sydney, New South Wales 2006, Australia.
| | - Andrea Lawrence
- Sydney School of Veterinary Science, Faculty of Science, University of Sydney, Sydney, New South Wales 2006, Australia; Marie Bashir Institute of Infectious Diseases and Biosecurity, University of Sydney, Sydney, New South Wales 2006, Australia
| | - Michael P Reichel
- College of Veterinary Medicine and Life Sciences, City University of Hong Kong, Tat Chee Avenue, Kowloon Tong, Hong Kong SAR, China.
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Hubert J, Erban T, Kopecky J, Sopko B, Nesvorna M, Lichovnikova M, Schicht S, Strube C, Sparagano O. Comparison of Microbiomes between Red Poultry Mite Populations (Dermanyssus gallinae): Predominance of Bartonella-like Bacteria. MICROBIAL ECOLOGY 2017; 74:947-960. [PMID: 28534089 DOI: 10.1007/s00248-017-0993-z] [Citation(s) in RCA: 29] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/23/2017] [Accepted: 05/01/2017] [Indexed: 05/09/2023]
Abstract
Blood feeding red poultry mites (RPM) serve as vectors of pathogenic bacteria and viruses among vertebrate hosts including wild birds, poultry hens, mammals, and humans. The microbiome of RPM has not yet been studied by high-throughput sequencing. RPM eggs, larvae, and engorged adult/nymph samples obtained in four poultry houses in Czechia were used for microbiome analyses by Illumina amplicon sequencing of the 16S ribosomal RNA (rRNA) gene V4 region. A laboratory RPM population was used as positive control for transcriptome analysis by pyrosequencing with identification of sequences originating from bacteria. The samples of engorged adult/nymph stages had 100-fold more copies of 16S rRNA gene copies than the samples of eggs and larvae. The microbiome composition showed differences among the four poultry houses and among observed developmental stadia. In the adults' microbiome 10 OTUs comprised 90 to 99% of all sequences. Bartonella-like bacteria covered between 30 and 70% of sequences in RPM microbiome and 25% bacterial sequences in transcriptome. The phylogenetic analyses of 16S rRNA gene sequences revealed two distinct groups of Bartonella-like bacteria forming sister groups: (i) symbionts of ants; (ii) Bartonella genus. Cardinium, Wolbachia, and Rickettsiella sp. were found in the microbiomes of all tested stadia, while Spiroplasma eriocheiris and Wolbachia were identified in the laboratory RPM transcriptome. The microbiomes from eggs, larvae, and engorged adults/nymphs differed. Bartonella-like symbionts were found in all stadia and sampling sites. Bartonella-like bacteria was the most diversified group within the RPM microbiome. The presence of identified putative pathogenic bacteria is relevant with respect to human and animal health issues while the identification of symbiontic bacteria can lead to new control methods targeting them to destabilize the arthropod host.
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Affiliation(s)
- Jan Hubert
- Crop Research Institute, Drnovska 507/73, Prague 6-Ruzyne, 161 06, Czechia.
| | - Tomas Erban
- Crop Research Institute, Drnovska 507/73, Prague 6-Ruzyne, 161 06, Czechia
| | - Jan Kopecky
- Crop Research Institute, Drnovska 507/73, Prague 6-Ruzyne, 161 06, Czechia
| | - Bruno Sopko
- Crop Research Institute, Drnovska 507/73, Prague 6-Ruzyne, 161 06, Czechia
- Department of Medical Chemistry and Clinical Biochemistry, 2nd Faculty of Medicine, Charles University and Motol University Hospital, V Uvalu 84/1, Prague, 5150 06, Czechia
| | - Marta Nesvorna
- Crop Research Institute, Drnovska 507/73, Prague 6-Ruzyne, 161 06, Czechia
| | - Martina Lichovnikova
- Faculty of AgriSciences, Mendel University in Brno, Zemedelska 1665/1, Brno, 61 300, Czechia
| | - Sabine Schicht
- Institute for Parasitology, Centre for Infection Medicine, University of Veterinary Medicine Hannover, Buenteweg 17, 30559, Hannover, Germany
| | - Christina Strube
- Institute for Parasitology, Centre for Infection Medicine, University of Veterinary Medicine Hannover, Buenteweg 17, 30559, Hannover, Germany
| | - Olivier Sparagano
- Vice-Chancellor Office, Centre for Applied Biological and Exercise Sciences, Coventry University, Priory Street, Coventry, CV1 5FB, UK
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Genotyping ofBartonellabacteria and their animal hosts: current status and perspectives. Parasitology 2017; 145:543-562. [DOI: 10.1017/s0031182017001263] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022]
Abstract
SUMMARYGrowing evidence demonstrates that bacterial species diversity is substantial, and many of these species are pathogenic in some contexts or hosts. At the same time, laboratories and museums have collected valuable animal tissue and ectoparasite samples that may contain substantial novel information on bacterial prevalence and diversity. However, the identification of bacterial species is challenging, partly due to the difficulty in culturing many microbes and the reliance on molecular data. Although the genomics revolution will surely add to our knowledge of bacterial systematics, these approaches are not accessible to all researchers and rely predominantly on cultured isolates. Thus, there is a need for comprehensive molecular analyses capable of accurately genotyping bacteria from animal tissues or ectoparasites using common methods that will facilitate large-scale comparisons of species diversity and prevalence. To illustrate the challenges of genotyping bacteria, we focus on the genusBartonella, vector-borne bacteria common in mammals. We highlight the value and limitations of commonly used techniques for genotyping bartonellae and make recommendations for researchers interested in studying the diversity of these bacteria in various samples. Our recommendations could be applicable to many bacterial taxa (with some modifications) and could lead to a more complete understanding of bacterial species diversity.
