1
|
Ostankova YV, Semenov AV, Zueva EB, Nogoybaeva KA, Kasymbekova KT, Tobokalova ST, Totolian AA. [The prevalence clinically significant virus mutations among patients with chronic viral hepatitis B.]. Klin Lab Diagn 2020; 65:61-66. [PMID: 32155009 DOI: 10.18821/0869-2084-2020-65-1-61-66] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Accepted: 12/16/2019] [Indexed: 11/17/2022]
Abstract
The prevalence of clinically significant virus mutations in patients with chronic viral hepatitis B from the Kyrgyz Republic was analyzed. Blood plasma samples of 64 patients with verified chronic viral hepatitis B obtained from Kyrgyzstan indigenous people were used in the work. Asymmetric PCR was carried out with extended oligonucleotides and the first reaction amplification product was further used in a new PCR with one of the nested pairs overlapping primers that flanked the entire HBV genome together, followed by sequencing. Based on the phylogenetic analysis of 64 HBV isolates obtained from patients from the Kyrgyz Republic, it was shown that only the genotype D virus was present in the examined group, the HBV subgenotype D1 (68.75%) prevailed compared with the HBV subgenotype D2 (18.75%) and subgenotype D3 (12.5%). For all subgenotypes, several independent infection sources are obvious, subclusters that include isolates from Kyrgyzstan, Kazakhstan and Uzbekistan are distinguished, as well as subclusters that include isolates only from Kyrgyzstan, which are less similar to isolates previously deposited in the international database, which probably indicates an independent HBV homologous evolution in the region. Clinically significant mutations were identified in 26.5% of patients. Including 12.5% with escape mutations that prevent the virus detection and / or allow the virus to replicate despite the vaccine (122K, 128V, 133I, 134N). Another 12.5% of the isolates are characterized by mutations that are independently associated with the liver cirrhosis and hepatocellular carcinoma development, including 21, 24, 27 nucleotides deletions in the Pre-S2 region and the S11F mutation in the PreCore region. In one case, unusual 236S and 250P mutations were found in the positions described as drug resistance sites of the P region associated with the resistance development to adefovir, tenofovir, and entecavir. The hepatitis B virus genetic structure analysis, early virus mutations detection in patients with chronic hepatitis B virus can help to choose the right vaccination strategy, antiviral and immunosuppressive therapy, as well as predict the clinical course and disease progression.
Collapse
Affiliation(s)
- Y V Ostankova
- Saint-Petersburg Pasteur Institute, 197191, Saint Petersburg, Russia
| | - A V Semenov
- Saint-Petersburg Pasteur Institute, 197191, Saint Petersburg, Russia.,Saint-Petersburg State Medical University n.a. acad. I.P. Pavlov, 197022, Saint Petersburg, Russia.,North-West State Medical University n.a. I.I. Mechnikov, 191015, Saint Petersburg, Russia
| | - E B Zueva
- Saint-Petersburg Pasteur Institute, 197191, Saint Petersburg, Russia
| | - K A Nogoybaeva
- Kyrgyz State Medical Institute of Retraining and Skill, 720040, Bishkek, Kyrgyz Republic
| | - K T Kasymbekova
- Kyrgyz State Medical Institute of Retraining and Skill, 720040, Bishkek, Kyrgyz Republic
| | - S T Tobokalova
- Kyrgyz State Medical Institute of Retraining and Skill, 720040, Bishkek, Kyrgyz Republic
| | - A A Totolian
- Saint-Petersburg Pasteur Institute, 197191, Saint Petersburg, Russia.,Saint-Petersburg State Medical University n.a. acad. I.P. Pavlov, 197022, Saint Petersburg, Russia
| |
Collapse
|
2
|
Abstract
Abstract
Background: The risk of mother to child transmission of hepatitis B virus (HBV) is recognized worldwide, a reason for which the World Health Organization aims to reduce this public health issue of major concern in the next ten years. The aim of our study was to detect circulating HBV genotypes in a selected population of pregnant women, as scientific evidence to recommend personalized antiviral therapy and to obtain updated epidemiological information.
Methods: HBsAg positive pregnant women were selected by the National Institute of Public Health Romania. Blood samples were collected after signing the informed consent. The HBV genotypes were tested by INNO LiPA HBV genotyping method.
Results. The D genotype was detected in 9/18 (50%) patients, genotype A in 3/18 (16.7%), and genotype F in 3/18 (16.7%) patients. Three patients had double infection, 11 had unique infection, and 4 had no detectable genotype.
Conclusion. This study confirmed the results of previous studies regarding HBV genotype circulation in our country, with the mention that F genotype was a new one for our area. These data are useful from an epidemiological point of view and also for therapeutical reasons, as it is known that therapy should be genotype guided.
Collapse
|
3
|
Mohsen RT, Al-azzawi RH, Ad'hiah AH. Hepatitis B virus genotypes among chronic hepatitis B patients from Baghdad, Iraq and their impact on liver function. GENE REPORTS 2019. [DOI: 10.1016/j.genrep.2019.100548] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
|