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Borges CE, Von Dos Santos Veloso R, da Conceição CA, Mendes DS, Ramirez-Cabral NY, Shabani F, Shafapourtehrany M, Nery MC, da Silva RS. Forecasting Brassica napus production under climate change with a mechanistic species distribution model. Sci Rep 2023; 13:12656. [PMID: 37542082 PMCID: PMC10403512 DOI: 10.1038/s41598-023-38910-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2023] [Accepted: 07/17/2023] [Indexed: 08/06/2023] Open
Abstract
Brassica napus, a versatile crop with significant socioeconomic importance, serves as a valuable source of nutrition for humans and animals while also being utilized in biodiesel production. The expansion potential of B. napus is profoundly influenced by climatic variations, yet there remains a scarcity of studies investigating the correlation between climatic factors and its distribution. This research employs CLIMEX to identify the current and future ecological niches of B. napus under the RCP 8.5 emission scenario, utilizing the Access 1.0 and CNRM-CM5 models for the time frame of 2040-2059. Additionally, a sensitivity analysis of parameters was conducted to determine the primary climatic factors affecting B. napus distribution and model responsiveness. The simulated outcomes demonstrate a satisfactory alignment with the known current distribution of B. napus, with 98% of occurrence records classified as having medium to high climatic suitability. However, the species displays high sensitivity to thermal parameters, thereby suggesting that temperature increases could trigger shifts in suitable and unsuitable areas for B. napus, impacting regions such as Canada, China, Brazil, and the United States.
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Affiliation(s)
- Cláudia Eduarda Borges
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
| | - Ronnie Von Dos Santos Veloso
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
| | - Crislaine Alves da Conceição
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
| | - Débora Sampaio Mendes
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
| | - Nadiezhda Yz Ramirez-Cabral
- Ecosystem Management, School of Environmental and Rural Science, University of New England, Armidale, NSW, 2351, Australia
- INIFAP, Campo Experimental Zacatecas, Km, 24.5 Carretera Zacatecas-Fresnillo, 98500, Calera de V.R., ZAC, Mexico
| | - Farzin Shabani
- Department of Biological and Environmental Sciences, College of Arts and Sciences, Qatar University, P.O. Box 2713, Doha, Qatar.
| | - Mahyat Shafapourtehrany
- Kandilli Observatory and Earthquake Research Institute, Department of Geodesy, Bogazici University, 34680, Cengelkoy, Istanbul, Turkey
| | - Marcela Carlota Nery
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
| | - Ricardo Siqueira da Silva
- Universidade Federal dos Vales Jequitinhonha e Mucuri, Campus JK, Rodovia MGT 367 - Km 583, nº 5.000, Alto da Jacuba, Diamantina, MG, CEP 39100-000, Brazil
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Bora SS, Dullah S, Dey KK, Hazarika DJ, Sarmah U, Sharma D, Goswami G, Singh NR, Barooah M. Additive-induced pH determines bacterial community composition and metabolome in traditional mustard seed fermented products. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.1006573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022] Open
Abstract
IntroductionKahudi and Kharoli are unique naturally fermented mustard seed products prepared and consumed in the northeastern region of India. The pre-fermentation processing of mustard seeds (soaking, pan-frying, mixing with alkaline or acidic additives, airtight packaging) renders a stringent fermentation environment. The metabolic activities of fermenting bacterial populations yield a myriad of glucosinolate-derived bioactive components which have not been described earlier.MethodsThis present study employed integrated 16S rRNA amplicon sequencing and LC-MS-based metabolomics to elucidate the bacterial diversity and metabolome of the two fermented mustard seed food products.Results and DiscussionUnivariate and multivariate analyses of metabolomics data revealed differential abundances of a few therapeutically-important metabolites viz., sinapine, indole-3-carbinol, γ-linolenic acid in Kahudi, and metabolites viz., β-sitosterol acetate, 3-butylene glucosinolate, erucic acid in Kharoli. A metagenomic investigation involving the 16S rRNA (V3–V4) amplicon sequencing showed the dominance of Firmicutes (99.1 ± 0.18%) in Kahudi, and Firmicutes (79.6 ± 1.92%) and Proteobacteria (20.37 ± 1.94%) in Kharoli. The most abundant genera were Bacillus (88.7 ± 1.67% in Kahudi; 12.5 ± 1.75% in Kharoli) followed by Lysinibacillus (67.1 ± 2.37% in Kharoli; 10.4 ± 1.74% in Kahudi). Members of both these genera are well known for proteolytic and endospore-forming abilities which could have helped in colonizing and thriving in the stringent fermentation environments.
