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Ohnishi K, Sokabe T, Miura T, Tominaga M, Ohta A, Kuhara A. G protein-coupled receptor-based thermosensation determines temperature acclimatization of Caenorhabditis elegans. Nat Commun 2024; 15:1660. [PMID: 38396085 PMCID: PMC10891075 DOI: 10.1038/s41467-024-46042-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Accepted: 02/12/2024] [Indexed: 02/25/2024] Open
Abstract
Animals must sense and acclimatize to environmental temperatures for survival, yet their thermosensing mechanisms other than transient receptor potential (TRP) channels remain poorly understood. We identify a trimeric G protein-coupled receptor (GPCR), SRH-40, which confers thermosensitivity in sensory neurons regulating temperature acclimatization in Caenorhabditis elegans. Systematic knockdown of 1000 GPCRs by RNAi reveals GPCRs involved in temperature acclimatization, among which srh-40 is highly expressed in the ADL sensory neuron, a temperature-responsive chemosensory neuron, where TRP channels act as accessorial thermoreceptors. In vivo Ca2+ imaging demonstrates that an srh-40 mutation reduced the temperature sensitivity of ADL, resulting in supranormal temperature acclimatization. Ectopically expressing SRH-40 in a non-warmth-sensing gustatory neuron confers temperature responses. Moreover, temperature-dependent SRH-40 activation is reconstituted in Drosophila S2R+ cells. Overall, SRH-40 may be involved in thermosensory signaling underlying temperature acclimatization. We propose a dual thermosensing machinery through a GPCR and TRP channels in a single sensory neuron.
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Affiliation(s)
- Kohei Ohnishi
- Graduate school of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan
- Faculty of Science and Engineering, Konan University, Kobe, Hyogo, 658-8501, Japan
- Institute for Integrative Neurobiology, Konan University, Kobe, Hyogo, 658-8501, Japan
- Physiology and Biophysics, Graduate School of Biomedical and Health Sciences (Medical), Hiroshima University, Hiroshima, 734-8553, Japan
| | - Takaaki Sokabe
- Division of Cell Signaling, National Institute for Physiological Sciences, Okazaki, Aichi, 444-8787, Japan.
- Thermal Biology Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki, Aichi, 444-8787, Japan.
- Department of Physiological Sciences, SOKENDAI, Okazaki, Aichi, 444-8787, Japan.
- AMED-PRIME, Japan Agency for Medical Research and Development, Tokyo, 100-0004, Japan.
| | - Toru Miura
- Faculty of Science and Engineering, Konan University, Kobe, Hyogo, 658-8501, Japan
- Institute for Integrative Neurobiology, Konan University, Kobe, Hyogo, 658-8501, Japan
| | - Makoto Tominaga
- Division of Cell Signaling, National Institute for Physiological Sciences, Okazaki, Aichi, 444-8787, Japan
- Thermal Biology Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Okazaki, Aichi, 444-8787, Japan
- Department of Physiological Sciences, SOKENDAI, Okazaki, Aichi, 444-8787, Japan
| | - Akane Ohta
- Graduate school of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan.
- Faculty of Science and Engineering, Konan University, Kobe, Hyogo, 658-8501, Japan.
- Institute for Integrative Neurobiology, Konan University, Kobe, Hyogo, 658-8501, Japan.
| | - Atsushi Kuhara
- Graduate school of Natural Science, Konan University, Kobe, Hyogo, 658-8501, Japan.
- Faculty of Science and Engineering, Konan University, Kobe, Hyogo, 658-8501, Japan.
- Institute for Integrative Neurobiology, Konan University, Kobe, Hyogo, 658-8501, Japan.
- AMED-PRIME, Japan Agency for Medical Research and Development, Tokyo, 100-0004, Japan.
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McMillen A, Chew Y. Neural mechanisms of dopamine function in learning and memory in Caenorhabditis elegans. Neuronal Signal 2024; 8:NS20230057. [PMID: 38572143 PMCID: PMC10987485 DOI: 10.1042/ns20230057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2023] [Revised: 12/03/2023] [Accepted: 12/11/2023] [Indexed: 04/05/2024] Open
Abstract
Research into learning and memory over the past decades has revealed key neurotransmitters that regulate these processes, many of which are evolutionarily conserved across diverse species. The monoamine neurotransmitter dopamine is one example of this, with countless studies demonstrating its importance in regulating behavioural plasticity. However, dopaminergic neural networks in the mammalian brain consist of hundreds or thousands of neurons, and thus cannot be studied at the level of single neurons acting within defined neural circuits. The nematode Caenorhabditis elegans (C. elegans) has an experimentally tractable nervous system with a completely characterized synaptic connectome. This makes it an advantageous system to undertake mechanistic studies into how dopamine encodes lasting yet flexible behavioural plasticity in the nervous system. In this review, we synthesize the research to date exploring the importance of dopaminergic signalling in learning, memory formation, and forgetting, focusing on research in C. elegans. We also explore the potential for dopamine-specific fluorescent biosensors in C. elegans to visualize dopaminergic neural circuits during learning and memory formation in real-time. We propose that the use of these sensors in C. elegans, in combination with optogenetic and other light-based approaches, will further illuminate the detailed spatiotemporal requirements for encoding behavioural plasticity in an accessible experimental system. Understanding the key molecules and circuit mechanisms that regulate learning and forgetting in more compact invertebrate nervous systems may reveal new druggable targets for enhancing memory storage and delaying memory loss in bigger brains.
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Affiliation(s)
- Anna McMillen
- College of Medicine and Public Health and Flinders Health and Medical Research Institute, Flinders University, Bedford Park, 5042, South Australia, Australia
| | - Yee Lian Chew
- College of Medicine and Public Health and Flinders Health and Medical Research Institute, Flinders University, Bedford Park, 5042, South Australia, Australia
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Lee I, Knickerbocker AC, Depew CR, Martin E, Dicent J, Miller GW, Bucher ML. Effect of altered production and storage of dopamine on development and behavior in C. elegans. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2023:2023.10.07.561350. [PMID: 37873331 PMCID: PMC10592695 DOI: 10.1101/2023.10.07.561350] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/25/2023]
Abstract
The nematode, Caenorhabditis elegans, is an advantageous model for studying developmental toxicology due to its homology to humans and well-defined developmental stages. Similarly to humans, C. elegans utilize dopamine as a neurotransmitter to regulate motor behavior. We have previously reported behavioral deficits in a genetic model of C. elegans (OK411) that lack the neurotransmitter transporter necessary for packaging dopamine into synaptic vesicles. Anecdotally, we observed these C. elegans appeared to have a smaller body size, which is supported by prior studies that observed a larger body size in C. elegans that lack the enzyme that catalyzes dopamine synthesis, suggesting a complex regulatory system in which dopamine mediates body size in C. elegans. However, the question of whether body size abnormalities apparent in C. elegans with disruptions to their dopamine system are developmental or purely based on body size remains unanswered. Here, we present data characterizing the effect of gene mutations in dopamine-related proteins on body size, development, and behavior. We analyzed C. elegans that lack the ability to sequester dopamine (OK411), that overproduce dopamine (UA57), and a novel strain (MBIA) generated through crossing OK411 and UA57, which lacks the ability to sequester dopamine into vesicles and additionally endogenously overproduces dopamine. This novel strain was generated to address the hypothesis that an endogenous increase in production of dopamine can rescue deficits caused by a lack of vesicular dopamine sequestration. Compared to wild type, OK411 have shorter body lengths and behavioral deficits in early life stages. In contrast, the MBIA strain have similar body lengths to wild-type by early adulthood and display similar behavior to wild-type by early adulthood. Our data suggests that endogenously increasing the production of dopamine is able to mitigate deficits in C. elegans lacking the ability to package dopamine into synaptic vesicles. These results provide evidence that the dopamine system impacts development, growth, and reproduction in C. elegans.
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Affiliation(s)
- Irene Lee
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Ava C Knickerbocker
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Charlotte Rose Depew
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Elizabeth Martin
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Jocelyn Dicent
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Gary W Miller
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
| | - Meghan L Bucher
- Department of Environmental Health Sciences, Mailman School of Public Health at Columbia University, New York, NY 10032, USA
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Tee LF, Young JJ, Maruyama K, Kimura S, Suzuki R, Endo Y, Kimura KD. Electric shock causes a fleeing-like persistent behavioral response in the nematode Caenorhabditis elegans. Genetics 2023; 225:iyad148. [PMID: 37595066 PMCID: PMC10550322 DOI: 10.1093/genetics/iyad148] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/11/2023] [Accepted: 07/27/2023] [Indexed: 08/20/2023] Open
Abstract
Behavioral persistency reflects internal brain states, which are the foundations of multiple brain functions. However, experimental paradigms enabling genetic analyses of behavioral persistency and its associated brain functions have been limited. Here, we report novel persistent behavioral responses caused by electric stimuli in the nematode Caenorhabditis elegans. When the animals on bacterial food are stimulated by alternating current, their movement speed suddenly increases 2- to 3-fold, persisting for more than 1 minute even after a 5-second stimulation. Genetic analyses reveal that voltage-gated channels in the neurons are required for the response, possibly as the sensors, and neuropeptide signaling regulates the duration of the persistent response. Additional behavioral analyses implicate that the animal's response to electric shock is scalable and has a negative valence. These properties, along with persistence, have been recently regarded as essential features of emotion, suggesting that C. elegans response to electric shock may reflect a form of emotion, akin to fear.
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Affiliation(s)
- Ling Fei Tee
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
| | - Jared J Young
- Mills College at Northeastern University, Oakland, CA 94613, USA
| | - Keisuke Maruyama
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
| | - Sota Kimura
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
| | - Ryoga Suzuki
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
| | - Yuto Endo
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Koutarou D Kimura
- Graduate School of Science, Nagoya City University, Nagoya 467-8501, Japan
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
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De-Souza EA, Thompson MA, Taylor RC. Olfactory chemosensation extends lifespan through TGF-β signaling and UPR activation. NATURE AGING 2023; 3:938-947. [PMID: 37500972 PMCID: PMC10432268 DOI: 10.1038/s43587-023-00467-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2022] [Accepted: 07/04/2023] [Indexed: 07/29/2023]
Abstract
Animals rely on chemosensory cues to survive in pathogen-rich environments. In Caenorhabditis elegans, pathogenic bacteria trigger aversive behaviors through neuronal perception and activate molecular defenses throughout the animal. This suggests that neurons can coordinate the activation of organism-wide defensive responses upon pathogen perception. In this study, we found that exposure to volatile pathogen-associated compounds induces activation of the endoplasmic reticulum unfolded protein response (UPRER) in peripheral tissues after xbp-1 splicing in neurons. This odorant-induced UPRER activation is dependent upon DAF-7/transforming growth factor beta (TGF-β) signaling and leads to extended lifespan and enhanced clearance of toxic proteins. Notably, rescue of the DAF-1 TGF-β receptor in RIM/RIC interneurons is sufficient to significantly recover UPRER activation upon 1-undecene exposure. Our data suggest that the cell non-autonomous UPRER rewires organismal proteostasis in response to pathogen detection, pre-empting proteotoxic stress. Thus, chemosensation of particular odors may be a route to manipulation of stress responses and longevity.
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Affiliation(s)
- Evandro A De-Souza
- Neurobiology Division, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.
| | - Maximillian A Thompson
- Neurobiology Division, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.
| | - Rebecca C Taylor
- Neurobiology Division, Medical Research Council Laboratory of Molecular Biology, Cambridge, UK.
- School of Biological Sciences, University of East Anglia, Norwich, UK.
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Liu H, Wu JJ, Li R, Wang PZ, Huang JH, Xu Y, Zhao JL, Wu PP, Li SJ, Wu ZX. Disexcitation in the ASH/RIM/ADL negative feedback circuit fine-tunes hyperosmotic sensation and avoidance in Caenorhabditis elegans. Front Mol Neurosci 2023; 16:1101628. [PMID: 37008778 PMCID: PMC10050701 DOI: 10.3389/fnmol.2023.1101628] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Accepted: 02/21/2023] [Indexed: 03/17/2023] Open
Abstract
Sensations, especially nociception, are tightly controlled and regulated by the central and peripheral nervous systems. Osmotic sensation and related physiological and behavioral reactions are essential for animal well-being and survival. In this study, we find that interaction between secondary nociceptive ADL and primary nociceptive ASH neurons upregulates Caenorhabditis elegans avoidance of the mild and medium hyperosmolality of 0.41 and 0.88 Osm but does not affect avoidance of high osmolality of 1.37 and 2.29 Osm. The interaction between ASH and ADL is actualized through a negative feedback circuit consisting of ASH, ADL, and RIM interneurons. In this circuit, hyperosmolality-sensitive ADL augments the ASH hyperosmotic response and animal hyperosmotic avoidance; RIM inhibits ADL and is excited by ASH; thus, ASH exciting RIM reduces ADL augmenting ASH. The neuronal signal integration modality in the circuit is disexcitation. In addition, ASH promotes hyperosmotic avoidance through ASH/RIC/AIY feedforward circuit. Finally, we find that in addition to ASH and ADL, multiple sensory neurons are involved in hyperosmotic sensation and avoidance behavior.
