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Yue J, Zhang D, Cao M, Li Y, Liang Q, Liu F, Dong Y. Response of microbial community composition and function to land use in mining soils of Xikuang Mountain in Hunan. PLoS One 2024; 19:e0299550. [PMID: 38743658 PMCID: PMC11093284 DOI: 10.1371/journal.pone.0299550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/02/2023] [Accepted: 02/12/2024] [Indexed: 05/16/2024] Open
Abstract
Nine land types in the northern mining area (BKQ) (mining land, smelting land, living area), the old mining area (LKQ) (whole-ore heap, wasteland, grassland), and southern mining area (NKQ) (grassland, shrubs, farmland) of Xikuang Mountain were chosen to explore the composition and functions of soil bacterial communities under different habitats around mining areas. The composition and functions of soil bacterial communities were compared among the sampling sites using 16S rRNA high-throughput sequencing and metagenomic sequencing. α diversity analysis showed the soil bacterial diversity and abundance in the old mining area were significantly higher than those in the northern mining area. β diversity analysis demonstrated that the soil bacterial community composition was highly similar among different vegetation coverages in the southern mining area. Microbial community function analysis showed the annotated KEGG function pathways and eggNOG function composition were consistent between the grassland of the old mining area and the grassland of the southern mining area. This study uncovers the soil bacterial community composition and functions among different habitats in the mining areas of Xikuang Mountain and will underlie soil ecosystem restoration in different habitats under heavy metal pollution around the mining areas there.
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Affiliation(s)
- Jiao Yue
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - Dongpeng Zhang
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - Miaomiao Cao
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - Yukui Li
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - Qianwen Liang
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - Fei Liu
- School of life Sciences, Huaibei Normal University, Huaibei, China
| | - YuQiang Dong
- School of life Sciences, Huaibei Normal University, Huaibei, China
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Farooqi ZUR, Qadir AA, Alserae H, Raza A, Mohy-Ud-Din W. Organic amendment-mediated reclamation and build-up of soil microbial diversity in salt-affected soils: fostering soil biota for shaping rhizosphere to enhance soil health and crop productivity. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:109889-109920. [PMID: 37792186 DOI: 10.1007/s11356-023-30143-1] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/25/2023] [Indexed: 10/05/2023]
Abstract
Soil salinization is a serious environmental problem that affects agricultural productivity and sustainability worldwide. Organic amendments have been considered a practical approach for reclaiming salt-affected soils. In addition to improving soil physical and chemical properties, organic amendments have been found to promote the build-up of new halotolerant bacterial species and microbial diversity, which plays a critical role in maintaining soil health, carbon dynamics, crop productivity, and ecosystem functioning. Many reported studies have indicated the development of soil microbial diversity in organic amendments amended soil. But they have reported only the development of microbial diversity and their identification. This review article provides a comprehensive summary of the current knowledge on the use of different organic amendments for the reclamation of salt-affected soils, focusing on their effects on soil properties, microbial processes and species, development of soil microbial diversity, and microbial processes to tolerate salinity levels and their strategies to cope with it. It also discusses the factors affecting the microbial species developments, adaptation and survival, and carbon dynamics. This review is based on the concept of whether addition of specific organic amendment can promote specific halotolerant microbe species, and if it is, then which amendment is responsible for each microbial species' development and factors responsible for their survival in saline environments.
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Affiliation(s)
- Zia Ur Rahman Farooqi
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, Faisalabad, 38040, Pakistan.
