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Anum H, Tong Y, Cheng R. Different Preharvest Diseases in Garlic and Their Eco-Friendly Management Strategies. PLANTS (BASEL, SWITZERLAND) 2024; 13:267. [PMID: 38256820 PMCID: PMC10818302 DOI: 10.3390/plants13020267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/28/2023] [Revised: 12/15/2023] [Accepted: 01/04/2024] [Indexed: 01/24/2024]
Abstract
BACKGROUND garlic reproduces mainly through clove planting, as sexual reproduction via seeds is uncommon. Growers encounter challenges with pathogens due to the larger size and vegetative nature of seed cloves, as well as the storage conditions conducive to fungal growth. Some Phyto-pathogenic fungi, previously unrecognized as garlic infections, can remain latent within bulb tissues long after harvest. Although outwardly healthy, these infected bulbs may develop rot under specific conditions. AIM OF REVIEW planting diseased seed cloves can contaminate field soil, with some fungal and bacterial infections persisting for extended periods. The substantial size of seed cloves makes complete eradication of deeply ingrained infections difficult, despite the use of systemic fungicides during the preplanting and postharvest phases. Additionally, viruses, resistant to fungicides, persist in vegetative material. They are prevalent in much of the garlic used for planting, and their host vectors are difficult to eliminate. To address these challenges, tissue-culture techniques are increasingly employed to produce disease-free planting stock. Key scientific concepts of the review: garlic faces a concealed spectrum of diseases that pose a global challenge, encompassing fungal threats like Fusarium's vascular wilt and Alternaria's moldy rot, bacterial blights, and the elusive garlic yellow stripe virus. The struggle to eliminate deeply ingrained infections is exacerbated by the substantial size of seed cloves. Moreover, viruses persist in garlic seeds, spreading through carrier vectors, and remain unaffected by fungicides. This review emphasizes eco-friendly strategies to address these challenges, focusing on preventive measures, biocontrol agents, and plant extracts. Tissue-culture techniques emerge as a promising solution for generating disease-free garlic planting material. The review advocates for ongoing research to ensure sustainable garlic cultivation, recognizing the imperative of safeguarding this culinary staple from an array of fungal and viral threats.
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Affiliation(s)
- Hadiqa Anum
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (H.A.); (R.C.)
| | - Yuxin Tong
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (H.A.); (R.C.)
- Key Laboratory of Energy Conservation and Waste Management of Agricultural Structures, Ministry of Agriculture, Beijing 100081, China
| | - Ruifeng Cheng
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences, Beijing 100081, China; (H.A.); (R.C.)
- Key Laboratory of Energy Conservation and Waste Management of Agricultural Structures, Ministry of Agriculture, Beijing 100081, China
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Patra GK, Acharya GK, Panigrahi J, Mukherjee AK, Rout GR. The soil-borne fungal pathogen Athelia rolfsii: past, present, and future concern in legumes. Folia Microbiol (Praha) 2023; 68:677-690. [PMID: 37615849 DOI: 10.1007/s12223-023-01086-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2023] [Accepted: 08/17/2023] [Indexed: 08/25/2023]
Abstract
Legumes are ubiquitous, low-cost meals that are abundant in protein, vitamins, minerals, and calories. Several biotic constraints are to blame for the global output of legumes not meeting expectations. Fungi, in particular, are substantial restrictions that not only hinder production but also pose a serious health risk to both human and livestock consumption. Athelia rolfsii (Syn. Sclerotium rolfsii) is a dangerous pathogenic fungus that attacks most crops, causing massive yield losses. Legumes are no longer immune to this dreadful fungus, which can potentially result in a 100% yield loss. The initial disease symptoms based on the formation of brown color lesions at the point of infection and further development of mycelia, followed by yellowing and wilting of the whole plant. To tackle such situation, various strategies, i.e., management in cultural practices, disease-free plant growth, genetic changes, crop hybridization and in vitro culture techniques have been undertaken. This present review encapsulates the entire situation, from sclerotial dissemination through infection development and control in legume crops, with the goal of developing a tangible understanding of sustainable legume production improvements. Further study in this area might be led in an integrated manner as a result of this information, which could contribute to a better understanding of the processes of disease incidence, resistance mechanism, and its control, and fostering greater inventiveness in the production of legumes.