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Sammi SR, Syeda T, Conrow KD, Leung MCK, Cannon JR. Complementary biological and computational approaches identify distinct mechanisms of chlorpyrifos versus chlorpyrifos-oxon-induced dopaminergic neurotoxicity. Toxicol Sci 2023; 191:163-178. [PMID: 36269219 PMCID: PMC9887671 DOI: 10.1093/toxsci/kfac114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2023] Open
Abstract
Organophosphate (OP) pesticides are widely used in agriculture. While acute cholinergic toxicity has been extensively studied, chronic effects on other neurons are less understood. Here, we demonstrated that the OP pesticide chlorpyrifos (CPF) and its oxon metabolite are dopaminergic neurotoxicants in Caenorhabditis elegans. CPF treatment led to inhibition of mitochondrial complex II, II + III, and V in rat liver mitochondria, while CPF-oxon did not (complex II + III and IV inhibition observed only at high doses). While the effect on C. elegans cholinergic behavior was mostly reversible with toxicant washout, dopamine-associated deficits persisted, suggesting dopaminergic neurotoxicity was irreversible. CPF reduced the mitochondrial content in a dose-dependent manner and the fat modulatory genes cyp-35A2 and cyp-35A3 were found to have a key role in CPF neurotoxicity. These findings were consistent with in vitro effects of CPF and CPF-oxon on nuclear receptor signaling and fatty acid/steroid metabolism observed in ToxCast assays. Two-way hierarchical analysis revealed in vitro effects on estrogen receptor, pregnane X receptor, and peroxisome proliferator-activated receptor gamma pathways as well as neurotoxicity of CPF, malathion, and diazinon, whereas these effects were not detected in malaoxon and diazoxon. Taken together, our study suggests that mitochondrial toxicity and metabolic effects of CPF, but not CPF-oxon, have a key role of CPF neurotoxicity in the low-dose, chronic exposure. Further mechanistic studies are needed to examine mitochondria as a common target for all OP pesticide parent compounds, because this has important implications on cumulative pesticide risk assessment.
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Affiliation(s)
- Shreesh Raj Sammi
- School of Health Sciences, Purdue University, West Lafayette, Indiana 47907, USA
- Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana, USA
| | - Tauqeerunnisa Syeda
- School of Health Sciences, Purdue University, West Lafayette, Indiana 47907, USA
- Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana, USA
| | - Kendra D Conrow
- School of Mathematical and Natural Sciences, Arizona State University, Glendale, Arizona, USA
| | - Maxwell C K Leung
- School of Mathematical and Natural Sciences, Arizona State University, Glendale, Arizona, USA
| | - Jason R Cannon
- School of Health Sciences, Purdue University, West Lafayette, Indiana 47907, USA
- Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, Indiana, USA
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Ikejiri Y, Tanimoto Y, Fujita K, Hiramatsu F, Yamazaki SJ, Endo Y, Iwatani Y, Fujimoto K, Kimura KD. Neural mechanism of experience-dependent sensory gain control in C. elegans. Neurosci Res 2023; 191:77-90. [PMID: 36681153 DOI: 10.1016/j.neures.2023.01.006] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/03/2022] [Revised: 01/15/2023] [Accepted: 01/16/2023] [Indexed: 01/20/2023]
Abstract
Animals' sensory systems adjust their responsiveness to environmental stimuli that vary greatly in their intensity. Here we report the neural mechanism of experience-dependent sensory adjustment, especially gain control, in the ASH nociceptive neurons in Caenorhabditis elegans. Using calcium imaging under gradual changes in stimulus intensity, we find that the ASH neurons of naive animals respond to concentration increases in a repulsive odor 2-nonanone regardless of the magnitude of the concentration increase. However, after preexposure to the odor, the ASH neurons exhibit significantly weak responses to a small gradual increase in odor concentration while their responses to a large gradual increase remain strong. Thus, preexposure changes the slope of stimulus-response relationships (i.e., gain control). Behavioral analysis suggests that this gain control contributes to the preexposure-dependent enhancement of odor avoidance behavior. Mathematical analysis reveals that the ASH response consists of fast and slow components, and that the fast component is specifically suppressed by preexposure for the gain control. In addition, genetic analysis suggests that G protein signaling may be required for the regulation of fast component. We propose how prior experience dynamically and specifically modulates stimulus-response relationships in sensory neurons, eventually leading to adaptive modulation of behavior.
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Affiliation(s)
- Yosuke Ikejiri
- Department of Information and Basic Science, Graduate School of Science, Nagoya City University, Nagoya, Aichi 467-8501, Japan; Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuki Tanimoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Kosuke Fujita
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Fumie Hiramatsu
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Shuhei J Yamazaki
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuto Endo
- Department of Information and Basic Science, Graduate School of Science, Nagoya City University, Nagoya, Aichi 467-8501, Japan; Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yasushi Iwatani
- Department of Science and Technology, Graduate School of Science and Technology, Hirosaki University, Hirosaki, Aomori 036-8561, Japan
| | - Koichi Fujimoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Koutarou D Kimura
- Department of Information and Basic Science, Graduate School of Science, Nagoya City University, Nagoya, Aichi 467-8501, Japan; Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
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Rosikon KD, Bone MC, Lawal HO. Regulation and modulation of biogenic amine neurotransmission in Drosophila and Caenorhabditis elegans. Front Physiol 2023; 14:970405. [PMID: 36875033 PMCID: PMC9978017 DOI: 10.3389/fphys.2023.970405] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2022] [Accepted: 01/23/2023] [Indexed: 02/18/2023] Open
Abstract
Neurotransmitters are crucial for the relay of signals between neurons and their target. Monoamine neurotransmitters dopamine (DA), serotonin (5-HT), and histamine are found in both invertebrates and mammals and are known to control key physiological aspects in health and disease. Others, such as octopamine (OA) and tyramine (TA), are abundant in invertebrates. TA is expressed in both Caenorhabditis elegans and Drosophila melanogaster and plays important roles in the regulation of essential life functions in each organism. OA and TA are thought to act as the mammalian homologs of epinephrine and norepinephrine respectively, and when triggered, they act in response to the various stressors in the fight-or-flight response. 5-HT regulates a wide range of behaviors in C. elegans including egg-laying, male mating, locomotion, and pharyngeal pumping. 5-HT acts predominantly through its receptors, of which various classes have been described in both flies and worms. The adult brain of Drosophila is composed of approximately 80 serotonergic neurons, which are involved in modulation of circadian rhythm, feeding, aggression, and long-term memory formation. DA is a major monoamine neurotransmitter that mediates a variety of critical organismal functions and is essential for synaptic transmission in invertebrates as it is in mammals, in which it is also a precursor for the synthesis of adrenaline and noradrenaline. In C. elegans and Drosophila as in mammals, DA receptors play critical roles and are generally grouped into two classes, D1-like and D2-like based on their predicted coupling to downstream G proteins. Drosophila uses histamine as a neurotransmitter in photoreceptors as well as a small number of neurons in the CNS. C. elegans does not use histamine as a neurotransmitter. Here, we review the comprehensive set of known amine neurotransmitters found in invertebrates, and discuss their biological and modulatory functions using the vast literature on both Drosophila and C. elegans. We also suggest the potential interactions between aminergic neurotransmitters systems in the modulation of neurophysiological activity and behavior.
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Affiliation(s)
- Katarzyna D Rosikon
- Neuroscience Program, Department of Biological Sciences, Delaware State University, Dover, DE, United States
| | - Megan C Bone
- Neuroscience Program, Department of Biological Sciences, Delaware State University, Dover, DE, United States
| | - Hakeem O Lawal
- Neuroscience Program, Department of Biological Sciences, Delaware State University, Dover, DE, United States
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The Human LRRK2 Modulates the Age-Dependent Effects of Developmental Methylmercury Exposure in Caenorhabditis elegans. Neurotox Res 2022; 40:1235-1247. [PMID: 35838907 DOI: 10.1007/s12640-022-00547-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2022] [Revised: 06/30/2022] [Accepted: 07/06/2022] [Indexed: 10/17/2022]
Abstract
Methylmercury (MeHg) neurotoxicity exhibits age-dependent effects with a latent and/or persistent neurotoxic effect on aged animals. Individual susceptibility to MeHg neurotoxicity is governed by both exposure duration and genetic factors that can magnify or mitigate the pathologic processes associated with this exposure. We previously showed the G2019S mutation of leucine-rich repeat kinase 2 (LRRK2) modulates the response of worms to high levels of MeHg, mitigating its effect on neuronal morphology in pre-vesicles in cephalic (CEP) dopaminergic neurons. Here we sought to better understand the long-term effects of MeHg exposure at low levels (100-fold lower than that in our previous report) and the modulatory role of the LRRK2 mutation. Worms exposed to MeHg (10 or 50 nM) at the larval stage (L1 stage) were compared at adult stages (young age: day 1 adult; middle age: day 5 adult; old age: day 10 adult) for the swimming speeds in M9 buffer, moving speeds during locomotion on an OP50-seeded plate, and the numbers of CEP dopaminergic pre-vesicles, vesicular structures originating from the dendrites of CEP for exportation of cellular content. In addition, the expression levels of Caenorhabditis elegans homologs of dopamine transporter (dat-1) and tyrosine hydroxylase (cat-2) were also analyzed at these adult stages. Our data showed that swimming speeds were reduced in wild-type worms at the day 10 adult stage at 50 nM MeHg level; yet, reduced swimming speeds were noted in the G2019S LRRK2 transgenic line upon MeHg exposures as low as 10 nM. Compared to locomotor speeds, swimming speeds appear to be more sensitive to the behavioral effects of developmental MeHg exposures, as the locomotor speeds were largely intact and indistinguishable from controls following MeHg exposures. Furthermore, we showed an age-dependent modulation of dat-1 and cat-2 expressions, which could also be modified by the LRRK2 mutation. Although MeHg exposures did not change the number of pre-vesicles, the LRRK2 mutation was associated with increased numbers of pre-vesicles in aged worms. Our data suggest that the latent behavioral effects of MeHg are sensitized by the G2019S LRRK2 mutation, and the underlying mechanism likely involves age-dependent changes in dopaminergic signaling.
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Sammi SR, Jameson LE, Conrow KD, Leung MCK, Cannon JR. Caenorhabditis elegans Neurotoxicity Testing: Novel Applications in the Adverse Outcome Pathway Framework. FRONTIERS IN TOXICOLOGY 2022; 4:826488. [PMID: 35373186 PMCID: PMC8966687 DOI: 10.3389/ftox.2022.826488] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2021] [Accepted: 02/07/2022] [Indexed: 12/05/2022] Open
Abstract
Neurological hazard assessment of industrial and pesticidal chemicals demands a substantial amount of time and resources. Caenorhabditis elegans is an established model organism in developmental biology and neuroscience. It presents an ideal test system with relatively fewer neurons (302 in hermaphrodites) versus higher-order species, a transparent body, short lifespan, making it easier to perform neurotoxic assessment in a time and cost-effective manner. Yet, no regulatory testing guidelines have been developed for C. elegans in the field of developmental and adult neurotoxicity. Here, we describe a set of morphological and behavioral assessment protocols to examine neurotoxicity in C. elegans with relevance to cholinergic and dopaminergic systems. We discuss the homology of human genes and associated proteins in these two signaling pathways and evaluate the morphological and behavioral endpoints of C. elegans in the context of published adverse outcome pathways of neurodegenerative diseases. We conclude that C. elegans neurotoxicity testing will not only be instrumental to eliminating mammalian testing in neurological hazard assessment but also lead to new knowledge and mechanistic validation in the adverse outcome pathway framework.