| | - Ayesha Abdul Qadir
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, Faisalabad, 38040, Pakistan
| | - Hussein Alserae
- Department of Soil Sciences and Water Resources, College of Agricultural Engineering Science, Baghdad University, Baghdad, Iraq
| | - Ali Raza
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, Faisalabad, 38040, Pakistan
| | - Waqas Mohy-Ud-Din
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, Faisalabad, 38040, Pakistan
- Department of Soil and Environmental Sciences, Ghazi University, Dera Ghazi Khan, 32200, Pakistan
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Fallah N, Pang Z, Lin Z, Lin W, Mbuya SN, Abubakar AY, Fabrice KMA, Zhang H. Plant growth and stress-regulating metabolite response to biochar utilization boost crop traits and soil health. FRONTIERS IN PLANT SCIENCE 2023; 14:1271490. [PMID: 37900767 PMCID: PMC10600501 DOI: 10.3389/fpls.2023.1271490] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Accepted: 09/19/2023] [Indexed: 10/31/2023]
Abstract
Introduction The utilization of biochar (BC) as a soil amendment in agriculture has gained significant traction among many farmers and researchers, primarily due to its eco-friendly role in boosting crop output. However, the performance of specific metabolites (e.g., zeatin, melatonin, sucrose, and phenyllactic acid) in the various tissues of sugarcane plant (leaf, stem, and root) and rhizosphere soil-deemed plant growth and stress regulators in a long-term BC-amended field remains poorly understood. Additionally, literature on the shift in soil attributes and crop growth triggered by the strong response of these bioactive compounds to longterm BC utilization remains undocumented. Methods Metabolome integrated with highthroughput sequencing analyses were conducted to identify and quantify the performance of plant growth and stress-regulating metabolites in a long-term BC-amended field. Additionally, we investigated how the response of these compounds to BC-treated soil influences crop traits and soil biochemical properties. Results We also identified and quantified the performance of pathogenic bacteria and unraveled the association between these compounds and potential plant growth-promoting bacteria. The BC-supplemented soil significantly boosted the crop traits, including brix, sucrose content, and chlorophyll, as well as soil nutrients, such as soil total nitrogen (TN), ammonium (NH4 +-N), and nitrate (NO3 --N). We also noticed that metabolite-deemed plant growth and stress regulators, including melatonin and phenyllactic acid, were enriched considerably in the stem and root tissues of the BC-amended soil. Zeatin in the leaf, stem, and root tissues exhibited the same trend, followed by sucrose in the leaf tissue of the BC-treated soil, implying that the strong response of these compounds to BC utilization contributed to the promotion of crop traits and soil quality. Pathogenic bacteria belonging to Proteobacteria and Acidobacteria were suppressed under the BC-supplemented soil, especially in the root tissue and rhizosphere soil, whereas plant growth-regulating bacteria, mainly Bradyrhizobium, responded strongly and positively to several metabolites. Discussion Our finding provides valuable information for agronomists, farmers, and environmentalists to make informed decisions about crop production, land use, and soil management practices. Proper soil assessment and understanding of the interaction between the attributes of soil, BC, and metabolites are essential for promoting sustainable agriculture practices and land conservation.
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Affiliation(s)
- Nyumah Fallah
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Ziqin Pang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Zhaoli Lin
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Wenxiong Lin
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Sylvain Ntambo Mbuya
- Département de production végétale, Laboratoire de Recherche en Biofortification, Defense et Valorisation des Cultures (BioDev), Faculté des Sciences Agronomiques, Université de Lubumbashi, Lubumbashi, Democratic Republic of Congo
| | - Ahmad Yusuf Abubakar
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Kabore Manegdebwaoga Arthur Fabrice