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Affiliation(s)
- Gyanendra K Patra
- Department of Agril. Biotechnology, College of Agriculture, Odisha University of Agriculture & Technology, Bhubaneswar, India
| | - Gobinda K Acharya
- Central Horticultural Experiment Station, ICAR-IIHR, Bhubaneswar, India
| | - J Panigrahi
- Department of Biotechnology, Berhampur University, Berhampur, India
| | | | - Gyana R Rout
- Department of Molecular Biology & Biotechnology, Institute of Agricultural Sciences, S'O'A Deemed to be University, Bhubaneswar, Odisha, India.
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Rhizosphere Microbiomes of Potato Cultivated under Bacillus subtilis Treatment Influence the Quality of Potato Tubers. Int J Mol Sci 2021; 22:ijms222112065. [PMID: 34769506 PMCID: PMC8584837 DOI: 10.3390/ijms222112065] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Revised: 10/27/2021] [Accepted: 11/02/2021] [Indexed: 12/26/2022] Open
Abstract
Plants serve as a niche for the growth and proliferation of a diversity of microorganisms. Soil microorganisms, which closely interact with plants, are increasingly being recognized as factors important to plant health. In this study, we explored the use of high-throughput DNA sequencing of the fungal ITS and bacterial 16S for characterization of the fungal and bacterial microbiomes following biocontrol treatment (DT) with Bacillus subtilis strain Bv17 relative to treatments without biocontrol (DC) during the potato growth cycle at three time points. A total of 5631 operational taxonomic units (OTUs) were identified from the 16S data, and 2236 OTUs were identified from the ITS data. The number of bacterial and fungal OTU in DT was higher than in DC and gradually increased during potato growth. In addition, indices such as Ace, Chao, Shannon, and Simpson were higher in DT than in DC, indicating greater richness and community diversity in soil following the biocontrol treatment. Additionally, the potato tuber yields improved without a measurable change in the bacterial communities following the B. subtilis strain Bv17 treatment. These results suggest that soil microbial communities in the rhizosphere are differentially affected by the biocontrol treatment while improving potato yield, providing a strong basis for biocontrol utilization in crop production.
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Abdelhafez AA, Eid KE, El-Abeid SE, Abbas MHH, Ahmed N, Mansour RRME, Zou G, Iqbal J, Fahad S, Elkelish A, Alamri S, Siddiqui MH, Mohamed I. Application of soil biofertilizers to a clayey soil contaminated with Sclerotium rolfsii can promote production, protection and nutritive status of Phaseolus vulgaris. CHEMOSPHERE 2021; 271:129321. [PMID: 33434829 DOI: 10.1016/j.chemosphere.2020.129321] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/13/2020] [Revised: 12/10/2020] [Accepted: 12/11/2020] [Indexed: 06/12/2023]
Abstract
Sclerotium rolfsii is a soil-borne fungus that causes big losses in productivity of various plant species including Phaseolus vulgaris L. The objectives of this study were to (1) evaluate the impacts of Sclerotium rolfsii on growth and production of common bean plants, (2) determine the effects of Sclerotium rolfsii on nutritive contents of beans, and (3) test the efficacy of bio-inoculants on suppressing plant infection with Sclerotium rolfsii. To fulfill these objectives, we used a coupled pot and field experimental approaches during two growing seasons. Common beans were inoculated with either arbuscular mycorrhizal fungi (Claroideoglomus etunicatum), Saccharomyces cerevisiae, or Trichoderma viride solely or in different combinations. Non-inoculated plants and fungicide treated ones were considered as reference treatments. Throughout these experiments, minimal amounts of rock phosphate were added during soil preparation for bio-inoculated treatments, while the non-inoculated reference treatments received a full dose of P as calcium superphosphate. Results revealed that all tested bioinoculants significantly raised the activities of plant defense enzymes i.e. chitinase, peroxidase and polyphenoloxidase as compared to non-inoculated control. Likewise, pre-, post- and plant survival percentages significantly increased due to these bio-inoculations. Increased survival percentages were attributed to the concurrent increases in uptake of N, P and Zn nutrients by plants treated with bioinoculants. In this concern, plant nutrients uptake was higher in combined than single bio-inoculant treatments. Moreover, the uptake values of plant nutrients owing to the combined bio-inoculants were higher than the corresponding ones achieved due to fungicide treatment. In conclusion, application of the tested bio-inoculants, especially the combined ones can be considered an eco-friendly approach that not only enhances plants resistance against infection with Sclerotium rolfsii but also improves plant nutritive status.
