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For: Lutter L, Serpell CJ, Tuite MF, Serpell LC, Xue WF. Three-dimensional reconstruction of individual helical nano-filament structures from atomic force microscopy topographs. Biomol Concepts 2020;11:102-115. [PMID: 32374275 DOI: 10.1515/bmc-2020-0009] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Accepted: 03/30/2020] [Indexed: 08/19/2023]  Open
Number Cited by Other Article(s)
1
Chitty C, Kuliga K, Xue WF. Atomic force microscopy 3D structural reconstruction of individual particles in the study of amyloid protein assemblies. Biochem Soc Trans 2024;52:761-771. [PMID: 38600027 DOI: 10.1042/bst20230857] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Revised: 03/11/2024] [Accepted: 04/02/2024] [Indexed: 04/12/2024]
2
Flechsig H, Ando T. Protein dynamics by the combination of high-speed AFM and computational modeling. Curr Opin Struct Biol 2023;80:102591. [PMID: 37075535 DOI: 10.1016/j.sbi.2023.102591] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2022] [Revised: 03/06/2023] [Accepted: 03/08/2023] [Indexed: 04/21/2023]
3
Wilkinson M, Gallardo RU, Martinez RM, Guthertz N, So M, Aubrey LD, Radford SE, Ranson NA. Disease-relevant β2-microglobulin variants share a common amyloid fold. Nat Commun 2023;14:1190. [PMID: 36864041 PMCID: PMC9981686 DOI: 10.1038/s41467-023-36791-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/21/2022] [Accepted: 02/16/2023] [Indexed: 03/04/2023]  Open
4
Konstantoulea K, Guerreiro P, Ramakers M, Louros N, Aubrey LD, Houben B, Michiels E, De Vleeschouwer M, Lampi Y, Ribeiro LF, de Wit J, Xue W, Schymkowitz J, Rousseau F. Heterotypic Amyloid β interactions facilitate amyloid assembly and modify amyloid structure. EMBO J 2022;41:e108591. [PMID: 34842295 PMCID: PMC8762568 DOI: 10.15252/embj.2021108591] [Citation(s) in RCA: 15] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2021] [Revised: 10/26/2021] [Accepted: 10/29/2021] [Indexed: 01/19/2023]  Open
5
Wang F, Gnewou O, Solemanifar A, Conticello VP, Egelman EH. Cryo-EM of Helical Polymers. Chem Rev 2022;122:14055-14065. [PMID: 35133794 PMCID: PMC9357864 DOI: 10.1021/acs.chemrev.1c00753] [Citation(s) in RCA: 22] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
6
Taylor AIP, Staniforth RA. General Principles Underpinning Amyloid Structure. Front Neurosci 2022;16:878869. [PMID: 35720732 PMCID: PMC9201691 DOI: 10.3389/fnins.2022.878869] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2022] [Accepted: 05/11/2022] [Indexed: 12/14/2022]  Open
7
Sanami S, Purton TJ, Smith DP, Tuite MF, Xue WF. Comparative Analysis of the Relative Fragmentation Stabilities of Polymorphic Alpha-Synuclein Amyloid Fibrils. Biomolecules 2022;12:630. [PMID: 35625557 PMCID: PMC9138312 DOI: 10.3390/biom12050630] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 04/10/2022] [Accepted: 04/14/2022] [Indexed: 02/04/2023]  Open
8
Lutter L, Al-Hilaly YK, Serpell CJ, Tuite MF, Wischik CM, Serpell LC, Xue WF. Structural Identification of Individual Helical Amyloid Filaments by Integration of Cryo-Electron Microscopy-Derived Maps in Comparative Morphometric Atomic Force Microscopy Image Analysis. J Mol Biol 2022;434:167466. [PMID: 35077765 PMCID: PMC9005780 DOI: 10.1016/j.jmb.2022.167466] [Citation(s) in RCA: 11] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/21/2021] [Accepted: 01/18/2022] [Indexed: 11/27/2022]
9
Luo X, Zhang J, Cai G, Wu Y, Ma K. Finite Element Analysis of Femoral-Acetabular Impingement (FAI) Based on Three-Dimensional Reconstruction. JOURNAL OF HEALTHCARE ENGINEERING 2022;2022:2937056. [PMID: 35265295 PMCID: PMC8898867 DOI: 10.1155/2022/2937056] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/26/2021] [Revised: 01/26/2022] [Accepted: 01/27/2022] [Indexed: 11/17/2022]
10
Tang X, Fan G, Zhang H, Dai X, Hu Y, Zhang Z, Li Y. An integrated optical waveguide micro-cantilever system for chip-based AFM. J Microsc 2021;285:112-116. [PMID: 34866187 DOI: 10.1111/jmi.13080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2021] [Revised: 11/19/2021] [Accepted: 12/02/2021] [Indexed: 11/25/2022]
11
Niina T, Matsunaga Y, Takada S. Rigid-body fitting to atomic force microscopy images for inferring probe shape and biomolecular structure. PLoS Comput Biol 2021;17:e1009215. [PMID: 34283829 PMCID: PMC8323932 DOI: 10.1371/journal.pcbi.1009215] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2021] [Revised: 07/30/2021] [Accepted: 06/26/2021] [Indexed: 12/01/2022]  Open
12
Lutter L, Aubrey LD, Xue WF. On the Structural Diversity and Individuality of Polymorphic Amyloid Protein Assemblies. J Mol Biol 2021;433:167124. [PMID: 34224749 DOI: 10.1016/j.jmb.2021.167124] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 06/20/2021] [Accepted: 06/26/2021] [Indexed: 12/24/2022]
13
Marques-Moros F, Forment-Aliaga A, Pinilla-Cienfuegos E, Canet-Ferrer J. Mirror effect in atomic force microscopy profiles enables tip reconstruction. Sci Rep 2020;10:18911. [PMID: 33144609 PMCID: PMC7641199 DOI: 10.1038/s41598-020-75785-0] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2020] [Accepted: 10/09/2020] [Indexed: 11/29/2022]  Open
14
Aubrey LD, Blakeman BJF, Lutter L, Serpell CJ, Tuite MF, Serpell LC, Xue WF. Quantification of amyloid fibril polymorphism by nano-morphometry reveals the individuality of filament assembly. Commun Chem 2020;3:125. [PMID: 36703355 PMCID: PMC9814634 DOI: 10.1038/s42004-020-00372-3] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2020] [Accepted: 08/12/2020] [Indexed: 01/29/2023]  Open
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