Assessing precision and requirements of three methods to estimate roe deer density

Diverging ecological traits between the Balkan lynx and neighbouring populations as a basis for planning its genetic rescue

Selecting appropriate candidates for genetic rescue mostly relies on previous genetic research and monitoring, while ecological and behavioural traits of the remnant and source populations are rarely considered for such conservation measures. Because of their slow recovery, Eurasian lynx Lynx lynx populations in Central and Western Europe have been a repeated target of genetic reinforcements and reintroductions in the past 50 years. Once inhabiting much of south-eastern Europe, the Balkan lynx L. l. balcanicus is now critically endangered and confined to a small population. Long-term isolation has caused loss of genetic diversity and has possibly led to inbreeding depression. Immediate actions need to consider genetic reinforcement to increase the genetic diversity and secure population viability. Here, we compared the Balkan lynx with two neighbouring populations: Dinaric population originating from the Carpathian subspecies (L.l. carpathicus) and Anatolian population of Caucasian subspecies (L.l. dinniki) to determine is better suited source from an ecological standpoint. Main findings suggest that the L.l. carpathicus is ecologically more similar to the L.l. balcanicus and therefore likely better suited for the environment of south-western Balkans on the basis of prey preference (roe deer being the main prey), local prey availability (lower lagomorph and higher ungulate availability) and habitat use (predominant use of the mixed and broadleaved forests). We discuss the contrasting results of genetic and ecological analyses from both the evolutionary and conservation perspective and provide potential solutions that would take into account both aspects to pave the road towards potential genetic rescue of the Balkan lynx.

Sampling scale and season influence the observed relationship between the density of deer and questing Ixodes ricinus nymphs

Background

The relationship between environmentally transmitted tick parasites, Ixodes spp., and their main reproductive host, deer, is generally thought to be positive. However, measuring host abundance and density directly can be challenging and indirect methods are often used. The observed relationship between the parasite and host may be affected by sampling scale and season, which could lead to different inferences being made. Here, we aimed to test the effect of sampling scale and season on the relationship between density of deer and the density of questing Ixodes ricinus nymphs.

Methods

The density of deer (primarily Dama dama) was estimated using line transect distance sampling of deer dung quantified in different seasons (winter and summer) and measured at three different nested scales (site, transect and observation level). Questing nymph density was measured using blanket drag methods and estimates were calculated at the same scales as deer density estimates. General linear models were used to evaluate the relationship between questing nymphs, deer density and other environmental variables at each sampling scale and each season deer density was measured at.

Results

While a positive relationship between deer density and questing nymph density was detected at the site and transect scale, no relationship was apparent at the observation level. This was likely due to increased variation and reduced precision of deer dung counts at the finest sampling scale. Seasonal changes in deer populations were observed likely reflecting seasonal shifts in habitat usage. The summer estimates of deer density explained questing nymph density whereas winter estimates did not.

Conclusions

Our results show that the scale of sampling can affect the detectability of the positive association between host and vector species. Furthermore, such associations can be obscured if hosts exhibit seasonal changes in habitat use. Thus, both sampling scale and season are important to consider when investigating the relationship between host and vector species.

Competitor densities, habitat, and weather: effects on interspecific interactions between wild deer species

There is a growing interest on the potential interplay between weather, habitat, and interspecific competition on population dynamics of wild herbivores. Favorable environmental conditions may buffer the negative effects of competition; conversely, competition may be expected to be stronger under harsh environmental conditions. We investigated relationships between competitor abundance, weather, and habitat cover on density and local distribution of a medium‐sized herbivore, the roe deer Capreolus capreolus, as well as its spatial overlap with fallow deer Dama dama in a Mediterranean protected area. Over 11 years (2007–2017), roe deer density was not affected by spring–summer rainfall in the previous year and decreased with increasing density of fallow deer in the previous year. Hence, over the considered temporal scale, results supported a major role of competition over weather in influencing population trends of roe deer. At a finer spatial scale, roe deer occupancy was negatively affected by local abundance of fallow deer, especially in “poorer” habitats. We found a slight support for a positive effect of fallow deer density on interspecific spatial overlap. Moreover, fine‐scale spatial overlap between deer species increased with decreasing rainfall in spring–summer. Fallow deer were introduced to our study area in historical times and their role as superior competitors over roe deer has been found also in other study areas. We suggest a potential role of harsh weather conditions during the growing season of vegetation (i.e. scarce rainfall) in triggering the potential for ecological overlap, emphasizing the negative effects of interspecific competition.

The Effect of Protozoa on the Bacterial Composition and Hydrolytic Activity of the Roe Deer Rumen

Simple Summary

Ruminants are herbivorous animals which obtain their energy and nutrients from plant material due to a symbiotic relationship with microorganisms. The main site of this interaction is the rumen, where the intensive digestion processing of plant material takes place. The bacteria, fungi and protozoa create a unique ecosystem—a complex consortium based on mutual interactions. Protozoa are an important component of the microbiome. They have a major impact on the rumen ecosystem as well as on the ruminant’s welfare. Most information on protozoal importance in the digestive processes was obtained from studies on domestic ruminants, with results from studies on wild ruminants being limited. Therefore, the purpose of our study was to compare any effects of the presence of protozoa in the rumen of roe deer (Capreolus capreolus) on the bacterial composition and the digestion rate on the main carbohydrates of their forage. The results obtained from these pilot studies are presented as a short report investigating the relationship between these factors. The analysis of the bacterial composition indicated that the presence of protozoa did not have an effect on bacterial diversity, and furthermore, the protozoa had no effect on the digestion rate of carbohydrates in the rumen.

Abstract

The purpose of this study was to compare the effect of the presence of protozoa in the rumen of wild roe deer (Capreolus capreolus) on the bacteria composition and digestion rate of the main carbohydrates of forage. The research material involved rumen content and rumen fluid, which were collected in the autumn-winter season, from eight adult males of roe deer with an average body mass of 22.6 kg. The microscopic analysis demonstrated that there were only protozoa in 50% of the animals sampled. Qualitative analysis revealed the presence of protozoa belonging to the genus Entodinium. The density of protozoal population varied from 6.5 to 38.7 × 10⁵/mL rumen fluid. The analysis of bacteria composition indicated that protozoa did not have an effect on bacterial diversity. Furthermore, the results of hydrolytic activity revealed that the fastest digestion of carbohydrates was for pectin, while the slowest was inulin. The pH and redox potential in the rumen varied from 5.9 to 6.1 and from −248.1 to −251.1 mV, respectively. In summary, the presence of protozoa in the rumen of wild roe deer does not have an effect on the bacterial population and has no effect on the digestion rate of carbohydrates in the rumen.