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Jian L, Yan J, Liu J. De Novo Domestication in the Multi-Omics Era. PLANT & CELL PHYSIOLOGY 2022; 63:1592-1606. [PMID: 35762778 DOI: 10.1093/pcp/pcac077] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/14/2022] [Accepted: 06/27/2022] [Indexed: 06/15/2023]
Abstract
Most cereal crops were domesticated within the last 12,000 years and subsequently spread around the world. These crops have been nourishing the world by supplying a primary energy and nutrient source, thereby playing a critical role in determining the status of human health and sustaining the global population. Here, we review the major challenges of future agriculture and emphasize the utilization of wild germplasm. De novo domestication is one of the most straightforward strategies to manipulate domestication-related and/or other genes with known function, and thereby introduce desired traits into wild plants. We also summarize known causal variations and their corresponding pathways in order to better understand the genetic basis of crop evolution, and how this knowledge could facilitate de novo domestication. Indeed knowledge-driven de novo domestication has great potential for the development of new sustainable crops that have climate-resilient high yield with low resource input and meet individual nutrient needs. Finally, we discuss current opportunities for and barriers to knowledge-driven de novo domestication.
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Affiliation(s)
- Liumei Jian
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
| | - Jianbing Yan
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
- Hubei Hongshan Laboratory, Wuhan 430070, China
| | - Jie Liu
- National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan 430070, China
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Does Climate Change Affect Rapeseed Production in Exporting and Importing Countries? Evidence from Market Dynamics Syntheses. SUSTAINABILITY 2022. [DOI: 10.3390/su14106051] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Globally, non-cereal crops such as vegetable oils and their associated products will surpass cereals in demand by 2050, according to the World Bank (WB). Despite being considered an energy-efficient food crop, the production and supply capability of rapeseed is mostly influenced by climate conditions. Aiming in this context, the study explored how temperature and rainfall patterns influence rapeseed production, as well as how rapeseed prices in major trading countries may influence production and consumption patterns in developing countries. To do this, a supply and demand model approach has been employed for major exporting (Canada) and importing countries, i.e., China, the United States (U.S.) along with Bangladesh, a developing nation. The baseline study period was considered from 1991 to 2018, and simulations were performed up to 2040. The findings revealed that the most important effect on rapeseed yield is directly related to changes in temperature, which are positively related to the growing season but negatively related to the maturity stages of rapeseed in all studied countries. Rapeseed exports from Canada are expected to rise by 2040, while imports from China and the U.S. will rise simultaneously. In Canada, the per capita consumption of rapeseed oil is expected to increase from 16 to 24 kg per year between 2019 and 2040. Over the projection period, oil per capita consumption has steadily increased in China, the U.S., and Bangladesh. The relative demand for rapeseed oil is projected to increase by 2060, according to representative concentration pathways (RCPs). Therefore, it is necessary to determine market prices considering the probable climatic effect and increasing market demand for rapeseed to sustain the international market access of trading nations.
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Lohani N, Singh MB, Bhalla PL. RNA-Seq Highlights Molecular Events Associated With Impaired Pollen-Pistil Interactions Following Short-Term Heat Stress in Brassica napus. FRONTIERS IN PLANT SCIENCE 2021; 11:622748. [PMID: 33584763 PMCID: PMC7872974 DOI: 10.3389/fpls.2020.622748] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Accepted: 12/08/2020] [Indexed: 05/09/2023]
Abstract
The global climate change is leading to increased frequency of heatwaves with crops getting exposed to extreme temperature events. Such temperature spikes during the reproductive stage of plant development can harm crop fertility and productivity. Here we report the response of short-term heat stress events on the pollen and pistil tissues in a commercially grown cultivar of Brassica napus. Our data reveals that short-term temperature spikes not only affect pollen fitness but also impair the ability of the pistil to support pollen germination and pollen tube growth and that the heat stress sensitivity of pistil can have severe consequences for seed set and yield. Comparative transcriptome profiling of non-stressed and heat-stressed (40°C for 30 min) pollen and pistil (stigma + style) highlighted the underlying cellular mechanisms involved in heat stress response in these reproductive tissues. In pollen, cell wall organization and cellular transport-related genes possibly regulate pollen fitness under heat stress while the heat stress-induced repression of transcription factor encoding transcripts is a feature of the pistil response. Overall, high temperature altered the expression of genes involved in protein processing, regulation of transcription, pollen-pistil interactions, and misregulation of cellular organization, transport, and metabolism. Our results show that short episodes of high-temperature exposure in B. napus modulate key regulatory pathways disrupted reproductive processes, ultimately translating to yield loss. Further investigations on the genes and networks identified in the present study pave a way toward genetic improvement of the thermotolerance and reproductive performance of B. napus varieties.