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Affiliation(s)
- Shreesh Raj Sammi
- School of Health Sciences, Purdue University, West Lafayette, IN, United States
- Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, IN, United States
| | - Laura E. Jameson
- School of Mathematical and Natural Sciences, Arizona State University, Glendale, AZ, United States
| | - Kendra D. Conrow
- School of Mathematical and Natural Sciences, Arizona State University, Glendale, AZ, United States
| | - Maxwell C. K. Leung
- School of Mathematical and Natural Sciences, Arizona State University, Glendale, AZ, United States
- *Correspondence: Maxwell C. K. Leung, ; Jason R. Cannon,
| | - Jason R. Cannon
- School of Health Sciences, Purdue University, West Lafayette, IN, United States
- Purdue Institute for Integrative Neuroscience, Purdue University, West Lafayette, IN, United States
- *Correspondence: Maxwell C. K. Leung, ; Jason R. Cannon,
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12
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Sudevan S, Muto K, Higashitani N, Hashizume T, Higashibata A, Ellwood RA, Deane CS, Rahman M, Vanapalli SA, Etheridge T, Szewczyk NJ, Higashitani A. Loss of physical contact in space alters the dopamine system in C. elegans. iScience 2022; 25:103762. [PMID: 35141505 PMCID: PMC8810405 DOI: 10.1016/j.isci.2022.103762] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 01/05/2022] [Accepted: 01/10/2022] [Indexed: 12/11/2022] Open
Affiliation(s)
- Surabhi Sudevan
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
- Medical Research Council (MRC) Versus Arthritis Centre for Musculoskeletal Ageing Research, Royal Derby Hospital, University of Nottingham, Derby, UK
- Musculoskeletal Conditions, National Institute for Health Research Nottingham Biomedical Research Centre, Derby, UK
| | - Kasumi Muto
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
| | - Nahoko Higashitani
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
| | - Toko Hashizume
- Advanced Engineering Services Co. Ltd, Tsukuba Mitsui Building7F,1-6-1 Takezono, Tsukuba, Ibaraki 305-0032, Japan
| | - Akira Higashibata
- Human Spaceflight Technology Directorate, Japan Aerospace Exploration Agency, 2-1-1 Sengen, Tsukuba, Ibaraki 305-8505, Japan
| | - Rebecca A. Ellwood
- Medical Research Council (MRC) Versus Arthritis Centre for Musculoskeletal Ageing Research, Royal Derby Hospital, University of Nottingham, Derby, UK
- Musculoskeletal Conditions, National Institute for Health Research Nottingham Biomedical Research Centre, Derby, UK
| | - Colleen S. Deane
- Department of Sport and Health Sciences, College of Life and Environmental Sciences, University of Exeter, St. Luke's Campus, Exeter, UK
- Living Systems Institute, University of Exeter, StockerRoad, Exeter, UK
| | - Mizanur Rahman
- Department of Chemical Engineering, Texas Tech University, Lubbock, TX, USA
| | - Siva A. Vanapalli
- Department of Chemical Engineering, Texas Tech University, Lubbock, TX, USA
| | - Timothy Etheridge
- Department of Sport and Health Sciences, College of Life and Environmental Sciences, University of Exeter, St. Luke's Campus, Exeter, UK
- Corresponding author
| | - Nathaniel J. Szewczyk
- Medical Research Council (MRC) Versus Arthritis Centre for Musculoskeletal Ageing Research, Royal Derby Hospital, University of Nottingham, Derby, UK
- Musculoskeletal Conditions, National Institute for Health Research Nottingham Biomedical Research Centre, Derby, UK
- Ohio Musculoskeletal and Neurologic Institute, Ohio University, Athens, OH, USA
- Department of Biomedical Sciences, Heritage College of Osteopathic Medicine, Ohio University, Athens, OH, USA
- Corresponding author
| | - Atsushi Higashitani
- Graduate School of Life Sciences, Tohoku University, 2-1-1 Katahira, Aoba-ku, Sendai, Miyagi 980-8577, Japan
- Corresponding author
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13
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Yang W, Wu T, Tu S, Qin Y, Shen C, Li J, Choi MK, Duan F, Zhang Y. Redundant neural circuits regulate olfactory integration. PLoS Genet 2022; 18:e1010029. [PMID: 35100258 PMCID: PMC8830790 DOI: 10.1371/journal.pgen.1010029] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2021] [Revised: 02/10/2022] [Accepted: 01/11/2022] [Indexed: 11/18/2022] Open
Abstract
Olfactory integration is important for survival in a natural habitat. However, how the nervous system processes signals of two odorants present simultaneously to generate a coherent behavioral response is poorly understood. Here, we characterize circuit basis for a form of olfactory integration in Caenorhabditis elegans. We find that the presence of a repulsive odorant, 2-nonanone, that signals threat strongly blocks the attraction of other odorants, such as isoamyl alcohol (IAA) or benzaldehyde, that signal food. Using a forward genetic screen, we found that genes known to regulate the structure and function of sensory neurons, osm-5 and osm-1, played a critical role in the integration process. Loss of these genes mildly reduces the response to the repellent 2-nonanone and disrupts the integration effect. Restoring the function of OSM-5 in either AWB or ASH, two sensory neurons known to mediate 2-nonanone-evoked avoidance, is sufficient to rescue. Sensory neurons AWB and downstream interneurons AVA, AIB, RIM that play critical roles in olfactory sensorimotor response are able to process signals generated by 2-nonanone or IAA or the mixture of the two odorants and contribute to the integration. Thus, our results identify redundant neural circuits that regulate the robust effect of a repulsive odorant to block responses to attractive odorants and uncover the neuronal and cellular basis for this complex olfactory task. In their natural environment, animals, including humans, encounter complex olfactory stimuli. Thus, how the brain processes multiple sensory cues to generate a coherent behavioral output is critical for the survival of the animal. In the present study, we combined molecular cellular genetics, optical physiology and behavioral analysis to study a common olfactory phenomenon in which the presence of one odorant blocks the response to another. Our results show that the integrated response is regulated by redundant neuronal circuits that engage several interneurons essential for olfactory sensorimotor responses, a mechanism that likely ensures a robust behavioral response to sensory cues representing information critical for survival.
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Affiliation(s)
- Wenxing Yang
- Department of Organismic and Evolutionary Biology, Center for Brain Science, Harvard University, Cambridge, Massachusetts, United States of America
- Department of Physiology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China
- * E-mail: (WY); (YZ)
| | - Taihong Wu
- Department of Organismic and Evolutionary Biology, Center for Brain Science, Harvard University, Cambridge, Massachusetts, United States of America
| | - Shasha Tu
- Department of Physiology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China
| | - Yuang Qin
- Department of Physiology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China
| | - Chengchen Shen
- Department of Physiology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China
| | - Jiangyun Li
- Department of Physiology, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China
| | - Myung-Kyu Choi
- Department of Organismic and Evolutionary Biology, Center for Brain Science, Harvard University, Cambridge, Massachusetts, United States of America
| | - Fengyun Duan
- Department of Organismic and Evolutionary Biology, Center for Brain Science, Harvard University, Cambridge, Massachusetts, United States of America
| | - Yun Zhang
- Department of Organismic and Evolutionary Biology, Center for Brain Science, Harvard University, Cambridge, Massachusetts, United States of America
- * E-mail: (WY); (YZ)
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14
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Maekawa T, Higashide D, Hara T, Matsumura K, Ide K, Miyatake T, Kimura KD, Takahashi S. Cross-species behavior analysis with attention-based domain-adversarial deep neural networks. Nat Commun 2021; 12:5519. [PMID: 34535659 PMCID: PMC8448872 DOI: 10.1038/s41467-021-25636-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2020] [Accepted: 08/19/2021] [Indexed: 01/12/2023] Open
Abstract
Since the variables inherent to various diseases cannot be controlled directly in humans, behavioral dysfunctions have been examined in model organisms, leading to better understanding their underlying mechanisms. However, because the spatial and temporal scales of animal locomotion vary widely among species, conventional statistical analyses cannot be used to discover knowledge from the locomotion data. We propose a procedure to automatically discover locomotion features shared among animal species by means of domain-adversarial deep neural networks. Our neural network is equipped with a function which explains the meaning of segments of locomotion where the cross-species features are hidden by incorporating an attention mechanism into the neural network, regarded as a black box. It enables us to formulate a human-interpretable rule about the cross-species locomotion feature and validate it using statistical tests. We demonstrate the versatility of this procedure by identifying locomotion features shared across different species with dopamine deficiency, namely humans, mice, and worms, despite their evolutionary differences.
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Affiliation(s)
- Takuya Maekawa
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan.
| | - Daiki Higashide
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan
| | - Takahiro Hara
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan
| | | | - Kaoru Ide
- Graduate School of Brain Science, Doshisha University, Kyoto, Japan
| | - Takahisa Miyatake
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | | | - Susumu Takahashi
- Graduate School of Brain Science, Doshisha University, Kyoto, Japan
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15
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Yang Y, Dong W, Wu Q, Wang D. Induction of Protective Response Associated with Expressional Alterations in Neuronal G Protein-Coupled Receptors in Polystyrene Nanoparticle Exposed Caenorhabditis elegans. Chem Res Toxicol 2021; 34:1308-1318. [PMID: 33650869 DOI: 10.1021/acs.chemrestox.0c00501] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
In this study, the association of expressional alterations in neuronal G protein-coupled receptors (GPCRs) with induction of protective response to polystyrene nanoparticles (PS-NPs) was investigated in Caenorhabditis elegans. On the basis of both phenotypic analysis and expression levels, the alterations in expressions of NPR-1, NPR-4, NPR-8, NPR-9, NPR-12, DCAR-1, GTR-1, DOP-2, SER-4, and DAF-37 in neuronal cells mediated the protective response to PS-NPs exposure. In neuronal cells, NPR-9, NPR-12, DCAR-1, and GTR-1 controlled the PS-NPs toxicity by activating or inhibiting JNK-1/JNK MAPK signaling. Neuronal NPR-8, NPR-9, DCAR-1, DOP-2, and DAF-37 controlled the PS-NPs toxicity by activating or inhibiting MPK-1/ERK MAPK signaling. Neuronal NPR-4, NPR-8, NPR-9, NPR-12, GTR-1, DOP-2, and DAF-37 controlled the PS-NPs toxicity by activating or inhibiting DBL-1/TGF-β signaling. Neuronal NPR-1, NPR-4, NPR-12, and GTR-1 controlled the PS-NPs toxicity by activating or inhibiting DAF-7/TGF-β signaling. Our data provides an important neuronal basis for induction of protective response to PS-NPs in C. elegans.
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Affiliation(s)
- Yunhan Yang
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Wenting Dong
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Qiuli Wu
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China
| | - Dayong Wang
- Key Laboratory of Environmental Medicine Engineering of Ministry of Education, Medical School, Southeast University, Nanjing 210009, China.,College of Biology and Food Engineering, Chongqing Three Gorges University, Wanzhou 404100, China.,Shenzhen Ruipuxun Academy for Stem Cell & Regenerative Medicine, Shenzhen, 518122, China
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16
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Van Damme S, De Fruyt N, Watteyne J, Kenis S, Peymen K, Schoofs L, Beets I. Neuromodulatory pathways in learning and memory: Lessons from invertebrates. J Neuroendocrinol 2021; 33:e12911. [PMID: 33350018 DOI: 10.1111/jne.12911] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 07/03/2020] [Revised: 09/27/2020] [Accepted: 10/01/2020] [Indexed: 12/13/2022]
Abstract
In an ever-changing environment, animals have to continuously adapt their behaviour. The ability to learn from experience is crucial for animals to increase their chances of survival. It is therefore not surprising that learning and memory evolved early in evolution and are mediated by conserved molecular mechanisms. A broad range of neuromodulators, in particular monoamines and neuropeptides, have been found to influence learning and memory, although our knowledge on their modulatory functions in learning circuits remains fragmentary. Many neuromodulatory systems are evolutionarily ancient and well-conserved between vertebrates and invertebrates. Here, we highlight general principles and mechanistic insights concerning the actions of monoamines and neuropeptides in learning circuits that have emerged from invertebrate studies. Diverse neuromodulators have been shown to influence learning and memory in invertebrates, which can have divergent or convergent actions at different spatiotemporal scales. In addition, neuromodulators can regulate learning dependent on internal and external states, such as food and social context. The strong conservation of neuromodulatory systems, the extensive toolkit and the compact learning circuits in invertebrate models make these powerful systems to further deepen our understanding of neuromodulatory pathways involved in learning and memory.
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Affiliation(s)
- Sara Van Damme
- Neural Signaling and Circuit Plasticity Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Nathan De Fruyt
- Neural Signaling and Circuit Plasticity Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Jan Watteyne
- Functional Genomics and Proteomics Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Signe Kenis
- Neural Signaling and Circuit Plasticity Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Katleen Peymen
- Functional Genomics and Proteomics Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Liliane Schoofs
- Functional Genomics and Proteomics Group, Department of Biology, KU Leuven, Leuven, Belgium
| | - Isabel Beets
- Neural Signaling and Circuit Plasticity Group, Department of Biology, KU Leuven, Leuven, Belgium
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17
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Yan J, Zhao N, Yang Z, Li Y, Bai H, Zou W, Zhang K, Huang X. A trade-off switch of two immunological memories in Caenorhabditis elegans reinfected by bacterial pathogens. J Biol Chem 2020; 295:17323-17336. [PMID: 33051209 PMCID: PMC7863904 DOI: 10.1074/jbc.ra120.013923] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/17/2020] [Revised: 09/25/2020] [Indexed: 11/06/2022] Open
Abstract
Recent studies have suggested that innate immune responses exhibit characteristics associated with memory linked to modulations in both vertebrates and invertebrates. However, the diverse evolutionary paths taken, particularly within the invertebrate taxa, should lead to similarly diverse innate immunity memory processes. Our understanding of innate immune memory in invertebrates primarily comes from studies of the fruit fly Drosophila melanogaster, the generality of which is unclear. Caenorhabditis elegans typically inhabits soil harboring a variety of fatal microbial pathogens; for this invertebrate, the innate immune system and aversive behavior are the major defensive strategies against microbial infection. However, their characteristics of immunological memory remains infantile. Here we discovered an immunological memory that promoted avoidance and suppressed innate immunity during reinfection with bacteria, which we revealed to be specific to the previously exposed pathogens. During this trade-off switch of avoidance and innate immunity, the chemosensory neurons AWB and ADF modulated production of serotonin and dopamine, which in turn decreased expression of the innate immunity-associated genes and led to enhanced avoidance via the downstream insulin-like pathway. Therefore, our current study profiles the immune memories during C. elegans reinfected by pathogenic bacteria and further reveals that the chemosensory neurons, the neurotransmitter(s), and their associated molecular signaling pathways are responsible for a trade-off switch between the two immunological memories.
