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Lydon KA, Grim C, Robertson MJ, Lipp EK. Draft genome sequence of multidrug-resistant Vibrio navarrensis strain DA9 isolated from a coastal canal in the Florida Keys (USA). Microbiol Resour Announc 2024; 13:e0078923. [PMID: 38095430 DOI: 10.1128/mra.00789-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Accepted: 11/22/2023] [Indexed: 01/18/2024] Open
Abstract
A presumptive Vibrio isolate with a multidrug resistance profile was isolated from surface seawater collected from a coastal canal in 2014 and identified as Vibrio navarrensis, designated as strain DA9. Here, we report a 5.1-Mb draft genome sequence of strain DA9 with a G + C content of 47.5%.
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Affiliation(s)
- Keri Ann Lydon
- Department of Environmental Health Sciences, College of Public Health, University of Georgia , Athens, Georgia, USA
| | - Christopher Grim
- Office of Regulatory Science, Center for Food Safety and Applied Nutrition, Food and Drug Administration , College Park, Maryland, USA
| | - Megan J Robertson
- Department of Environmental Health Sciences, College of Public Health, University of Georgia , Athens, Georgia, USA
| | - Erin K Lipp
- Department of Environmental Health Sciences, College of Public Health, University of Georgia , Athens, Georgia, USA
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Balbi T, Miglioli A, Montagna M, Piazza D, Risso B, Dumollard R, Canesi L. The biocide triclosan as a potential developmental disruptor in Mytilus early larvae. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:106342-106354. [PMID: 37726635 PMCID: PMC10579167 DOI: 10.1007/s11356-023-29854-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 09/08/2023] [Indexed: 09/21/2023]
Abstract
The broadly utilized biocide triclosan (TCS) is continuously discharged in water compartments worldwide, where it is detected at concentrations of ng-µg/L. Given its lipophilicity and bioaccumulation, TCS is considered potentially harmful to human and environmental health and also as a potential endocrine disruptor (ED) in different species. In aquatic organisms, TCS can induce a variety of effects: however, little information is available on its possible impact on invertebrate development. Early larval stages of the marine bivalve Mytilus galloprovincialis have been shown to be sensitive to environmental concentrations of a number of emerging contaminants, including EDs. In this work, the effects of TCS were first evaluated in the 48 h larval assay in a wide concentration range (0.001-1,000 μg/L). TCS significantly affected normal development of D-veligers (LOEC = 0.1 μg/L; EC50 = 236.1 μg/L). At selected concentrations, the mechanism of action of TCS was investigated. TCS modulated transcription of different genes involved in shell mineralization, endocrine signaling, ceramide metabolism, and biotransformation, depending on larval stage (24 and 48 h post-fertilization-hpf) and concentration (1 and 10 μg/L). At 48 hpf and 10 μg/L TCS, calcein staining revealed alterations in CaCO3 deposition, and polarized light microscopy showed the absence of shell birefringence due to the mineralized phase. Observations by scanning electron microscopy highlighted a variety of defects in shell formation from concentrations as low as 0.1 μg/L. The results indicate that TCS, at environmental exposure levels, can act as a developmental disruptor in early mussel larvae mainly by interfering with the processes of biomineralization.
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Affiliation(s)
- Teresa Balbi
- Department of Earth, Environmental and Life Sciences-DISTAV, University of Genoa, Genoa, Italy
- National Biodiversity Future Center, 90133, Palermo, Italy
| | - Angelica Miglioli
- UMR7009 Laboratoire de Biologie du Développement, Sorbonne Université/CNRS, Institut de La Mer, Villefranche-Sur-Mer, France
| | - Michele Montagna
- Department of Earth, Environmental and Life Sciences-DISTAV, University of Genoa, Genoa, Italy
| | - Davide Piazza
- Department of Earth, Environmental and Life Sciences-DISTAV, University of Genoa, Genoa, Italy
| | - Beatrice Risso
- Department of Earth, Environmental and Life Sciences-DISTAV, University of Genoa, Genoa, Italy
- UMR7009 Laboratoire de Biologie du Développement, Sorbonne Université/CNRS, Institut de La Mer, Villefranche-Sur-Mer, France
| | - Remi Dumollard
- UMR7009 Laboratoire de Biologie du Développement, Sorbonne Université/CNRS, Institut de La Mer, Villefranche-Sur-Mer, France
| | - Laura Canesi
- Department of Earth, Environmental and Life Sciences-DISTAV, University of Genoa, Genoa, Italy.
- National Biodiversity Future Center, 90133, Palermo, Italy.