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Affiliation(s)
| | | | - Prem L. Bhalla
- Plant Molecular Biology and Biotechnology Laboratory, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, VIC, Australia
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Zhang F, Batley J. Exploring the application of wild species for crop improvement in a changing climate. CURRENT OPINION IN PLANT BIOLOGY 2020; 56:218-222. [PMID: 32029361 DOI: 10.1016/j.pbi.2019.12.013] [Citation(s) in RCA: 30] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/01/2019] [Revised: 12/27/2019] [Accepted: 12/27/2019] [Indexed: 06/10/2023]
Abstract
Modern agriculture is currently facing challenges from a burgeoning population and changing climate, which requires improved crops with adaptation to climate and elite yield and quality traits. While there is a breeding bottleneck caused by intensive selection, gene banks containing conserved wild relatives and landraces can be used as breeding resources. However, with limited genetic information available on these wild relatives, the application has been hindered. With the development of both genomics and bioinformatics techniques, it is now easier to identify the genetic variation in wild species, which can be utilized for the introgression of elite traits. These wild species can therefore play an important role in food security and breeding sustainability.
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Affiliation(s)
- Fangning Zhang
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Crawley 6009, Australia
| | - Jacqueline Batley
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Crawley 6009, Australia.
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Mitrović PM, Stamenković OS, Banković-Ilić I, Djalović IG, Nježić ZB, Farooq M, Siddique KHM, Veljković VB. White Mustard ( Sinapis alba L.) Oil in Biodiesel Production: A Review. FRONTIERS IN PLANT SCIENCE 2020; 11:299. [PMID: 32300349 PMCID: PMC7142246 DOI: 10.3389/fpls.2020.00299] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2019] [Accepted: 02/28/2020] [Indexed: 05/07/2023]
Abstract
White mustard (Sinapis alba L.) seed oil is used for cooking, food preservation, body and hair revitalization, biodiesel production, and as a diesel fuel additive and alternative biofuel. This review focuses on biodiesel production from white mustard seed oil as a feedstock. The review starts by outlining the botany and cultivation of white mustard plants, seed harvest, drying and storage, and seed oil composition and properties. This is followed by white mustard seed pretreatments (shelling, preheating, and grinding) and processing techniques for oil recovery (pressing, solvent extraction, and steam distillation) from whole seeds, ground seed or kernels, and press cake. Novel technologies, such as aqueous, enzyme-assisted aqueous, supercritical CO2, and ultrasound-assisted solvent extraction, are also discussed. The main part of the review considers biodiesel production from white mustard seed oil, including fuel properties and performance. The economic, environmental, social, and human health risk/toxicological impacts of white mustard-based biodiesel production and use are also discussed.
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Affiliation(s)
| | | | | | | | - Zvonko B. Nježić
- Institute of Food Technology, University of Novi Sad, Novi Sad, Serbia
| | - Muhammad Farooq
- Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, Al-Khoud, Oman
- Department of Agronomy, University of Agriculture, Faisalabad, Faisalabad, Pakistan
- UWA School of Agriculture and Environment, The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, Australia
| | - Kadambot H. M. Siddique
- UWA School of Agriculture and Environment, The UWA Institute of Agriculture, The University of Western Australia, Perth, WA, Australia
| | - Vlada B. Veljković
- Faculty of Technology, University of Niš, Leskovac, Serbia
- Serbian Academy of Sciences and Arts, Belgrade, Serbia
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Martínez‐Núñez C, Manzaneda AJ, Isla J, Tarifa R, Calvo G, Molina JL, Salido T, Ruiz C, Gutiérrez JE, Rey PJ. Low‐intensity management benefits solitary bees in olive groves. J Appl Ecol 2019. [DOI: 10.1111/1365-2664.13511] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Carlos Martínez‐Núñez
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | - Antonio J. Manzaneda
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | - Jorge Isla
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | - Rubén Tarifa
- Estación Experimental de Zonas Áridas Almería Spain
| | - Gemma Calvo
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | - José L. Molina
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | - Teresa Salido
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
| | | | | | - Pedro J. Rey
- Department of Biología Animal Biología Vegetal y Ecología Universidad de Jaén Jaén Spain
- Instituto Interuniversitario del Sistema Tierra de Andalucía Universidad de Jaén Jaén Spain
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