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Affiliation(s)
- Jinyuan Yan
- State Key Lab for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China; Center Laboratory of the Second Hospital, Kunming Medical University, Kunming, Yunnan, China
| | - Ninghui Zhao
- Neurosurgery of the Second Hospital, Kunming Medical University, Kunming, Yunnan, China
| | - Zhongshan Yang
- Faculty of Basic Medicine, Yunnan University of Traditional Chinese Medicine, Kunming, Yunnan, China
| | - Yuhong Li
- State Key Lab for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China
| | - Hua Bai
- State Key Lab for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China; School of Public Health, Kunming Medical University, Kunming, Yunnan, China
| | - Wei Zou
- School of Public Health, Kunming Medical University, Kunming, Yunnan, China
| | - Keqin Zhang
- State Key Lab for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China
| | - Xiaowei Huang
- State Key Lab for Conservation and Utilization of Bio-Resources, Yunnan University, Kunming, Yunnan, China.
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18
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Maekawa T, Ohara K, Zhang Y, Fukutomi M, Matsumoto S, Matsumura K, Shidara H, Yamazaki SJ, Fujisawa R, Ide K, Nagaya N, Yamazaki K, Koike S, Miyatake T, Kimura KD, Ogawa H, Takahashi S, Yoda K. Deep learning-assisted comparative analysis of animal trajectories with DeepHL. Nat Commun 2020; 11:5316. [PMID: 33082335 PMCID: PMC7576204 DOI: 10.1038/s41467-020-19105-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2019] [Accepted: 09/25/2020] [Indexed: 11/09/2022] Open
Abstract
A comparative analysis of animal behavior (e.g., male vs. female groups) has been widely used to elucidate behavior specific to one group since pre-Darwinian times. However, big data generated by new sensing technologies, e.g., GPS, makes it difficult for them to contrast group differences manually. This study introduces DeepHL, a deep learning-assisted platform for the comparative analysis of animal movement data, i.e., trajectories. This software uses a deep neural network based on an attention mechanism to automatically detect segments in trajectories that are characteristic of one group. It then highlights these segments in visualized trajectories, enabling biologists to focus on these segments, and helps them reveal the underlying meaning of the highlighted segments to facilitate formulating new hypotheses. We tested the platform on a variety of trajectories of worms, insects, mice, bears, and seabirds across a scale from millimeters to hundreds of kilometers, revealing new movement features of these animals.
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Affiliation(s)
- Takuya Maekawa
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan.
| | - Kazuya Ohara
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan
| | - Yizhe Zhang
- Graduate School of Information Science and Technology, Osaka University, Osaka, Japan
| | | | - Sakiko Matsumoto
- Graduate School of Environmental Studies, Nagoya University, Nagoya, Japan
| | - Kentarou Matsumura
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Hisashi Shidara
- Department of Biological Sciences, Hokkaido University, Hokkaido, Japan
| | | | - Ryusuke Fujisawa
- Graduate School of Computer Science and Systems Engineering, Kyushu Institute of Technology, Iizuka, Japan
| | - Kaoru Ide
- Graduate School of Brain Science, Doshisha University, Kyotanabe, Japan
| | - Naohisa Nagaya
- Department of Intelligent Systems, Kyoto Sangyo University, Kyoto, Japan
| | - Koji Yamazaki
- Department of Forest Science, Tokyo University of Agriculture, Tokyo, Japan
| | - Shinsuke Koike
- Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Tokyo, Japan
| | - Takahisa Miyatake
- Graduate School of Environmental and Life Science, Okayama University, Okayama, Japan
| | - Koutarou D Kimura
- Graduate School of Science, Osaka University, Osaka, Japan
- Graduate School of Science, Nagoya City University, Nagoya, Japan
| | - Hiroto Ogawa
- Department of Biological Sciences, Hokkaido University, Hokkaido, Japan
| | - Susumu Takahashi
- Graduate School of Brain Science, Doshisha University, Kyotanabe, Japan
| | - Ken Yoda
- Graduate School of Environmental Studies, Nagoya University, Nagoya, Japan
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19
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Smith LL, Ryde IT, Hartman JH, Romersi RF, Markovich Z, Meyer JN. Strengths and limitations of morphological and behavioral analyses in detecting dopaminergic deficiency in Caenorhabditis elegans. Neurotoxicology 2019; 74:209-220. [PMID: 31323240 DOI: 10.1016/j.neuro.2019.07.002] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2019] [Revised: 06/27/2019] [Accepted: 07/10/2019] [Indexed: 12/21/2022]
Abstract
In order to develop a better understanding of the role environmental toxicants may play in the onset and progression of neurodegenerative diseases, it has become increasingly important to optimize sensitive methods for quickly screening toxicants to determine their ability to disrupt neuronal function. The nematode Caenorhabditis elegans can help with this effort. This species has an integrated nervous system producing behavioral function, provides easy access for molecular studies, has a rapid lifespan, and is an inexpensive model. This study focuses on methods of measuring neurodegeneration involving the dopaminergic system and the identification of compounds with actions that disrupt dopamine function in the model organism C. elegans. Several dopamine-mediated locomotory behaviors, Area Exploration, Body Bends, and Reversals, as well as Swimming-Induced Paralysis and Learned 2-Nonanone Avoidance, were compared to determine the best behavioral method for screening purposes. These behavioral endpoints were also compared to morphological scoring of neurodegeneration in the dopamine neurons. We found that in adult worms, Area Exploration is more advantageous than the other behavioral methods for identifying DA-deficient locomotion and is comparable to neuromorphological scoring outputs. For larval stage worms, locomotion was an unreliable endpoint, and neuronal scoring appeared to be the best method. We compared the wild-type N2 strain to the commonly used dat-1p::GFP reporter strains BY200 and BZ555, and we further characterized the dopamine-deficient strains, cat-2 e1112 and cat-2 n4547. In contrast to published results, we found that the cat-2 strains slowed on food almost as much as N2s. Both showed decreased levels of cat-2 mRNA and DA content, rather than none, with cat-2 e1112 having the greatest reduction in DA content in comparison to N2. Finally, we compared and contrasted strengths, limitations, cost, and equipment needs for all primary methods for analysis of the dopamine system in C. elegans.
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Affiliation(s)
- Latasha L Smith
- Department of Pharmacology and Cancer Biology, Duke University, Durham, NC, United States; Integrated Toxicology and Environmental Health Program, Duke University, Durham, NC, United States.
| | - Ian T Ryde
- Integrated Toxicology and Environmental Health Program, Duke University, Durham, NC, United States; Nicholas School of the Environment, Duke University, Durham, NC, United States.
| | - Jessica H Hartman
- Nicholas School of the Environment, Duke University, Durham, NC, United States.
| | - Riccardo F Romersi
- Nicholas School of the Environment, Duke University, Durham, NC, United States.
| | - Zachary Markovich
- Nicholas School of the Environment, Duke University, Durham, NC, United States.
| | - Joel N Meyer
- Integrated Toxicology and Environmental Health Program, Duke University, Durham, NC, United States; Nicholas School of the Environment, Duke University, Durham, NC, United States.
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20
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Yamazaki SJ, Ohara K, Ito K, Kokubun N, Kitanishi T, Takaichi D, Yamada Y, Ikejiri Y, Hiramatsu F, Fujita K, Tanimoto Y, Yamazoe-Umemoto A, Hashimoto K, Sato K, Yoda K, Takahashi A, Ishikawa Y, Kamikouchi A, Hiryu S, Maekawa T, Kimura KD. STEFTR: A Hybrid Versatile Method for State Estimation and Feature Extraction From the Trajectory of Animal Behavior. Front Neurosci 2019; 13:626. [PMID: 31316332 PMCID: PMC6611002 DOI: 10.3389/fnins.2019.00626] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2018] [Accepted: 05/31/2019] [Indexed: 12/19/2022] Open
Abstract
Animal behavior is the final and integrated output of brain activity. Thus, recording and analyzing behavior is critical to understand the underlying brain function. While recording animal behavior has become easier than ever with the development of compact and inexpensive devices, detailed behavioral data analysis requires sufficient prior knowledge and/or high content data such as video images of animal postures, which makes it difficult for most of the animal behavioral data to be efficiently analyzed. Here, we report a versatile method using a hybrid supervised/unsupervised machine learning approach for behavioral state estimation and feature extraction (STEFTR) only from low-content animal trajectory data. To demonstrate the effectiveness of the proposed method, we analyzed trajectory data of worms, fruit flies, rats, and bats in the laboratories, and penguins and flying seabirds in the wild, which were recorded with various methods and span a wide range of spatiotemporal scales-from mm to 1,000 km in space and from sub-seconds to days in time. We successfully estimated several states during behavior and comprehensively extracted characteristic features from a behavioral state and/or a specific experimental condition. Physiological and genetic experiments in worms revealed that the extracted behavioral features reflected specific neural or gene activities. Thus, our method provides a versatile and unbiased way to extract behavioral features from simple trajectory data to understand brain function.
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Affiliation(s)
- Shuhei J. Yamazaki
- Graduate School of Science, Osaka University, Toyonaka, Japan
- Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan
| | - Kazuya Ohara
- Graduate School of Information Science and Technology, Osaka University, Suita, Japan
| | - Kentaro Ito
- Department of Polar Science, The Graduate University for Advanced Studies, Tachikawa, Japan
| | - Nobuo Kokubun
- Department of Polar Science, The Graduate University for Advanced Studies, Tachikawa, Japan
- National Institute of Polar Research, Tachikawa, Japan
| | - Takuma Kitanishi
- Department of Physiology, Osaka City University Graduate School of Medicine, Osaka, Japan
- Center for Brain Science, Osaka City University Graduate School of Medicine, Osaka, Japan
- Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, Kawaguchi, Japan
| | | | - Yasufumi Yamada
- Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan
| | - Yosuke Ikejiri
- Graduate School of Science, Osaka University, Toyonaka, Japan
- Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan
| | - Fumie Hiramatsu
- Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Kosuke Fujita
- Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Yuki Tanimoto
- Graduate School of Science, Osaka University, Toyonaka, Japan
| | | | - Koichi Hashimoto
- Graduate School of Information Sciences, Tohoku University, Sendai, Japan
| | - Katsufumi Sato
- Atmosphere and Ocean Research Institute, The University of Tokyo, Kashiwa, Japan
| | - Ken Yoda
- Graduate School of Environmental Studies, Nagoya University, Nagoya, Japan
| | - Akinori Takahashi
- Department of Polar Science, The Graduate University for Advanced Studies, Tachikawa, Japan
- National Institute of Polar Research, Tachikawa, Japan
| | - Yuki Ishikawa
- Graduate School of Science, Nagoya University, Nagoya, Japan
| | | | - Shizuko Hiryu
- Faculty of Life and Medical Sciences, Doshisha University, Kyotanabe, Japan
| | - Takuya Maekawa
- Graduate School of Information Science and Technology, Osaka University, Suita, Japan
| | - Koutarou D. Kimura
- Graduate School of Science, Osaka University, Toyonaka, Japan
- Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan
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21
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Suo S, Harada K, Matsuda S, Kyo K, Wang M, Maruyama K, Awaji T, Tsuboi T. Sexually Dimorphic Regulation of Behavioral States by Dopamine in Caenorhabditis elegans. J Neurosci 2019; 39:4668-4683. [PMID: 30988167 PMCID: PMC6561698 DOI: 10.1523/jneurosci.2985-18.2019] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2018] [Revised: 03/22/2019] [Accepted: 03/26/2019] [Indexed: 11/21/2022] Open
Abstract
Sex differences in behavior allow animals to effectively mate and reproduce. However, the mechanism by which biological sex regulates behavioral states, which underlie the regulation of sex-shared behaviors, such as locomotion, is largely unknown. In this study, we studied sex differences in the behavioral states of Caenorhabditis elegans and found that males spend less time in a low locomotor activity state than hermaphrodites and that dopamine generates this sex difference. In males, dopamine reduces the low activity state by acting in the same pathway as polycystic kidney disease-related genes that function in male-specific neurons. In hermaphrodites, dopamine increases the low activity state by suppression of octopamine signaling in the sex-shared SIA neurons, which have reduced responsiveness to octopamine in males. Furthermore, dopamine promotes exploration both inside and outside of bacterial lawn (the food source) in males and suppresses it in hermaphrodites. These results demonstrate that sexually dimorphic signaling allows the same neuromodulator to promote adaptive behavior for each sex.SIGNIFICANCE STATEMENT The mechanisms that generate sex differences in sex-shared behaviors, including locomotion, are not well understood. We show that there are sex differences in the regulation of behavioral states in the model animal Caenorhabditis elegans Dopamine promotes the high locomotor activity state in males, which must search for mates to reproduce, and suppresses it in self-fertilizing hermaphrodites through distinct molecular mechanisms. This study demonstrates that sex-specific signaling generates sex differences in the regulation of behavioral states, which in turn modulates the locomotor activity to suit reproduction for each sex.