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Oh S, Choi D, Cha CJ. Ecological processes underpinning microbial community structure during exposure to subinhibitory level of triclosan. Sci Rep 2019; 9:4598. [PMID: 30872712 PMCID: PMC6418085 DOI: 10.1038/s41598-019-40936-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Accepted: 02/21/2019] [Indexed: 11/30/2022] Open
Abstract
Ecological processes shaping the structure and diversity of microbial communities are of practical importance for managing the function and resilience of engineered biological ecosystems such as activated sludge processes. This study systematically evaluated the ecological processes acting during continuous exposure to a subinhibitory level of antimicrobial triclosan (TCS) as an environmental stressor. 16S rRNA gene-based community profiling revealed significant perturbations on the community structure and dramatic reduction (by 20-30%) in species diversity/richness compared to those under the control conditions. In addition, community profiling determined the prevalence of the deterministic processes overwhelming the ecological stochasticity. Analysis of both community composition and phenotypes in the TCS-exposed communities suggested the detailed deterministic mechanism: selection of TCS degrading (Sphingopyxis) and resistant (Pseudoxanthomonas) bacterial populations. The analysis also revealed a significant reduction of core activated sludge members, Chitinophagaceae (e.g., Ferruginibacter) and Comamonadaceae (e.g., Acidovorax), potentially affecting ecosystem functions (e.g., floc formation and nutrient removal) directly associated with system performance (i.e., wastewater treatment efficiency and effluent quality). Overall, our study provides new findings that inform the mechanisms underlying the community structure and diversity of activated sludge, which not only advances the current understanding of microbial ecology in activated sludge, but also has practical implications for the design and operation of environmental bioprocesses for treatment of antimicrobial-bearing waste streams.
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Affiliation(s)
- Seungdae Oh
- Department of Civil Engineering, Kyung Hee University, Yongin-si, Gyeonggi-do, Republic of Korea.
| | - Donggeon Choi
- Department of Civil Engineering, Kyung Hee University, Yongin-si, Gyeonggi-do, Republic of Korea
| | - Chang-Jun Cha
- Department of Systems Biotechnology and Center for Antibiotic Resistome, Chung-Ang University, Anseong, Gyeonggi-do, Republic of Korea
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Wang S, Lydon KA, White EM, Grubbs JB, Lipp EK, Locklin J, Jambeck JR. Biodegradation of Poly(3-hydroxybutyrate- co-3-hydroxyhexanoate) Plastic under Anaerobic Sludge and Aerobic Seawater Conditions: Gas Evolution and Microbial Diversity. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2018; 52:5700-5709. [PMID: 29672030 DOI: 10.1021/acs.est.7b06688] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Poly(3-hydroxybutyrate- co-3-hydroxyhexanoate) (poly(3HB- co-3HHx)) thermoplastics are a promising biodegradable alternative to traditional plastics for many consumer applications. Biodegradation measured by gaseous carbon loss of several types of poly(3HB- co-3HHx) plastic was investigated under anaerobic conditions and aerobic seawater environments. Under anaerobic conditions, the biodegradation levels of a manufactured sheet of poly(3HB- co-3HHx) and cellulose powder were not significantly different from one another over 85 days with 77.1 ± 6.1 and 62.9 ± 19.7% of the carbon converted to gas, respectively. However, the sheet of poly(3HB- co-3HHx) had significantly higher methane yield ( p ≤ 0.05), 483.8 ± 35.2 mL·g-1 volatile solid (VS), compared to cellulose controls, 290.1 ± 92.7 mL·g-1 VS, which is attributed to a greater total carbon content. Under aerobic seawater conditions (148-195 days at room temperature), poly(3HB- co-3HHx) sheets were statistically similar to cellulose for biodegradation as gaseous carbon loss (up to 83% loss in about 6 months), although the degradation rate was lower than that for cellulose. The microbial diversity was investigated in both experiments to explore the dominant bacteria associated with biodegradation of poly(3HB- co-3HHx) plastic. For poly(3HB- co-3HHx) treatments, Cloacamonales and Thermotogales were enriched under anaerobic sludge conditions, while Clostridiales, Gemmatales, Phycisphaerales, and Chlamydiales were the most enriched under aerobic seawater conditions.
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Affiliation(s)
- Shunli Wang
- College of Engineering , University of Georgia , Athens , Georgia 30602 , United States
- New Materials Institute , University of Georgia , Athens , Georgia 30602 , United States
| | - Keri A Lydon
- Department of Environmental Health Science , University of Georgia , Athens , Georgia 30602 , United States
| | - Evan M White
- New Materials Institute , University of Georgia , Athens , Georgia 30602 , United States
| | - Joe B Grubbs
- New Materials Institute , University of Georgia , Athens , Georgia 30602 , United States
| | - Erin K Lipp
- Department of Environmental Health Science , University of Georgia , Athens , Georgia 30602 , United States
| | - Jason Locklin
- College of Engineering , University of Georgia , Athens , Georgia 30602 , United States
- Department of Chemistry , University of Georgia , Athens , Georgia 30602 , United States
- New Materials Institute , University of Georgia , Athens , Georgia 30602 , United States
| | - Jenna R Jambeck
- College of Engineering , University of Georgia , Athens , Georgia 30602 , United States
- New Materials Institute , University of Georgia , Athens , Georgia 30602 , United States
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