- Fujian Provincial Key Laboratory of Agro-ecological Processing and Safety Monitoring, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou, China
- Key Laboratory of Crop Ecology and Molecular Physiology, Fujian Agriculture and Forestry University, Fuzhou, China
| | - Hua Zhang
- Key Laboratory of Sugarcane Biology and Genetic Breeding, Ministry of Agriculture, Fujian Agriculture and Forestry University, Fuzhou, China
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Zhang J, Wang N, Li S, Wang J, Feng Y, Wang E, Li Y, Yang T, Chen W. The Effect of Different Rhizobial Symbionts on the Composition and Diversity of Rhizosphere Microorganisms of Chickpea in Different Soils. PLANTS (BASEL, SWITZERLAND) 2023; 12:3421. [PMID: 37836161 PMCID: PMC10575130 DOI: 10.3390/plants12193421] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Revised: 09/22/2023] [Accepted: 09/22/2023] [Indexed: 10/15/2023]
Abstract
BACKGROUND Chickpea (Cicer arietinum L.) is currently the third most important legume crop in the world. It could form root nodules with its symbiotic rhizobia in soils and perform bio-nitrogen fixation. Mesorhizobium ciceri is a prevalent species in the world, except China, where Mesorhizobium muleiense is the main species associated with chickpea. There were significant differences in the competitive ability between M. ciceri and M. muleiense in sterilized and unsterilized soils collected from Xinjiang, China, where chickpea has been grown long term. In unsterilized soils, M. muleiense was more competitive than M. ciceri, while in sterilized soils, the opposite was the case. In addition, the competitive ability of M. ciceri in soils of new areas of chickpea cultivation was significantly higher than that of M. muleiense. It was speculated that there might be some biological factors in Xinjiang soils of China that could differentially affect the competitive nodulation of these two chickpea rhizobia. To address this question, we compared the composition and diversity of microorganisms in the rhizosphere of chickpea inoculated separately with the above two rhizobial species in soils from old and new chickpea-producing regions. RESULTS Chickpea rhizosphere microbial diversity and composition varied in different areas and were affected significantly due to rhizobial inoculation. In general, eight dominant phyla with 34 dominant genera and 10 dominant phyla with 47 dominant genera were detected in the rhizosphere of chickpea grown in soils of Xinjiang and of the new zones, respectively, with the inoculated rhizobia. Proteobacteria and Actinobacteria were dominant at the phylum level in the rhizosphere of all soils. Pseudomonas appeared significantly enriched after inoculation with M. muleiense in soils from Xinjiang, a phenomenon not found in the new areas of chickpea cultivation, demonstrating that Pseudomonas might be the key biological factor affecting the competitive colonization of M. muleiense and M. ciceri there. CONCLUSIONS Different chickpea rhizobial inoculations of M. muleiense and M. ciceri affected the rhizosphere microbial composition in different sampling soils from different chickpea planting areas. Through high throughput sequencing and statistical analysis, it could be found that Pseudomonas might be the key microorganism influencing the competitive nodulation of different chickpea rhizobia in different soils, as it is the dominant non-rhizobia community in Xinjiang rhizosphere soils, but not in other areas.
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Affiliation(s)
- Junjie Zhang
- College of Food and Bioengineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China
- Collaborative Innovation Center for Food Production and Safety of Henan Province, Zhengzhou 450002, China
| | - Nan Wang
- College of Food and Bioengineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China
| | - Shuo Li
- College of Food and Bioengineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China
| | - Jingqi Wang
- College of Food and Bioengineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China
| | - Yufeng Feng
- College of Food and Bioengineering, Zhengzhou University of Light Industry, Zhengzhou 450002, China
| | - Entao Wang
- Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Ciudad de Mexico C.P. 11340, Mexico
| | - Youguo Li
- State Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan 430070, China
| | - Tao Yang
- Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Wenfeng Chen
- College of Biological Sciences, Rhizobium Research Center, China Agricultural University, Beijing 100193, China
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Liu J, Qiu T, Peñuelas J, Sardans J, Tan W, Wei X, Cui Y, Cui Q, Wu C, Liu L, Zhou B, He H, Fang L. Crop residue return sustains global soil ecological stoichiometry balance. GLOBAL CHANGE BIOLOGY 2023; 29:2203-2226. [PMID: 36607175 DOI: 10.1111/gcb.16584] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 12/25/2022] [Indexed: 05/28/2023]
Abstract
Although soil ecological stoichiometry is constrained in natural ecosystems, its responses to anthropogenic perturbations are largely unknown. Inputs of inorganic fertilizer and crop residue are key cropland anthropogenic managements, with potential to alter their soil ecological stoichiometry. We conducted a global synthesis of 682 data pairs to quantify the responses of soil carbon (C), nitrogen (N), and phosphorus (P) and grain yields to combined inputs of crop residue plus inorganic fertilizer compared with only inorganic fertilizer application. Crop residue inputs enhance soil C (10.5%-12%), N (7.63%-9.2%), and P (2.62%-5.13%) contents, with an increase in C:N (2.51%-3.42%) and C:P (7.27%-8.00%) ratios, and grain yields (6.12%-8.64%), indicating that crop residue alleviated soil C limitation caused by inorganic fertilizer inputs alone and was able to sustain balanced stoichiometry. Moreover, the increase in soil C and C:N(P) ratio reached saturation in ~13-16 years after crop residue return, while grain yield increase trend discontinued. Furthermore, we identified that the increased C, N, and P contents and C:N(P) ratios were regulated by the initial pH and C content, and the increase in grain yield was not only related to soil properties, but also negatively related to the amount of inorganic N fertilizer input to a greater extent. Given that crop residual improvement varies with soil properties and N input levels, we propose a predictive model to preliminary evaluate the potential for crop residual improvement. Particularly, we suggest that part of the global budget should be used to subsidize crop residue input management strategies, achieving to a win-win situation for agricultural production, ecological protection, and climate change mitigation.
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Affiliation(s)
- Ji Liu
- Hubei Province Key Laboratory for Geographical Process Analysis and Simulation, Central China Normal University, Wuhan, China
- Department of Ecohydrology, Leibniz Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany
| | - Tianyi Qiu
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Chinese Academy of Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Josep Peñuelas
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, Bellaterra, Catalonia, Spain
- CREAF, Cerdanyola del Vallès, Catalonia, Spain
| | - Jordi Sardans
- CSIC, Global Ecology Unit CREAF-CSIC-UAB, Bellaterra, Catalonia, Spain
- CREAF, Cerdanyola del Vallès, Catalonia, Spain
| | - Wenfeng Tan
- College of Resources and Environment, Huazhong Agricultural University, Wuhan, China
| | - Xiaomeng Wei
- Key Laboratory of Agro-ecological Processes in Subtropical Region and Changsha Research Station for Agricultural and Environmental Monitoring, Institute of Subtropical Agriculture, Chinese Academy of Sciences, Hunan, China
| | - Yongxing Cui
- College of Urban and Environmental Sciences, Sino-French Institute for Earth System Science, Peking University, Beijing, China
| | - Qingliang Cui
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Chinese Academy of Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Chuanfa Wu
- State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Institute of Plant Virology, Ningbo University, Ningbo, China
| | - Lanfa Liu
- Hubei Province Key Laboratory for Geographical Process Analysis and Simulation, Central China Normal University, Wuhan, China
| | - Baitao Zhou