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Affiliation(s)
- Satoshi Suo
- Department of Pharmacology, Faculty of Medicine, Saitama Medical University, Saitama, 350-0495, Japan,
| | - Kazuki Harada
- Department of Life Sciences, Graduate School of Arts and Sciences, University of Tokyo, Tokyo, 153-8902, Japan
| | - Shogo Matsuda
- Department of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo, 113-0033, Japan, and
| | - Koki Kyo
- Department of Human Sciences, Obihiro University of Agriculture and Veterinary Medicine, Hokkaido, 080-8555, Japan
| | - Min Wang
- Department of Pharmacology, Faculty of Medicine, Saitama Medical University, Saitama, 350-0495, Japan
| | - Kei Maruyama
- Department of Pharmacology, Faculty of Medicine, Saitama Medical University, Saitama, 350-0495, Japan
| | - Takeo Awaji
- Department of Pharmacology, Faculty of Medicine, Saitama Medical University, Saitama, 350-0495, Japan
| | - Takashi Tsuboi
- Department of Life Sciences, Graduate School of Arts and Sciences, University of Tokyo, Tokyo, 153-8902, Japan
- Department of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo, 113-0033, Japan, and
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22
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Sakuma T, Nishi K, Kishimoto K, Nakagawa K, Karasuyama M, Umezu Y, Kajioka S, Yamazaki SJ, Kimura KD, Matsumoto S, Yoda K, Fukutomi M, Shidara H, Ogawa H, Takeuchi I. Efficient learning algorithm for sparse subsequence pattern-based classification and applications to comparative animal trajectory data analysis. Adv Robot 2019. [DOI: 10.1080/01691864.2019.1571438] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/27/2022]
Affiliation(s)
- Takuto Sakuma
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Kazuya Nishi
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Kaoru Kishimoto
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Kazuya Nakagawa
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Masayuki Karasuyama
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
- Center for Materials Research by Information Integration, National Institute for Materials Science, Tsukuba, Japan
- JST, PRESTO, Saitama, Japan
| | - Yuta Umezu
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Shinsuke Kajioka
- Department of Computer Science, Nagoya Institute of Technology, Nagoya, Japan
| | - Shuhei J. Yamazaki
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka, Japan
- Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan
| | - Koutarou D. Kimura
- Department of Biological Sciences, Graduate School of Science, Osaka University, Osaka, Japan
- Graduate School of Natural Sciences, Nagoya City University, Nagoya, Japan
| | - Sakiko Matsumoto
- Graduate School of Environmental Studies, Nagoya University, Nagoya, Japan
| | - Ken Yoda
- Graduate School of Environmental Studies, Nagoya University, Nagoya, Japan
| | | | - Hisashi Shidara
- Department of Biological Sciences, Faculty of Science, Hokkaido University, Sapporo, Japan
| | - Hiroto Ogawa
- Department of Biological Sciences, Faculty of Science, Hokkaido University, Sapporo, Japan
| | - Ichiro Takeuchi
- Center for Materials Research by Information Integration, National Institute for Materials Science, Tsukuba, Japan
- Department of Computer Science/Research Institute for Information Science, Nagoya Institute of Technology, Nagoya, Japan
- RIKEN Center for Advanced Intelligence Project, Tokyo, Japan
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23
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Koelle MR. Neurotransmitter signaling through heterotrimeric G proteins: insights from studies in C. elegans. WORMBOOK : THE ONLINE REVIEW OF C. ELEGANS BIOLOGY 2018; 2018:1-52. [PMID: 26937633 PMCID: PMC5010795 DOI: 10.1895/wormbook.1.75.2] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Neurotransmitters signal via G protein coupled receptors (GPCRs) to modulate activity of neurons and muscles. C. elegans has ∼150 G protein coupled neuropeptide receptor homologs and 28 additional GPCRs for small-molecule neurotransmitters. Genetic studies in C. elegans demonstrate that neurotransmitters diffuse far from their release sites to activate GPCRs on distant cells. Individual receptor types are expressed on limited numbers of cells and thus can provide very specific regulation of an individual neural circuit and behavior. G protein coupled neurotransmitter receptors signal principally via the three types of heterotrimeric G proteins defined by the G alpha subunits Gαo, Gαq, and Gαs. Each of these G alpha proteins is found in all neurons plus some muscles. Gαo and Gαq signaling inhibit and activate neurotransmitter release, respectively. Gαs signaling, like Gαq signaling, promotes neurotransmitter release. Many details of the signaling mechanisms downstream of Gαq and Gαs have been delineated and are consistent with those of their mammalian orthologs. The details of the signaling mechanism downstream of Gαo remain a mystery. Forward genetic screens in C. elegans have identified new molecular components of neural G protein signaling mechanisms, including Regulators of G protein Signaling (RGS proteins) that inhibit signaling, a new Gαq effector (the Trio RhoGEF domain), and the RIC-8 protein that is required for neuronal Gα signaling. A model is presented in which G proteins sum up the variety of neuromodulator signals that impinge on a neuron to calculate its appropriate output level.
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Affiliation(s)
- Michael R Koelle
- Department of Molecular Biophysics & Biochemistry, Yale University, New Haven CT 06520 USA
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24
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Schmeisser K, Parker JA. Nicotinamide-N-methyltransferase controls behavior, neurodegeneration and lifespan by regulating neuronal autophagy. PLoS Genet 2018; 14:e1007561. [PMID: 30192747 PMCID: PMC6191153 DOI: 10.1371/journal.pgen.1007561] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2017] [Revised: 10/16/2018] [Accepted: 07/09/2018] [Indexed: 12/14/2022] Open
Abstract
Nicotinamide N-methyl-transferase (NNMT) is an essential contributor to various metabolic and epigenetic processes, including the regulating of aging, cellular stress response, and body weight gain. Epidemiological studies show that NNMT is a risk factor for psychiatric diseases like schizophrenia and neurodegeneration, especially Parkinson's disease (PD), but its neuronal mechanisms of action remain obscure. Here, we describe the role of neuronal NNMT using C. elegans. We discovered that ANMT-1, the nematode NNMT ortholog, competes with the methyltransferase LCMT-1 for methyl groups from S-adenosyl methionine. Thereby, it regulates the catalytic capacities of LCMT-1, targeting NPRL-2, a regulator of autophagy. Autophagy is a core cellular, catabolic process for degrading cytoplasmic material, but very little is known about the regulation of autophagy during aging. We report an important role for NNMT in regulation of autophagy during aging, where high neuronal ANMT-1 activity induces autophagy via NPRL-2, which maintains neuronal function in old wild type animals and various disease models, also affecting longevity. In younger animals, however, ANMT-1 activity disturbs neuronal homeostasis and dopamine signaling, causing abnormal behavior. In summary, we provide fundamental insights into neuronal NNMT/ANMT-1 as pivotal regulator of behavior, neurodegeneration, and lifespan by controlling neuronal autophagy, potentially influencing PD and schizophrenia risk in humans.
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Affiliation(s)
- Kathrin Schmeisser
- Research Center of the Centre Hospitalier de l‘Université de Montréal (CRCHUM), Department of Neuroscience, Université de Montréal, Quebec, Canada
| | - J. Alex Parker
- Research Center of the Centre Hospitalier de l‘Université de Montréal (CRCHUM), Department of Neuroscience, Université de Montréal, Quebec, Canada
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25
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Yamazoe-Umemoto A, Iwasaki Y, Kimura KD. Measuring Spatiotemporal Dynamics of Odor Gradient for Small Animals by Gas Chromatography. Bio Protoc 2018; 8:e2797. [PMID: 34286017 DOI: 10.21769/bioprotoc.2797] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2018] [Revised: 03/27/2018] [Accepted: 04/11/2018] [Indexed: 11/02/2022] Open
Abstract
Odor is the most fundamental chemical stimulus that delivers information regarding food, mating partners, enemies, and danger in the surrounding environment. Research on odor response in animals is widespread, although studies on experimental systems in which the gradient of odor concentration is quantitatively measured has been quite limited. Here, we describe a method for measuring a gradient of odor concentration established by volatilization and diffusion in a relatively small enclosed space, which has been used widely in laboratories to analyze small model animals such as the nematode Caenorhabditis elegans and the fruit fly Drosophila melanogaster. We first vaporized known amounts of a liquid odorant 2-nonanone in a tank and subjected them to gas chromatographic analysis to obtain a calibration curve. Then, we aspirated a small amount of gas phase from a small hole on an agar plate and measured the odor concentration. By repeating this at different spatial and temporal points, we were able to detect a gradient of the odor concentration that increased over time. Furthermore, by applying these measured values to mathematical models of volatilization and diffusion, we were able to visualize an estimated dynamic change in odor concentration over an agar plate. Combining monitoring of odor concentration change in an agar plate with behavioral monitoring by machine vision will allow us to estimate how the brain computes information regarding odor concentration change in order to regulate behavior.
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Affiliation(s)
- Akiko Yamazoe-Umemoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
| | - Yuishi Iwasaki
- Department of Intelligent Systems Engineering, Ibaraki University, Hitachi, Ibaraki, Japan
| | - Koutarou D Kimura
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka, Japan
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26
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Cooper JF, Van Raamsdonk JM. Modeling Parkinson's Disease in C. elegans. JOURNAL OF PARKINSON'S DISEASE 2018; 8:17-32. [PMID: 29480229 PMCID: PMC5836411 DOI: 10.3233/jpd-171258] [Citation(s) in RCA: 87] [Impact Index Per Article: 14.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Accepted: 01/16/2018] [Indexed: 12/29/2022]
Abstract
Parkinson's disease (PD) is an adult onset neurodegenerative disease that is characterized by selective degeneration of neurons primarily in the substantia nigra. At present, the pathogenesis of PD is incompletely understood and there are no neuroprotective treatments available. Accurate animal models of PD provide the opportunity to elucidate disease mechanisms and identify therapeutic targets. This review focuses on C. elegans models of PD, including both genetic and toxicant models. This microscopic worm offers several advantages for the study of PD including ease of genetic manipulation, ability to complete experiments rapidly, low cost, and ability to perform large scale screens for disease modifiers. A number of C. elegans models of PD have been generated including transgenic worms that express α-synuclein or LRRK2, and worms with deletions in PRKN/pdr-1, PINK1/pink-1, DJ-1/djr-1.1/djr-1.2 and ATP13A2/catp-6. These worms have been shown to exhibit multiple phenotypic deficits including the loss of dopamine neurons, disruption of dopamine-dependent behaviors, increased sensitivity to stress, age-dependent aggregation, and deficits in movement. As a result, these phenotypes can be used as outcome measures to gain insight into disease pathogenesis and to identify disease modifiers. In this way, C. elegans can be used as an experimental tool to elucidate mechanisms involved in PD and to find novel therapeutic targets that can subsequently be validated in other models.
