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Agarwal A, Martoni F, Eow L, Rodoni BC, Blacket MJ. LAMP assay for the detection of the Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Psylloidea: Psyllidae). Sci Rep 2023; 13:10895. [PMID: 37407637 DOI: 10.1038/s41598-023-37721-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/23/2022] [Accepted: 06/26/2023] [Indexed: 07/07/2023] Open
Abstract
Diaphorina citri Kuwayama, also known as the Asian citrus psyllid (ACP), can vector the bacterium Candidatus Liberibacter asiaticus (CLas), agent of Huanglongbing (HLB): an incurable disease affecting citrus trees worldwide. In citrus growing regions where ACP and HLB are absent, such as Australia, the risk of an incursion and consequent economic damage to citrus industries make this psyllid one of the top-priority pests. Due to ACP's small dimensions and the generally poorly studied native psylloid fauna worldwide, morphological identification of this insect to distinguish it from harmless species is challenging, especially in the field, and with immature, partial or damaged specimens. To allow rapid and efficient detection of ACP in the field, we designed and optimised a new Loop-mediated isothermal amplification (LAMP) assay for the detection of D. citri based on the mitochondrial 16S locus. The optimised ACP 16S LAMP assay produced amplification from D. citri samples within 13.3 ± 3.6 min, with an anneal derivative of ~ 78.5 °C. A synthetic gBlock gene fragment was also developed to be used as positive control for the new LAMP assay with a different anneal derivative of ~ 83 °C. An existing commercially available LAMP assay for detection of the bacterium CLas was also tested in this study on ACP DNA. The ACP 16S LAMP assay we developed and tested here provides a valuable new in-field compatible tool that can allow early detections of ACP, enabling a quick biosecurity response, and could potentially be adopted by a wide range of users, from farmers to agronomists and from researchers to industry.
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Affiliation(s)
- Arati Agarwal
- Agriculture Victoria Research, AgriBio - Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC, 3083, Australia
| | - Francesco Martoni
- Agriculture Victoria Research, AgriBio - Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC, 3083, Australia
| | - Lixin Eow
- Agriculture Victoria Research, AgriBio - Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC, 3083, Australia
| | - Brendan C Rodoni
- Agriculture Victoria Research, AgriBio - Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC, 3083, Australia
- School of Applied Systems Biology, La Trobe University, Bundoora, VIC, 3083, Australia
| | - Mark J Blacket
- Agriculture Victoria Research, AgriBio - Centre for AgriBioscience, 5 Ring Road, Bundoora, VIC, 3083, Australia.
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Aristeidou M, Herodotou C, Ballard HL, Young AN, Miller AE, Higgins L, Johnson RF. Exploring the participation of young citizen scientists in scientific research: The case of iNaturalist. PLoS One 2021; 16:e0245682. [PMID: 33465161 PMCID: PMC7815142 DOI: 10.1371/journal.pone.0245682] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Accepted: 01/05/2021] [Indexed: 11/24/2022] Open
Abstract
Online citizen science projects have broadened options for accessing science and enabled different forms of participation in scientific research for adult and young volunteers. Yet, little is known regarding participation patterns among youth participants. Quantitative approaches were used to investigate the contribution of 183 young volunteers to citizen science on the iNaturalist platform and the participation behaviour that relates to their contribution. The participants accessed and used iNaturalist as part of one-day field-based events (bioblitzes) facilitated by museums. Compared to the observation behaviour of all iNaturalist users, as documented on the platform, the young volunteers observe fewer plants and birds, and more molluscs, arachnids and insects. The average daily contributions of young volunteers were found to be positively associated with a large proportion of active days on iNaturalist and a systematic contribution behaviour, yet negatively related to a long duration on the platform. This study enhances our understanding of young volunteers' contributions to citizen science and provides insights for research on participation in online citizen science. Our findings have implications on how museums design the field-based events to encourage follow-up systematic participation and maintain active contribution.
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Affiliation(s)
- Maria Aristeidou
- Institute of Educational Technology, The Open University, Milton Keynes, Buckinghamshire, United Kingdom
| | - Christothea Herodotou
- Institute of Educational Technology, The Open University, Milton Keynes, Buckinghamshire, United Kingdom
| | - Heidi L. Ballard
- Center for Community and Citizen Science, UC Davis School of Education, University of California Davis, Davis, California, United States of America
| | - Alison N. Young
- California Academy of Sciences, San Francisco, California, United States of America
| | - Annie E. Miller
- California Academy of Sciences, San Francisco, California, United States of America
| | - Lila Higgins
- Natural History Museum of Los Angeles County, Los Angeles, California, United States of America
| | - Rebecca F. Johnson
- California Academy of Sciences, San Francisco, California, United States of America
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Illuminating Insights into the Biodiversity of the Australian Psyllids (Hemiptera: Psylloidea) Collected Using Light Trapping. INSECTS 2020; 11:insects11060354. [PMID: 32517030 PMCID: PMC7348819 DOI: 10.3390/insects11060354] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 05/19/2020] [Revised: 06/03/2020] [Accepted: 06/03/2020] [Indexed: 11/16/2022]
Abstract
The superfamily Psylloidea includes numerous species which play a key role in Australian ecology and biodiversity, as well as pests and biological control agents, and sometimes threatened species of conservation concern. Different psyllid sampling and collection techniques are usually performed depending on the nature and aim of the study: from the beating and sweeping of psyllid host plants for conservation and biodiversity assessment, to suction and sticky traps in agriculture. Due to a general lack of information on its efficacy for psyllids, however, light trapping has not usually been employed. Here we present the results obtained trapping psyllids using different light sources and we discuss the strengths and weaknesses of this technique to assess psyllid biodiversity. In particular, we highlight the strength of using this methodology paired with DNA barcoding, to cast some light on psyllid biodiversity. The results obtained here suggest that the psyllid fauna of Australia is heavily understudied and the number of undescribed species might be many times higher than previously expected. Additionally, we report, for the first time, the species Trioza adventicia Tuthill 1952, and Cryptoneossa triangula Taylor 1990 in the state of Queensland.
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Martoni F, Armstrong K. Resolving an 87-year-old taxonomical curiosity with the description of Psylla frodobagginsi sp. nov. (Hemiptera: Sternorrhyncha: Psyllidae), a second distinct Psylla species on the New Zealand endemic plant kōwhai. PLoS One 2019; 14:e0221316. [PMID: 31532775 PMCID: PMC6750570 DOI: 10.1371/journal.pone.0221316] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Accepted: 08/04/2019] [Indexed: 11/19/2022] Open
Abstract
A recent DNA-based assessment of the psyllid fauna of New Zealand recorded high genetic variation between populations that were expected to belong to the same psyllid species. Among these, a number of populations of the kōwhai psyllid Psylla apicalis (Ferris & Klyver, 1932), from a kōwhai species, Sophora microphylla Aiton (Fabaceae), presented high genetic variability. This gave new endorsement of an 87-year-old observation made by the entomologists Ferris and Klyver who, when describing the kōwhai psyllid, from Sophora tetraptera J.S. Muell., suggested that morphological variations could support more than one species. Accordingly, the morphological assessment conducted here, together with the genetic information now available, resulted in the description of Psylla frodobagginsi sp. nov. as a second New Zealand endemic psyllid species hosted by S. microphylla.
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Affiliation(s)
- Francesco Martoni
- Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
- * E-mail:
| | - Karen Armstrong
- Bio-Protection Research Centre, Lincoln University, Lincoln, New Zealand
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