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Affiliation(s)
- Ahmed A Abdelhafez
- Eco-environmental Protection Research Institute, Shanghai Academy of Agricultural Science (SAAS), China; New Valley University, Faculty of Agriculture, Soils and Water Department, Egypt; National Committee of Soil Science, Academy of Scientific Research and Technology, Egypt
| | - Khaled E Eid
- Plant Pathology Department, Faculty of Agriculture, Benha University Egypt
| | - Sozan E El-Abeid
- Plant Pathology Research Institute, Agriculture Research Centre (ARC), Giza, Egypt
| | - Mohamed H H Abbas
- Soils and Water Department, Faculty of Agriculture, Benha University, Egypt
| | - Nevin Ahmed
- Plant Protection Department, Faculty of Agriculture, Benha University, Egypt
| | | | - Guoyan Zou
- Eco-environmental Protection Research Institute, Shanghai Academy of Agricultural Science (SAAS), China
| | - Javed Iqbal
- Department of Agronomy and Horticulture, University of Nebraska-Lincoln, Lincoln, NE, 68583, USA
| | - Shah Fahad
- Hainan Key Laboratory for Sustainable Utilization of Tropical Bioresource, College of Tropical Crops, Hainan University, Haikou, 570228, China; Department of Agronomy, The University of Haripur, Haripur, 22620, Pakistan.
| | - Amr Elkelish
- Botany Department, Faculty of Science, Suze Canal University, Ismailia, Egypt
| | - Saud Alamri
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 2455, Saudi Arabia
| | - Manzer H Siddiqui
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, 2455, Saudi Arabia
| | - Ibrahim Mohamed
- Soils and Water Department, Faculty of Agriculture, Benha University, Egypt.
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Costa Júnior PSP, Cardoso FP, Martins AD, Teixeira Buttrós VH, Pasqual M, Dias DR, Schwan RF, Dória J. Endophytic bacteria of garlic roots promote growth of micropropagated meristems. Microbiol Res 2020; 241:126585. [PMID: 32919224 DOI: 10.1016/j.micres.2020.126585] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2020] [Revised: 07/31/2020] [Accepted: 08/14/2020] [Indexed: 11/17/2022]
Abstract
Garlic (Allium sativum L.) is one of the crops whose economic importance has increased considerably in recent years in Brazil. The use of plant growth-promoting bacteria (PGPB) is a useful alternative for reducing the cost of agricultural inputs and, consequently, for increasing productivity. Therefore, the main objective of this work was to isolate and evaluate potential growth promoters in plants and plant pathogenic fungi growth inhibitors using endophytic bacteria from garlic roots and bacteria from the Agricultural Microbiology Culture Collection at the Federal University of Lavras. Besides verifying improvements in the growth and physiology of garlic meristems grown in vitro under the action of PGPB. Forty-eight endophytic bacteria were identified using matrix-assisted laser desorption/ionization-time of flight mass spectrometry based on the protein profile of each isolate. Four isolates were chosen according to their ability to fix nitrogen, to produce auxin and solubilize phosphate. The cultivation of garlic meristems in tissue culture with these bacteria was established at a population level of 106 CFU/mL. The evaluated criteria were: (1) the colonization capacity of the bacteria inside the garlic plants determined through scanning electron microscopy; (2) the chlorophyll content; and (3) the growth of garlic plants in vitro post-PGPB inoculation. Volatiles emitted by those isolates inhibited fungi growth. The inoculation of garlic meristems with Enterobacter cloacae and Burkholderia cepacia promoted an improvement in the growth and physiological attributes of garlic, indicating the feasibility of their application as plant growth promoters for commercial cultivation.
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Affiliation(s)
| | | | | | | | - Moacir Pasqual
- Agronomy Department, Federal University of Lavras, Minas Gerais, Brazil
| | | | - Rosane Freitas Schwan
- Biology Department, Microbiology Sector, Federal University of Lavras, Minas Gerais, Brazil
| | - Joyce Dória
- Agronomy Department, Federal University of Lavras, Minas Gerais, Brazil.
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