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Affiliation(s)
- Jason F. Cooper
- Laboratory of Aging and Neurodegenerative Disease, Center for Neurodegenerative Science, Van Andel Research Institute, Grand Rapids, MI, USA
| | - Jeremy M. Van Raamsdonk
- Laboratory of Aging and Neurodegenerative Disease, Center for Neurodegenerative Science, Van Andel Research Institute, Grand Rapids, MI, USA
- Department of Neurology and Neurosurgery, McGill University, Montreal, QC, Canada
- Metabolic Disorders and Complications Program, and Brain Repair and Integrative Neuroscience Program, Research Institute of the McGill University Health Centre, Montreal, QC, Canada
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27
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Urushihata T, Wakabayashi T, Osato S, Yamashita T, Matsuura T. Short-term nicotine exposure induces long-lasting modulation of gustatory plasticity in Caenorhabditis elegans. Biochem Biophys Rep 2017; 8:41-47. [PMID: 28955940 PMCID: PMC5613740 DOI: 10.1016/j.bbrep.2016.08.008] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2015] [Revised: 06/23/2016] [Accepted: 08/02/2016] [Indexed: 02/04/2023] Open
Abstract
Nicotine administration induces many effects on animal behavior. In wild-type Caenorhabditis elegans, gustatory plasticity results in reduced chemotaxis toward NaCl of otherwise attractive concentrations after pre-exposure to 100 mM NaCl in the absence of food. However, acute nicotine administration during a 15 min pre-exposure period inhibits gustatory plasticity, whereas chronic nicotine administration during worm development facilitates the plasticity. To investigate the relationship between the duration of nicotine administration and its effects, we exposed worms to nicotine for various periods during development. The modulatory effect of nicotine on gustatory plasticity was gradually switched from inhibition to facilitation with increased duration of nicotine administration. Moreover, inhibition of plasticity was sustained after relatively short-term chronic administration, with effects lasting for 45 h after the removal of nicotine. Similar to the acute inhibitory effect after 15 min nicotine pre-exposure, the inhibitory effect after short-term chronic administration was dependent on the nicotinic acetylcholine receptor subunit genes lev-1 and unc-29, and genes involved in serotonin biosynthesis bas-1 and tph-1. The impaired inhibition in bas-1 and tph-1mutants was recovered by exogenous serotonin, demonstrating that serotonin plays an important role in the long-lasting inhibitory effects of short-term chronic nicotine exposure. We analyzed gustatory plasticity of C. elegans after nicotine administration. Nicotine modulates gustatory plasticity in various ways. Nicotine inhibits gustatory plasticity after short-term chronic administration. The inhibitory effect was long-lasting even after removal of nicotine.
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Affiliation(s)
- Takuya Urushihata
- Department of Applied Chemistry and Biosciences, Faculty of Engineering, Iwate University, 4-3-5 Ueda, Morioka 020-8551, Japan.,Division of Bioprocess Engineering, United Graduate School of Agricultural Science, Iwate University, Morioka, Japan
| | - Tokumitsu Wakabayashi
- Department of Applied Chemistry and Biosciences, Faculty of Engineering, Iwate University, 4-3-5 Ueda, Morioka 020-8551, Japan.,Division of Bioprocess Engineering, United Graduate School of Agricultural Science, Iwate University, Morioka, Japan
| | - Shoichi Osato
- Department of Applied Chemistry and Biosciences, Faculty of Engineering, Iwate University, 4-3-5 Ueda, Morioka 020-8551, Japan
| | - Tetsuro Yamashita
- Division of Bioprocess Engineering, United Graduate School of Agricultural Science, Iwate University, Morioka, Japan
| | - Tetsuya Matsuura
- Department of Applied Chemistry and Biosciences, Faculty of Engineering, Iwate University, 4-3-5 Ueda, Morioka 020-8551, Japan.,Division of Bioprocess Engineering, United Graduate School of Agricultural Science, Iwate University, Morioka, Japan
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28
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Romanelli-Cedrez L, Carrera I, Otero L, Miranda-Vizuete A, Mariotti M, Alkema MJ, Salinas G. Selenoprotein T is required for pathogenic bacteria avoidance in Caenorhabditis elegans. Free Radic Biol Med 2017; 108:174-182. [PMID: 28347729 DOI: 10.1016/j.freeradbiomed.2017.03.021] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/16/2016] [Revised: 03/15/2017] [Accepted: 03/20/2017] [Indexed: 12/20/2022]
Abstract
Selenoprotein T (SELENOT) is an endoplasmatic reticulum (ER)-associated redoxin that contains the amino acid selenocysteine (Sec, U) within a CXXU motif within a thioredoxin-like fold. Its precise function in multicellular organisms is not completely understood although it has been shown in mammals to be involved in Ca2+ homeostasis, antioxidant and neuroendocrine functions. Here, we use the model organism C. elegans to address SELENOT function in a whole organism throughout its life cycle. C. elegans possess two genes encoding SELENOT protein orthologues (SELT-1.1 and SELT-1.2), which lack Sec and contain the CXXC redox motif instead. Our results show that a Sec→Cys replacement and a gene duplication were two major evolutionary events that occurred in the nematode lineage. We find that worm SELT-1.1 localizes to the ER and is expressed in different cell types, including the nervous system. In contrast, SELT-1.2 exclusively localizes in the cytoplasm of the AWB neurons. We find that selt-1.1 and selt-1.2 single mutants as well as the double mutant are viable, but the selt-1.1 mutant is compromised under rotenone-induced oxidative stress. We demonstrate that selt-1.1, but not selt-1.2, is required for avoidance to the bacterial pathogens Serratia marcescens and Pseudomonas aeruginosa. Aversion to the noxious signal 2-nonanone is also significantly impaired in selt-1.1, but not in selt-1.2 mutant animals. Our results suggest that selt-1.1 would be a redox transducer required for nociception and optimal organismal fitness. The results highlight C. elegans as a valuable model organism to study SELENOT-dependent processes.
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Affiliation(s)
- Laura Romanelli-Cedrez
- Worm Biology Laboratory, Institut Pasteur de Montevideo, Uruguay; Cátedra de Inmunología, Departamento de Biociencias, Facultad de Química, Universidad de la República, Montevideo, Uruguay
| | - Inés Carrera
- Worm Biology Laboratory, Institut Pasteur de Montevideo, Uruguay
| | - Lucía Otero
- Worm Biology Laboratory, Institut Pasteur de Montevideo, Uruguay
| | - Antonio Miranda-Vizuete
- Instituto de Biomedicina de Sevilla (IBIS), Hospital Universitario Virgen del Rocío/CS IC/Universidad de Sevilla, 41013 Sevilla, Spain
| | - Marco Mariotti
- Division of Genetics, Department of Medicine, Brigham and Women's Hospital and Harvard Medical School, Boston, MA, United States of America
| | - Mark J Alkema
- C. elegans Behavorial Genetics Laboratory, Neuroscience Department, University of Massachusetts Medical School, Worcester, MA, United States of America
| | - Gustavo Salinas
- Worm Biology Laboratory, Institut Pasteur de Montevideo, Uruguay; Cátedra de Inmunología, Departamento de Biociencias, Facultad de Química, Universidad de la República, Montevideo, Uruguay.
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29
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Maulik M, Mitra S, Bult-Ito A, Taylor BE, Vayndorf EM. Behavioral Phenotyping and Pathological Indicators of Parkinson's Disease in C. elegans Models. Front Genet 2017; 8:77. [PMID: 28659967 PMCID: PMC5468440 DOI: 10.3389/fgene.2017.00077] [Citation(s) in RCA: 62] [Impact Index Per Article: 8.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2017] [Accepted: 05/22/2017] [Indexed: 12/14/2022] Open
Abstract
Parkinson's disease (PD) is a neurodegenerative disorder with symptoms that progressively worsen with age. Pathologically, PD is characterized by the aggregation of α-synuclein in cells of the substantia nigra in the brain and loss of dopaminergic neurons. This pathology is associated with impaired movement and reduced cognitive function. The etiology of PD can be attributed to a combination of environmental and genetic factors. A popular animal model, the nematode roundworm Caenorhabditis elegans, has been frequently used to study the role of genetic and environmental factors in the molecular pathology and behavioral phenotypes associated with PD. The current review summarizes cellular markers and behavioral phenotypes in transgenic and toxin-induced PD models of C. elegans.
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Affiliation(s)
- Malabika Maulik
- Department of Chemistry and Biochemistry, University of Alaska FairbanksFairbanks, AK, United States
| | - Swarup Mitra
- Department of Chemistry and Biochemistry, University of Alaska FairbanksFairbanks, AK, United States
| | - Abel Bult-Ito
- Department of Biology and Wildlife, University of Alaska FairbanksFairbanks, AK, United States
| | - Barbara E Taylor
- Department of Biological Sciences, California State University, Long BeachLong Beach, CA, United States
| | - Elena M Vayndorf
- Institute of Arctic Biology, University of Alaska FairbanksFairbanks, AK, United States
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30
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Tanimoto Y, Yamazoe-Umemoto A, Fujita K, Kawazoe Y, Miyanishi Y, Yamazaki SJ, Fei X, Busch KE, Gengyo-Ando K, Nakai J, Iino Y, Iwasaki Y, Hashimoto K, Kimura KD. Calcium dynamics regulating the timing of decision-making in C. elegans. eLife 2017; 6:e21629. [PMID: 28532547 PMCID: PMC5441874 DOI: 10.7554/elife.21629] [Citation(s) in RCA: 40] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2016] [Accepted: 04/23/2017] [Indexed: 12/28/2022] Open
Abstract
Brains regulate behavioral responses with distinct timings. Here we investigate the cellular and molecular mechanisms underlying the timing of decision-making during olfactory navigation in Caenorhabditis elegans. We find that, based on subtle changes in odor concentrations, the animals appear to choose the appropriate migratory direction from multiple trials as a form of behavioral decision-making. Through optophysiological, mathematical and genetic analyses of neural activity under virtual odor gradients, we further find that odor concentration information is temporally integrated for a decision by a gradual increase in intracellular calcium concentration ([Ca2+]i), which occurs via L-type voltage-gated calcium channels in a pair of olfactory neurons. In contrast, for a reflex-like behavioral response, [Ca2+]i rapidly increases via multiple types of calcium channels in a pair of nociceptive neurons. Thus, the timing of neuronal responses is determined by cell type-dependent involvement of calcium channels, which may serve as a cellular basis for decision-making.
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Affiliation(s)
- Yuki Tanimoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Akiko Yamazoe-Umemoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Kosuke Fujita
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Yuya Kawazoe
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Yosuke Miyanishi
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Shuhei J Yamazaki
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
| | - Xianfeng Fei
- Faculty of Science and Technology, Tohoku Bunka Gakuen University, Sendai, Japan
| | - Karl Emanuel Busch
- Centre for Integrative Physiology, The University of Edinburgh, Edinburgh, United Kingdom
| | - Keiko Gengyo-Ando
- Graduate Shool of Science and Engineering, Brain and Body System Science Institute, Saitama University, Saitama, Japan
| | - Junichi Nakai
- Graduate Shool of Science and Engineering, Brain and Body System Science Institute, Saitama University, Saitama, Japan
| | - Yuichi Iino
- Department of Biological Sciences, Graduate School of Science, The University of Tokyo, Tokyo, Japan
| | - Yuishi Iwasaki
- Department of Intelligent Systems Engineering, Ibaraki University, Hitachi, Japan
| | - Koichi Hashimoto
- Graduate School of Information Sciences, Tohoku University, Sendai, Japan
| | - Koutarou D Kimura
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Japan
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31
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Ueoka Y, Hiroi M, Abe T, Tabata T. Suppression of a single pair of mushroom body output neurons in Drosophila triggers aversive associations. FEBS Open Bio 2017; 7:562-576. [PMID: 28396840 PMCID: PMC5377409 DOI: 10.1002/2211-5463.12203] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/22/2017] [Revised: 01/26/2017] [Accepted: 01/27/2017] [Indexed: 11/14/2022] Open
Abstract
Memory includes the processes of acquisition, consolidation and retrieval. In the study of aversive olfactory memory in Drosophila melanogaster, flies are first exposed to an odor (conditioned stimulus, CS+) that is associated with an electric shock (unconditioned stimulus, US), then to another odor (CS−) without the US, before allowing the flies to choose to avoid one of the two odors. The center for memory formation is the mushroom body which consists of Kenyon cells (KCs), dopaminergic neurons (DANs) and mushroom body output neurons (MBONs). However, the roles of individual neurons are not fully understood. We focused on the role of a single pair of GABAergic neurons (MBON‐γ1pedc) and found that it could inhibit the effects of DANs, resulting in the suppression of aversive memory acquisition during the CS− odor presentation, but not during the CS+ odor presentation. We propose that MBON‐γ1pedc suppresses the DAN‐dependent effect that can convey the aversive US during the CS− odor presentation, and thereby prevents an insignificant stimulus from becoming an aversive US.