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McKee CD, Kosoy MY, Bai Y, Osikowicz LM, Franka R, Gilbert AT, Boonmar S, Rupprecht CE, Peruski LF. Diversity and phylogenetic relationships among Bartonella strains from Thai bats. PLoS One 2017; 12:e0181696. [PMID: 28727827 PMCID: PMC5519213 DOI: 10.1371/journal.pone.0181696] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2017] [Accepted: 07/04/2017] [Indexed: 11/25/2022] Open
Abstract
Bartonellae are phylogenetically diverse, intracellular bacteria commonly found in mammals. Previous studies have demonstrated that bats have a high prevalence and diversity of Bartonella infections globally. Isolates (n = 42) were obtained from five bat species in four provinces of Thailand and analyzed using sequences of the citrate synthase gene (gltA). Sequences clustered into seven distinct genogroups; four of these genogroups displayed similarity with Bartonella spp. sequences from other bats in Southeast Asia, Africa, and Eastern Europe. Thirty of the isolates representing these seven genogroups were further characterized by sequencing four additional loci (ftsZ, nuoG, rpoB, and ITS) to clarify their evolutionary relationships with other Bartonella species and to assess patterns of diversity among strains. Among the seven genogroups, there were differences in the number of sequence variants, ranging from 1-5, and the amount of nucleotide divergence, ranging from 0.035-3.9%. Overall, these seven genogroups meet the criteria for distinction as novel Bartonella species, with sequence divergence among genogroups ranging from 6.4-15.8%. Evidence of intra- and intercontinental phylogenetic relationships and instances of homologous recombination among Bartonella genogroups in related bat species were found in Thai bats.
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Affiliation(s)
- Clifton D. McKee
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, United States of America
- Department of Biology, Colorado State University, Fort Collins, CO, United States of America
| | - Michael Y. Kosoy
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, United States of America
| | - Ying Bai
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, United States of America
| | - Lynn M. Osikowicz
- Division of Vector-Borne Diseases, Centers for Disease Control and Prevention, Fort Collins, CO, United States of America
| | - Richard Franka
- Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, GA, United States of America
| | - Amy T. Gilbert
- Division of High-Consequence Pathogens and Pathology, Centers for Disease Control and Prevention, Atlanta, GA, United States of America
- National Wildlife Research Center, USDA/APHIS/Wildlife Services, Fort Collins, CO, United States of America
| | - Sumalee Boonmar
- Faculty Sciences and Public Health, Rajapruk University, Nonthaburi, Thailand
| | | | - Leonard F. Peruski
- Center for Global Health, Centers for Disease Control and Prevention, Atlanta, GA, United States of America
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Association of Bartonella Species with Wild and Synanthropic Rodents in Different Brazilian Biomes. Appl Environ Microbiol 2016; 82:7154-7164. [PMID: 27736785 DOI: 10.1128/aem.02447-16] [Citation(s) in RCA: 39] [Impact Index Per Article: 4.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Accepted: 09/27/2016] [Indexed: 02/03/2023] Open
Abstract
Bartonella spp. comprise an ecologically successful group of microorganisms that infect erythrocytes and have adapted to different hosts, which include a wide range of mammals, besides humans. Rodents are reservoirs of about two-thirds of Bartonella spp. described to date; and some of them have been implicated as causative agents of human diseases. In our study, we performed molecular and phylogenetic analyses of Bartonella spp. infecting wild rodents from five different Brazilian biomes. In order to characterize the genetic diversity of Bartonella spp., we performed a robust analysis based on three target genes, followed by sequencing, Bayesian inference, and maximum likelihood analysis. Bartonella spp. were detected in 25.6% (117/457) of rodent spleen samples analyzed, and this occurrence varied among different biomes. The diversity analysis of gltA sequences showed the presence of 15 different haplotypes. Analysis of the phylogenetic relationship of gltA sequences performed by Bayesian inference and maximum likelihood showed that the Bartonella species detected in rodents from Brazil was closely related to the phylogenetic group A detected in other cricetid rodents from North America, probably constituting only one species. Last, the Bartonella species genogroup identified in the present study formed a monophyletic group that included Bartonella samples from seven different rodent species distributed in three distinct biomes. In conclusion, our study showed that the occurrence of Bartonella bacteria in rodents is much more frequent and widespread than previously recognized. IMPORTANCE In the present study, we reported the occurrence of Bartonella spp. in some sites in Brazil. The identification and understanding of the distribution of this important group of bacteria may allow the Brazilian authorities to recognize potential regions with the risk of transmission of these pathogens among wild and domestic animals and humans. In addition, our study accessed important gaps in the biology of this group of bacteria in Brazil, such as its low host specificity, high genetic diversity, and relationship with other Bartonella spp. detected in rodents trapped in America. Considering the diversity of newly discovered Bartonella species and the great ecological plasticity of these bacteria, new studies with the aim of revealing the biological aspects unknown until now are needed and must be performed around the world. In this context, the impact of Bartonella spp. associated with rodents in human health should be assessed in future studies.
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Zurita A, Gutiérrez SG, Cutillas C. Infection Rates of Wolbachia sp. and Bartonella sp. in Different Populations of Fleas. Curr Microbiol 2016; 73:704-713. [DOI: 10.1007/s00284-016-1119-4] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Accepted: 07/13/2016] [Indexed: 11/24/2022]
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