- Hubei Province Key Laboratory for Geographical Process Analysis and Simulation, Central China Normal University, Wuhan, China
| | - Haoran He
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Chinese Academy of Sciences, Northwest A&F University, Yangling, Shaanxi, China
| | - Linchuan Fang
- Hubei Province Key Laboratory for Geographical Process Analysis and Simulation, Central China Normal University, Wuhan, China
- State Key Laboratory of Soil Erosion and Dryland Farming on the Loess Plateau, Chinese Academy of Sciences, Northwest A&F University, Yangling, Shaanxi, China
- School of Resource and Environmental Engineering, Wuhan University of Technology, Wuhan, China
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Plant Growth Promoting Endophytic Bacteria Bacillus australimaris BLR41 and Enterobacter kobei BLR45 Enhance the Growth of Medicinal Plant Barleria lupulina Lindl. JOURNAL OF PURE AND APPLIED MICROBIOLOGY 2022. [DOI: 10.22207/jpam.16.4.32] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022] Open
Abstract
A total of 50 root colonising bacterial endophytes were identified from a medicinal plant in this investigation (Barleria lupulina), and characterized based on morphologically selected isolates, BLR41 were Gram-negative motile, rod-shaped and BLR45 was Gram-positive, rod-shaped, and light yellow in color. The BLR41 isolate was motile and the BLR45 was positive for indole. The strains BLR41 and BLR45 were positive for citrate, amylase, protease, and lipase. Among all the isolates, BLR41 and BLR45 exhibited higher enzymatic test positive in citrate, amylase lipase, and protease. Furthermore, PGP efficacy as maximum production of zinc in BLR41 isolate and phosphate solubilization in BLR45. Solubilization of the highest zinc (2.80 μg/mL) was obtained by the isolate BLR41, followed by BLR23 and then BLR35. The highest level of phosphate (2.60 μg/mL) was recorded with the BLR45, followed by the BLR07 and BLR18. A consortium of bacterial strains performed better results than individual inoculation. The isolate BLR41 and BLR45 were identified as Bacillus australimaris and Enterobacter kobei following the 16S rRNA sequencing. Among all, seed germination was induced by 93% in consortium BLR41+BLR45, compared to control (T1). An increase in the shoot length by 30% was recorded with the treatment of BLR41+BRL45, BLR41 increase (54%), and BLR45 (35%), respectively. On the other hand, the consortium of mixed cultures, BLR41+BLR45, showed an increased fresh and the weight of dry 65% and 58%. The findings of this study indicate that the consortium of B. australimaris BLR41 and E. kobei BLR45 significantly enhances plant growth in the Pot experiment by zinc and phosphate solubilization properties.
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Wang L, Guan H, Hu J, Feng Y, Li X, Yusef KK, Gao H, Tian D. Aspergillus niger Enhances Organic and Inorganic Phosphorus Release from Wheat Straw by Secretion of Degrading Enzymes and Oxalic Acid. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2022; 70:10738-10746. [PMID: 36027054 DOI: 10.1021/acs.jafc.2c03063] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
To explore the mechanisms of crop straw degradation and phosphorus (P) release by phosphate-solubilizing fungi (PSF), a typical PSF Aspergillus niger (A. niger, ANG) was investigated for the degradation of wheat straw (WST) in this work. The results revealed that A. niger significantly increased wheat straw degradation (30%) compared with no A. niger treatment (7.7%). Meanwhile, more than 92% of total P was released from WST by A. niger, much higher than from WST treatment (69.5%). Although the ratios of inorganic P release between WST and WST + ANG treatments were similar (17.6 vs 19.7%), a significant difference occurred between their release of organic P, i.e., WST (51.9%) vs WST + ANG (72.5%). The high enzyme activity of β-1,4-glucanase and β-glucosidase produced by A. niger contributed to the wheat straw degradation and organic P release compared with no A. niger treatment. Oxalic acid secreted by A. niger dominated the release of inorganic P from WST. Our findings suggested that A. niger is an efficient microbial agent for crop straw degradation and P release, which could be a candidate in the pathway of straw return.