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Affiliation(s)
- Yutaro Ueoka
- Department of Biological SciencesGraduate School of ScienceThe University of TokyoBunkyo‐kuJapan
- Institute of Molecular and Cellular BiosciencesThe University of TokyoBunkyo‐kuJapan
| | - Makoto Hiroi
- Institute of Molecular and Cellular BiosciencesThe University of TokyoBunkyo‐kuJapan
| | - Takashi Abe
- Institute of Molecular and Cellular BiosciencesThe University of TokyoBunkyo‐kuJapan
| | - Tetsuya Tabata
- Department of Biological SciencesGraduate School of ScienceThe University of TokyoBunkyo‐kuJapan
- Institute of Molecular and Cellular BiosciencesThe University of TokyoBunkyo‐kuJapan
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32
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Salim C, Rajini PS. Glucose-rich diet aggravates monocrotophos-induced dopaminergic neuronal dysfunction inCaenorhabditis elegans. J Appl Toxicol 2016; 37:772-780. [DOI: 10.1002/jat.3426] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/29/2016] [Revised: 11/07/2016] [Accepted: 11/07/2016] [Indexed: 12/21/2022]
Affiliation(s)
- Chinnu Salim
- Academy of Scientific and Innovative Research (AcSIR), Anusandhan Bhawan, New Delhi, India; Food Protectants and Infestation Control Department; CSIR-Central Food Technological Research Institute; Mysore 570 020 India
| | - P. S. Rajini
- Academy of Scientific and Innovative Research (AcSIR), Anusandhan Bhawan, New Delhi, India; Food Protectants and Infestation Control Department; CSIR-Central Food Technological Research Institute; Mysore 570 020 India
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Ardiel EL, Giles AC, Yu AJ, Lindsay TH, Lockery SR, Rankin CH. Dopamine receptor DOP-4 modulates habituation to repetitive photoactivation of a C. elegans polymodal nociceptor. ACTA ACUST UNITED AC 2016; 23:495-503. [PMID: 27634141 PMCID: PMC5026203 DOI: 10.1101/lm.041830.116] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2016] [Accepted: 04/27/2016] [Indexed: 11/29/2022]
Abstract
Habituation is a highly conserved phenomenon that remains poorly understood at the molecular level. Invertebrate model systems, like Caenorhabditis elegans, can be a powerful tool for investigating this fundamental process. Here we established a high-throughput learning assay that used real-time computer vision software for behavioral tracking and optogenetics for stimulation of the C. elegans polymodal nociceptor, ASH. Photoactivation of ASH with ChR2 elicited backward locomotion and repetitive stimulation altered aspects of the response in a manner consistent with habituation. Recording photocurrents in ASH, we observed no evidence for light adaptation of ChR2. Furthermore, we ruled out fatigue by demonstrating that sensory input from the touch cells could dishabituate the ASH avoidance circuit. Food and dopamine signaling slowed habituation downstream from ASH excitation via D1-like dopamine receptor, DOP-4. This assay allows for large-scale genetic and drug screens investigating mechanisms of nociception modulation.
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Affiliation(s)
- Evan L Ardiel
- DM Centre for Brain Health, University of British Columbia, Vancouver V6T 2B5, Canada
| | - Andrew C Giles
- DM Centre for Brain Health, University of British Columbia, Vancouver V6T 2B5, Canada
| | - Alex J Yu
- DM Centre for Brain Health, University of British Columbia, Vancouver V6T 2B5, Canada
| | - Theodore H Lindsay
- Institute of Neuroscience, University of Oregon, Eugene, Oregon 97403, USA
| | - Shawn R Lockery
- Institute of Neuroscience, University of Oregon, Eugene, Oregon 97403, USA
| | - Catharine H Rankin
- DM Centre for Brain Health, University of British Columbia, Vancouver V6T 2B5, Canada Department of Psychology, University of British Columbia, Vancouver V6T 1Z4, Canada
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In actio optophysiological analyses reveal functional diversification of dopaminergic neurons in the nematode C. elegans. Sci Rep 2016; 6:26297. [PMID: 27193056 PMCID: PMC4872038 DOI: 10.1038/srep26297] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/07/2015] [Accepted: 04/29/2016] [Indexed: 11/08/2022] Open
Abstract
Many neuronal groups such as dopamine-releasing (dopaminergic) neurons are functionally divergent, although the details of such divergence are not well understood. Dopamine in the nematode Caenorhabditis elegans modulates various neural functions and is released from four left-right pairs of neurons. The terminal identities of these dopaminergic neurons are regulated by the same genetic program, and previous studies have suggested that they are functionally redundant. In this study, however, we show functional divergence within the dopaminergic neurons of C. elegans. Because dopaminergic neurons of the animals were supposedly activated by mechanical stimulus upon entry into a lawn of their food bacteria, we developed a novel integrated microscope system that can auto-track a freely-moving (in actio) C. elegans to individually monitor and stimulate the neuronal activities of multiple neurons. We found that only head-dorsal pair of dopaminergic neurons (CEPD), but not head-ventral or posterior pairs, were preferentially activated upon food entry. In addition, the optogenetic activation of CEPD neurons alone exhibited effects similar to those observed upon food entry. Thus, our results demonstrated functional divergence in the genetically similar dopaminergic neurons, which may provide a new entry point toward understanding functional diversity of neurons beyond genetic terminal identification.
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Dopamine regulates body size in Caenorhabditis elegans. Dev Biol 2016; 412:128-138. [DOI: 10.1016/j.ydbio.2016.02.021] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2015] [Revised: 01/08/2016] [Accepted: 02/23/2016] [Indexed: 12/31/2022]
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Wakabayashi T, Sakata K, Togashi T, Itoi H, Shinohe S, Watanabe M, Shingai R. Navigational choice between reversal and curve during acidic pH avoidance behavior in Caenorhabditis elegans. BMC Neurosci 2015; 16:79. [PMID: 26584677 PMCID: PMC4653917 DOI: 10.1186/s12868-015-0220-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2015] [Accepted: 11/05/2015] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Under experimental conditions, virtually all behaviors of Caenorhabditis elegans are achieved by combinations of simple locomotion, including forward, reversal movement, turning by deep body bending, and gradual shallow turning. To study how worms regulate these locomotion in response to sensory information, acidic pH avoidance behavior was analyzed by using worm tracking system. RESULTS In the acidic pH avoidance, we characterized two types of behavioral maneuvers that have similar behavioral sequences in chemotaxis and thermotaxis. A stereotypic reversal-turn-forward sequence of reversal avoidance caused an abrupt random reorientation, and a shallow gradual turn in curve avoidance caused non-random reorientation in a less acidic direction to avoid the acidic pH. Our results suggest that these two maneuvers were each triggered by a distinct threshold pH. A simulation study using the two-distinct-threshold model reproduced the avoidance behavior of the real worm, supporting the presence of the threshold. Threshold pH for both reversal and curve avoidance was altered in mutants with reduced or enhanced glutamatergic signaling from acid-sensing neurons. CONCLUSIONS C. elegans employ two behavioral maneuvers, reversal (klinokinesis) and curve (klinotaxis) to avoid acidic pH. Unlike the chemotaxis in C. elegans, reversal and curve avoidances were triggered by absolute pH rather than temporal derivative of stimulus concentration in this behavior. The pH threshold is different between reversal and curve avoidance. Mutant studies suggested that the difference results from a differential amount of glutamate released from ASH and ASK chemosensory neurons.
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Affiliation(s)
- Tokumitsu Wakabayashi
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Kazumi Sakata
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Takuya Togashi
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Hiroaki Itoi
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Sayaka Shinohe
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Miwa Watanabe
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
| | - Ryuzo Shingai
- Department of Chemistry and Biological Sciences, Faculty of Engineering, Iwate University, Iwate, 020-8551, Japan.
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A proposed resolution to the paradox of drug reward: Dopamine's evolution from an aversive signal to a facilitator of drug reward via negative reinforcement. Neurosci Biobehav Rev 2015; 56:50-61. [PMID: 26116542 DOI: 10.1016/j.neubiorev.2015.06.016] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Revised: 06/09/2015] [Accepted: 06/19/2015] [Indexed: 11/21/2022]
Abstract
The mystery surrounding how plant neurotoxins came to possess reinforcing properties is termed the paradox of drug reward. Here we propose a resolution to this paradox whereby dopamine - which has traditionally been viewed as a signal of reward - initially signaled aversion and encouraged escape. We suggest that after being consumed, plant neurotoxins such as nicotine activated an aversive dopaminergic pathway, thereby deterring predatory herbivores. Later evolutionary events - including the development of a GABAergic system capable of modulating dopaminergic activity - led to the ability to down-regulate and 'control' this dopamine-based aversion. We speculate that this negative reinforcement system evolved so that animals could suppress aversive states such as hunger in order to attend to other internal drives (such as mating and shelter) that would result in improved organismal fitness.
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Yamazoe-Umemoto A, Fujita K, Iino Y, Iwasaki Y, Kimura KD. Modulation of different behavioral components by neuropeptide and dopamine signalings in non-associative odor learning of Caenorhabditis elegans. Neurosci Res 2015; 99:22-33. [PMID: 26068898 DOI: 10.1016/j.neures.2015.05.009] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/06/2015] [Revised: 05/15/2015] [Accepted: 05/18/2015] [Indexed: 12/20/2022]
Abstract
An animal's behavior is modulated by learning; however, the behavioral component modulated by learning and the mechanisms of this modulation have not been fully understood. We show here that two types of neural signalings are required for the modulation of different behavioral components in non-associative odor learning in the nematode Caenorhabditis elegans. We have previously found that C. elegans avoid the repulsive odor 2-nonanone, and preexposure to the odor for 1h enhances the avoidance behavior as a type of non-associative learning. Systematic quantitative analyses of behavioral components revealed that the odor preexposure caused increases in average duration of straight migration ("runs") only when the animals were migrating away from the odor source within a certain range of bearing, which likely corresponds to odor decrement. Further, genetic analyses revealed that the genes for neuropeptide or dopamine signalings are both required for the enhanced odor avoidance. Neuropeptide signaling genes were required for the preexposure-dependent increase in run duration. In contrast, dopamine signaling genes were required not for the increase in run duration but likely for maintenance of run direction. Our results suggests that multiple behavioral components are regulated by different neuromodulators even in non-associative learning in C. elegans.
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Affiliation(s)
- Akiko Yamazoe-Umemoto
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Kosuke Fujita
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan
| | - Yuichi Iino
- Department of Biological Sciences, Graduate School of Science, University of Tokyo, Bunkyo-ku, Tokyo 113-0033, Japan
| | - Yuishi Iwasaki
- Department of Intelligent System Engineering, Ibaraki University, Hitachi, Ibaraki 316-8511, Japan
| | - Koutarou D Kimura
- Department of Biological Sciences, Graduate School of Science, Osaka University, Toyonaka, Osaka 560-0043, Japan.
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Wang D, Yu Y, Li Y, Wang Y, Wang D. Dopamine receptors antagonistically regulate behavioral choice between conflicting alternatives in C. elegans. PLoS One 2014; 9:e115985. [PMID: 25536037 PMCID: PMC4275273 DOI: 10.1371/journal.pone.0115985] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/07/2014] [Accepted: 12/03/2014] [Indexed: 11/18/2022] Open
Abstract
Caenorhabditis elegans is a useful model to study the neuronal or molecular basis for behavioral choice, a specific form of decision-making. Although it has been implied that both D1-like and D2-like dopamine receptors may contribute to the control of decision-making in mammals, the genetic interactions between D1-like and D2-like dopamine receptors in regulating decision-making are still largely unclear. In the present study, we investigated the molecular control of behavioral choice between conflicting alternatives (diacetyl and Cu2+) by D1-like and D2-like dopamine receptors and their possible genetic interactions with C. elegans as the assay system. In the behavioral choice assay system, mutation of dop-1 gene encoding D1-like dopamine receptor resulted in the enhanced tendency to cross the Cu2+ barrier compared with wild-type. In contrast, mutations of dop-2 or dop-3 gene encoding D2-like dopamine receptor caused the weak tendency to cross the Cu2+ barrier compared with wild-type. During the control of behavioral choice, DOP-3 antagonistically regulated the function of DOP-1. The behavioral choice phenotype of dop-2; dop-1dop-3 triple mutant further confirmed the possible antagonistic function of D2-like dopamine receptor on D1-like dopamine receptor in regulating behavioral choice. The genetic assays further demonstrate that DOP-3 might act through Gαo signaling pathway encoded by GOA-1 and EGL-10, and DOP-1 might act through Gαq signaling pathway encoded by EGL-30 and EAT-16 to regulate the behavioral choice. DOP-1 might function in cholinergic neurons to regulate the behavioral choice, whereas DOP-3 might function in GABAergic neurons, RIC, and SIA neurons to regulate the behavioral choice. In this study, we provide the genetic evidence to indicate the antagonistic relationship between D1-like dopamine receptor and D2-like dopamine receptor in regulating the decision-making of animals. Our data will be useful for understanding the complex functions of dopamine receptors in regulating decision-making in animals.
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Affiliation(s)
- Daoyong Wang
- Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Medical School of Southeast University, Nanjing, 210009, China
| | - Yonglin Yu
- Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Medical School of Southeast University, Nanjing, 210009, China
| | - Yinxia Li
- Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Medical School of Southeast University, Nanjing, 210009, China
| | - Yang Wang
- Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Medical School of Southeast University, Nanjing, 210009, China
| | - Dayong Wang
- Key Laboratory of Developmental Genes and Human Disease in Ministry of Education, Medical School of Southeast University, Nanjing, 210009, China
- * E-mail:
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Barros AGDA, Bridi JC, de Souza BR, de Castro Júnior C, de Lima Torres KC, Malard L, Jorio A, de Miranda DM, Ashrafi K, Romano-Silva MA. Dopamine signaling regulates fat content through β-oxidation in Caenorhabditis elegans. PLoS One 2014; 9:e85874. [PMID: 24465759 PMCID: PMC3899111 DOI: 10.1371/journal.pone.0085874] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/30/2013] [Accepted: 12/06/2013] [Indexed: 11/26/2022] Open
Abstract
The regulation of energy balance involves an intricate interplay between neural mechanisms that respond to internal and external cues of energy demand and food availability. Compelling data have implicated the neurotransmitter dopamine as an important part of body weight regulation. However, the precise mechanisms through which dopamine regulates energy homeostasis remain poorly understood. Here, we investigate mechanisms through which dopamine modulates energy storage. We showed that dopamine signaling regulates fat reservoirs in Caenorhabditis elegans. We found that the fat reducing effects of dopamine were dependent on dopaminergic receptors and a set of fat oxidation enzymes. Our findings reveal an ancient role for dopaminergic regulation of fat and suggest that dopamine signaling elicits this outcome through cascades that ultimately mobilize peripheral fat depots.