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Affiliation(s)
- Liyan Wang
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Hao Guan
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Jun Hu
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Yi Feng
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Xiang Li
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Kianpoor Kalkhajeh Yusef
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Hongjian Gao
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
| | - Da Tian
- Anhui Province Key Lab of Farmland Ecological Conservation and Pollution Prevention, College of Resources and Environment, Anhui Agricultural University, Hefei 230036, China
- Key Laboratory of JiangHuai Arable Land Resources Protection and Eco-restoration, Ministry of Natural Resources, Ministry of Natural Resources, Hefei 230036, China
- Anhui Engineering and Technology Research Center of Intelligent Manufacture and Efficient Utilization of Green phosphorus Fertilizer, Anhui Agricultural University, Hefei 230036, China
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Li C, Zhang Z, Yang Y, Liao H. Changes in the cervicovaginal microbiota composition of HPV16-infected patients after clinical treatment. Cancer Med 2022; 11:5037-5049. [PMID: 35569127 PMCID: PMC9761074 DOI: 10.1002/cam4.4801] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 04/20/2022] [Accepted: 04/21/2022] [Indexed: 02/03/2023] Open
Abstract
BACKGROUND High-risk human papillomavirus (hrHPV) infection is a key factor that alters cervicovaginal microbiota patterns and causes cervical intraepithelial neoplasias (CINs) or even cervical cancer. Although local excisional treatment can clear hrHPV infection and restore the cervicovaginal microbiota, it is unclear which cervicovaginal microbiota represents recovery. Our objective was to describe the cervicovaginal microbiota before and after treatments and to assess the association between the microbiota and HPV persistence. RESULTS A cohort of 91 participants was classified into four groups (healthy control women and HPV16-infected women with CIN I, CIN II/III, and squamous cell carcinoma [SCC]). Endocervical swabs were collected 3 months prior to treatment and at 3 months post-treatment for bacterial 16S rRNA gene pyrosequencing and for HPV DNA testing. There was an increase in the number of Lactobacillus bacterial species present after the clinical treatments, and the community state type (CST) profiles were shifted from dysbiotic CSTs II and IV to Lactobacillus-dominated CSTs I and III. Specifically, the composition of Geobacter and Prevotella before treatment and Lactobacillus secaliphilus after treatment might have been related to CIN I, the composition of Burkholderia before treatment and Lactobacillus iners after treatment might have been related to CIN II/III, and the composition of Atopobium and Aerococcus before treatment and Bacilli after treatment might have been related to SCC. Further functional predictions revealed that the composition differences were linked to infectious disease- and cancer-related genes. CONCLUSION Our study provides an illustration of the changes in CSTs and the cervicovaginal microbiota before and after HPV16 clearance in each disease state.
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Affiliation(s)
- Chao Li
- Shanghai Key Laboratory of Maternal Fetal Medicine, Shanghai First Maternity and Infant HospitalTongji University School of MedicineShanghaiChina
| | - Zhenbo Zhang
- Reproductive Medicine Center, Department of Obstetrics and Gynecology, Shanghai General HospitalShanghai Jiaotong UniversityShanghaiChina
| | - Yixia Yang
- Reproductive Medicine Center, Department of Obstetrics and Gynecology, Shanghai General HospitalShanghai Jiaotong UniversityShanghaiChina
| | - Hong Liao
- Department of Lab Medicine, Shanghai First Maternity and Infant HospitalTongji University School of MedicineShanghaiChina
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Guo C, Liu X. Effect of soil mulching on agricultural greenhouse gas emissions in China: A meta-analysis. PLoS One 2022; 17:e0262120. [PMID: 35061765 PMCID: PMC8782494 DOI: 10.1371/journal.pone.0262120] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2021] [Accepted: 12/18/2021] [Indexed: 11/18/2022] Open
Abstract
Human demand for food has been increasing as population grows around the world. Meanwhile, global temperature has been rising with the increase of greenhouse gas (GHG) emissions. Although soil mulching (SM) is an effective method to increase crop yield because it could conserve soil moisture and temperature, it is also an important factor affecting GHG productions and emissions. At present, research results in terms of the impact of SM on agricultural GHG emissions are still inconsistent. Therefore, a meta-analysis was used to quantitatively analyze the impact of SM on crop yield and GHG emissions in China. Overall, SM significantly enhanced not only crop yield, but also GHG emissions. Compared with no soil mulching (NSM), SM improved crop yield by 21.84%, while increased global warming potential (GWP) by 11.38%. To minimize the negative impact of SM on GHG, for maize and wheat in arid, semi-arid and semi-humid zones, it is recommended to use flat full mulching with grave or straw plus drip irrigation under neutral or weakly alkaline soil with bulk density <1.3g cm-3. For rice in humid regions, it is advisable to apply SM to minimize GHG emissions by significantly decreasing CH4 emissions.
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Affiliation(s)
- Chan Guo
- College of Economics, Henan University, Kaifeng, China
- * E-mail:
| | - Xufei Liu
- College of Water Resource and Architectural Engineering, Northwest A&F University, Yangling, China
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