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Affiliation(s)
- Alexandre Guimarães de Almeida Barros
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Jessika Cristina Bridi
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Bruno Rezende de Souza
- Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Célio de Castro Júnior
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Karen Cecília de Lima Torres
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Leandro Malard
- Departamento de Física, Instituto de Ciências Exatas da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Ado Jorio
- Departamento de Física, Instituto de Ciências Exatas da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Débora Marques de Miranda
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
| | - Kaveh Ashrafi
- Department of Physiology, University of California San Francisco, San Francisco, California, United States
| | - Marco Aurélio Romano-Silva
- Instituto Nacional de Ciência e Tecnologia de Medicina Molecular, Faculdade de Medicina da Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil
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Pandey P, Mersha MD, Dhillon HS. A synergistic approach towards understanding the functional significance of dopamine receptor interactions. J Mol Signal 2013; 8:13. [PMID: 24308343 PMCID: PMC3878971 DOI: 10.1186/1750-2187-8-13] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2012] [Accepted: 11/18/2013] [Indexed: 11/10/2022] Open
Abstract
The importance of the neurotransmitter dopamine (DA) in the nervous system is underscored by its role in a wide variety of physiological and neural functions in both vertebrates and invertebrates. Binding of dopamine to its membrane receptors initiates precise signaling cascades that result in specific cellular responses. Dopamine receptors belong to a super-family of G-protein coupled receptors (GPCRs) that are characterized by seven trans-membrane domains. In mammals, five dopamine receptors have been identified which are grouped into two different categories D1- and D2-like receptors. The interactions of DA receptors with other proteins including specific Gα subunits are critical in deciding the fate of downstream molecular events carried out by effector proteins. In this mini-review we provide a synopsis of known protein-protein interactions of DA receptors and a perspective on the potential synergistic utility of Caenorhabditis elegans as a model eukaryote with a comparatively simpler nervous system to gain insight on the neuronal and behavioral consequences of the receptor interactions.
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Affiliation(s)
| | | | - Harbinder S Dhillon
- Department of Biological Sciences, Center for Neuroscience Research, Delaware State University, Dover, DE 19901, USA.
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42
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Sasakura H, Tsukada Y, Takagi S, Mori I. Japanese studies on neural circuits and behavior of Caenorhabditis elegans. Front Neural Circuits 2013; 7:187. [PMID: 24348340 PMCID: PMC3842693 DOI: 10.3389/fncir.2013.00187] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2013] [Accepted: 11/03/2013] [Indexed: 01/25/2023] Open
Abstract
The nematode Caenorhabditis elegans is an ideal organism for studying neural plasticity and animal behaviors. A total of 302 neurons of a C. elegans hermaphrodite have been classified into 118 neuronal groups. This simple neural circuit provides a solid basis for understanding the mechanisms of the brains of higher animals, including humans. Recent studies that employ modern imaging and manipulation techniques enable researchers to study the dynamic properties of nervous systems with great precision. Behavioral and molecular genetic analyses of this tiny animal have contributed greatly to the advancement of neural circuit research. Here, we will review the recent studies on the neural circuits of C. elegans that have been conducted in Japan. Several laboratories have established unique and clever methods to study the underlying neuronal substrates of behavioral regulation in C. elegans. The technological advances applied to studies of C. elegans have allowed new approaches for the studies of complex neural systems. Through reviewing the studies on the neuronal circuits of C. elegans in Japan, we will analyze and discuss the directions of neural circuit studies.
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Affiliation(s)
- Hiroyuki Sasakura
- Laboratory of Molecular Neurobiology, Division of Biological Science, Nagoya University Nagoya, Japan
| | - Yuki Tsukada
- Laboratory of Molecular Neurobiology, Division of Biological Science, Nagoya University Nagoya, Japan
| | - Shin Takagi
- Laboratory of Brain Function and Structure, Division of Biological Science, Nagoya University Nagoya, Japan
| | - Ikue Mori
- Laboratory of Molecular Neurobiology, Division of Biological Science, Nagoya University Nagoya, Japan
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Suo S, Ishiura S. Dopamine modulates acetylcholine release via octopamine and CREB signaling in Caenorhabditis elegans. PLoS One 2013; 8:e72578. [PMID: 23977320 PMCID: PMC3745381 DOI: 10.1371/journal.pone.0072578] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2013] [Accepted: 07/10/2013] [Indexed: 11/18/2022] Open
Abstract
Animals change their behavior and metabolism in response to external stimuli. cAMP response element binding protein (CREB) is a signal-activated transcription factor that enables the coupling of extracellular signals and gene expression to induce adaptive changes. Biogenic amine neurotransmitters regulate CREB and such regulation is important for long-term changes in various nervous system functions, including learning and drug addiction. In Caenorhabditis elegans, the amine neurotransmitter octopamine activates a CREB homolog, CRH-1, in cholinergic SIA neurons, whereas dopamine suppresses CREB activation by inhibiting octopamine signaling in response to food stimuli. However, the physiological role of this activation is unknown. In this study, the effect of dopamine, octopamine, and CREB on acetylcholine signaling was analyzed using the acetylcholinesterase inhibitor aldicarb. Mutants with decreased dopamine signaling exhibited reduced acetylcholine signaling, and octopamine and CREB functioned downstream of dopamine in this regulation. This study demonstrates that the regulation of CREB by amine neurotransmitters modulates acetylcholine release from the neurons of C. elegans.
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Affiliation(s)
- Satoshi Suo
- Department of Life Sciences, Graduate School of Arts & Sciences, University of Tokyo, Tokyo, Japan.
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Perry CJ, Barron AB, Cheng K. Invertebrate learning and cognition: relating phenomena to neural substrate. WILEY INTERDISCIPLINARY REVIEWS. COGNITIVE SCIENCE 2013; 4:561-582. [PMID: 26304245 DOI: 10.1002/wcs.1248] [Citation(s) in RCA: 63] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/22/2013] [Revised: 05/28/2013] [Accepted: 07/06/2013] [Indexed: 02/04/2023]
Abstract
Diverse invertebrate species have been used for studies of learning and comparative cognition. Although we have gained invaluable information from this, in this study we argue that our approach to comparative learning research is rather deficient. Generally invertebrate learning research has focused mainly on arthropods, and most of that within the Hymenoptera and Diptera. Any true comparative analysis of the distribution of comparative cognitive abilities across phyla is hampered by this bias, and more fundamentally by a reporting bias toward positive results. To understand the limits of learning and cognition for a species, knowing what animals cannot do is at least as important as reporting what they can. Finally, much more effort needs to be focused on the neurobiological analysis of different types of learning to truly understand the differences and similarities of learning types. In this review, we first give a brief overview of the various forms of learning in invertebrates. We also suggest areas where further study is needed for a more comparative understanding of learning. Finally, using what is known of learning in honeybees and the well-studied honeybee brain, we present a model of how various complex forms of learning may be accounted for with the same neural circuitry required for so-called simple learning types. At the neurobiological level, different learning phenomena are unlikely to be independent, and without considering this it is very difficult to correctly interpret the phylogenetic distribution of learning and cognitive abilities. WIREs Cogn Sci 2013, 4:561-582. doi: 10.1002/wcs.1248 For further resources related to this article, please visit the WIREs website.
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Affiliation(s)
- Clint J Perry
- Department of Biological Sciences, Macquarie University, Sydney, NSW, Australia
| | - Andrew B Barron
- Department of Biological Sciences, Macquarie University, Sydney, NSW, Australia
| | - Ken Cheng
- Department of Biological Sciences, Macquarie University, Sydney, NSW, Australia
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Matsuura T, Izumi J, Hioki M, Nagaya H, Kobayashi Y. Sensory interaction between attractant diacetyl and repellent 2-nonanone in the nematode Caenorhabditis elegans. ACTA ACUST UNITED AC 2013; 319:285-95. [PMID: 23580469 DOI: 10.1002/jez.1795] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Revised: 11/12/2012] [Accepted: 03/01/2013] [Indexed: 11/08/2022]
Abstract
In the nematode Caenorhabditis elegans, the odorant diacetyl is sensed by AWA sensory neurons in the amphid sensory organ and elicits an attractive response, whereas 2-nonanone is sensed by AWB amphid sensory neurons and elicits an avoidance response. In the present study, we report that nematodes exhibit a sensory interaction between the attractant diacetyl and repellent 2-nonanone. In the presence of food, the chemotactic response to 0.01% diacetyl in nematodes preexposed to 0.1% diacetyl was greater than that in nonexposed naive nematodes (P < 0.05). The response to diacetyl was also greater in nematodes preexposed to 3% 2-nonanone in the presence of food than that in naive nematodes (P < 0.01). In the absence of food, the response to diacetyl in nematodes preexposed to diacetyl or 2-nonanone was significantly lower than that in nonexposed control nematodes (P < 0.01). The avoidance response to 10% 2-nonanone in nematodes preexposed to each odorant in the presence or absence of food was lower than that in nonexposed nematodes (P < 0.05). To confirm the validity of our results, the chemotactic responses to diacetyl and 2-nonanone were observed using che-3, odr-4, and odr-10 mutants, which exhibited defective sensitivity to diacetyl or 2-nonanone. From the results of our experiments, we conclude that nematodes exhibit a sensory interaction between diacetyl and 2-nonanone and speculate that this interaction is driven by higher-level neuronal circuits that underlie sensory integration.
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Affiliation(s)
- Tetsuya Matsuura
- Laboratory of Behavioral Physiology, Faculty of Engineering, Iwate University, Morioka, Japan. matsuura@iwate‐u.ac.jp
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46
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Behavioral plasticity, learning, and memory in C. elegans. Curr Opin Neurobiol 2013; 23:92-9. [DOI: 10.1016/j.conb.2012.09.005] [Citation(s) in RCA: 77] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2012] [Revised: 08/31/2012] [Accepted: 09/17/2012] [Indexed: 01/02/2023]
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Abstract
Dopamine is an ancient signaling molecule. It is responsible for maintaining the adaptability of behavioral outputs and is found across taxa. The following is a summary of the role of dopamine and the mechanisms of its function and dysfunction. We discuss our recent findings on dopaminergic control of behaviors in C. elegans and discuss its potential implications for work in the fields of C. elegans and Parkinson research.
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Kawazoe Y, Yawo H, Kimura KD. A simple optogenetic system for behavioral analysis of freely moving small animals. Neurosci Res 2012; 75:65-8. [PMID: 22613841 DOI: 10.1016/j.neures.2012.04.011] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2012] [Revised: 04/03/2012] [Accepted: 04/10/2012] [Indexed: 11/29/2022]
Abstract
We present a new and simple optogenetic system for the behavioral analysis of small animals. This system includes a strong LED ring array, a high-resolution CCD camera, and the improved channelrhodopsin ChRGR. We used the system for behavioral analysis with the nematode Caenorhabditis elegans as a model, and we found that it can stimulate ChRGR expressed in the body wall muscles of the animals to modulate the behavior. Our results indicate that this system may be suitable for optogenetic behavioral analysis of freely moving small animals under various conditions to understand the principles underlying brain functions.
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Affiliation(s)
- Yuya Kawazoe
- Department of Biological Sciences, Osaka University, Osaka 560-0043, Japan
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Komuniecki R, Harris G, Hapiak V, Wragg R, Bamber B. Monoamines activate neuropeptide signaling cascades to modulate nociception in C. elegans: a useful model for the modulation of chronic pain? INVERTEBRATE NEUROSCIENCE 2011; 12:53-61. [PMID: 22143253 DOI: 10.1007/s10158-011-0127-0] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/08/2011] [Accepted: 11/15/2011] [Indexed: 12/13/2022]
Abstract
Monoamines and neuropeptides interact to modulate key behaviors in most organisms. This review is focused on the interaction between octopamine (OA) and an array of neuropeptides in the inhibition of a simple, sensory-mediated aversive behavior in the C. elegans model system and describes the role of monoamines in the activation of global peptidergic signaling cascades. OA has been often considered the invertebrate counterpart of norepinephrine, and the review also highlights the similarities between OA inhibition in C. elegans and the noradrenergic modulation of pain in higher organisms.
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Affiliation(s)
- Rick Komuniecki
- Department of Biological Sciences, University of Toledo, 2801 W. Bancroft Street, Toledo, OH 43606, USA.
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