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de Souza Oliveira L, de Araújo Bitencourt J, Galdino JH, Sampaio I, Souza Carneiro PL, Antunes de Mello Affonso PR. Genetic Diversity in Natural Populations of the Near-Threatened Species Lignobrycon myersi (Characiformes, Triportheidae): Implications for Species Conservation. Zebrafish 2023; 20:271-279. [PMID: 38011710 DOI: 10.1089/zeb.2023.0036] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2023] Open
Abstract
The river basins of Brazil contain a highly diverse ichthyofauna of remarkable endemism, including several threatened species. Accordingly, Lignobrycon myersi is a fish species distributed only in a few rivers from the state of Bahia, northeastern Brazil. Since this species is classified as Near Threatened and is poorly studied, efforts to understand the genetic structure of populations and putative cryptic forms should help define efficient strategies of management and conservation. Herein, the molecular identification and the population genetic diversity of specimens of L. myersi across their range (Almada, Contas, and Cachoeira river basins) were assessed using mitochondrial markers (16S rDNA and D-Loop, respectively). The inferences based on phylogenetics, genetic distance, and species delimitation methods invariably identified all samples as L. myersi. In addition, sequencing of D-loop fragments revealed significant haplotype diversity and a considerable level of population genetic structure. Despite their geographic isolation, these data suggested that populations from Almada and Contas rivers represent a single evolutionary lineage that could be managed as a whole. In contrast, the population from Cachoeira River was highly differentiated from the others and should be managed separately as a unique and endemic unit, particularly focused on the conservation of native habitats.
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Affiliation(s)
| | | | - José Henrique Galdino
- Department of Biological Sciences, State University of Southwestern Bahia, Jequié, Brazil
| | - Iracilda Sampaio
- Department of Coastal Studies, Federal University of Pará, Bragança, Brazil
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Lozano AP, Lasso-Alcalá OM, Bittencourt PS, Taphorn DC, Perez N, Farias IP. A new species of Astronotus (Teleostei, Cichlidae) from the Orinoco River and Gulf of Paria basins, northern South America. Zookeys 2022; 1113:111-152. [PMID: 36762228 PMCID: PMC9848875 DOI: 10.3897/zookeys.1113.81240] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/29/2022] [Accepted: 05/15/2022] [Indexed: 11/12/2022] Open
Abstract
Based on morphological and molecular analysis of Astronotus species, a new species is described from the Orinoco River and Gulf of Paria basins in Venezuela and Colombia. Morphologically, it differs from Astronotuscrassipinnis and Astronotusocellatus in pre-orbital depth, caudal peduncle depth, head width, and caudal peduncle length, with significant differences in average percentage values. Osteologically, it differs from the two described species by lacking a hypurapophysis on the parahypural bone (hypural complex) and having two or three supraneural bones. Another characteristic that helps diagnose the new species is the morphology of the sagitta otolith, which is oval with crenulated dorsal and ventral margins and a rounded posterior edge. Genetically, the new species is distinct from all the other lineages previously proposed for the genus, delimited by five single locus species delimitation methods, and also has unique diagnostic nucleotides. Phylogenetic analyses support the monophyly of the new species as well as all other species/lineages. Astronotus species have considerable genetic, anatomical, and sagitta otolith shape differences, but have few significant traditional morphometric and meristic differences, because there is high variability in counts of spines, soft dorsal-fin rays, and lateral-line scales. It is clear that this new species is genetically and anatomically differentiated from all other species within the genus, and deserves recognition as a new valid species.
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Affiliation(s)
- Alfredo Perez Lozano
- Instituto de Ciências Biológicas e da Saúde, Universidade Federal de Alagoas (UFAL), Maceió, BrazilUniversidade Federal de AlagoasMaceióBrazil
| | - Oscar M. Lasso-Alcalá
- Museo de Historia Natural La Salle, Fundación La Salle de Ciencias Naturales (MHNLS), Caracas, VenezuelaMuseo de Historia Natural La SalleCaracasVenezuela
| | - Pedro S. Bittencourt
- Laboratório de Evolução e Genética Animal, Universidade Federal do Amazonas (UFAM), Manaus, BrazilUniversidade Federal do AmazonasManausBrazil
| | - Donald C. Taphorn
- BioCentro, Universidad Nacional Experimental de los Llanos Occidentales Ezequiel Zamora (UNELLEZ), Guanare, Portuguesa, VenezuelaUniversidad Nacional Experimental de los Llanos Occidentales Ezequiel ZamoraGuanareVenezuela
| | - Nayibe Perez
- BioCentro, Universidad Nacional Experimental de los Llanos Occidentales Ezequiel Zamora (UNELLEZ), Guanare, Portuguesa, VenezuelaUniversidad Nacional Experimental de los Llanos Occidentales Ezequiel ZamoraGuanareVenezuela
| | - Izeni Pires Farias
- Laboratório de Evolução e Genética Animal, Universidade Federal do Amazonas (UFAM), Manaus, BrazilUniversidade Federal do AmazonasManausBrazil
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Nascimento da Silva T, Sarmento-Soares LM, Martins-Pinheiro RF, Santos ACDA. Composition and distribution of the fish fauna in the Rio Jacuípe, northernmost tributary of the Rio Paraguaçu basin, Bahia, Brazil. STUDIES ON NEOTROPICAL FAUNA AND ENVIRONMENT 2021. [DOI: 10.1080/01650521.2021.1950970] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Thaís Nascimento da Silva
- Programa de Pós-graduação em Ecologia e Evolução, Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Bahia, Brasil
- Laboratório de Ictiologia, Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Bahia, Brasil
| | - Luisa Maria Sarmento-Soares
- Programa de Pós-graduação em Ecologia e Evolução, Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Bahia, Brasil
- Programa de Pós-Graduação em Biologia Animal, Universidade Federal do Espírito Santo, Vitória, Brasil
- Instituto Nossos Riachos, Estrada se Itacoatiara, Niterói, Brasil
| | | | - Alexandre Clistenes de Alcântara Santos
- Programa de Pós-graduação em Ecologia e Evolução, Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Bahia, Brasil
- Laboratório de Ictiologia, Departamento de Ciências Biológicas, Universidade Estadual de Feira de Santana, Bahia, Brasil
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Lira MGS, Berbel-Filho WM, Espírito-Santo HMV, Tatarenkov A, Avise JC, de Leaniz CG, Consuegra S, Lima SMQ. Filling the gaps: phylogeography of the self-fertilizing Kryptolebias species (Cyprinodontiformes: Rivulidae) along South American mangroves. JOURNAL OF FISH BIOLOGY 2021; 99:644-655. [PMID: 33846974 DOI: 10.1111/jfb.14753] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 04/07/2021] [Accepted: 04/09/2021] [Indexed: 06/12/2023]
Abstract
Mangrove killifishes of the genus Kryptolebias have been historically classified as rare because of their small size and cryptic nature. Major gaps in distribution knowledge across mangrove areas, particularly in South America, challenge the understanding of the taxonomic status, biogeographical patterns and genetic structuring of the lineages composing the self-fertilizing "Kryptolebias marmoratus species complex." In this study, the authors combined a literature survey, fieldwork and molecular data to fill major gaps of information about the distribution of mangrove killifishes across western Atlantic mangroves. They found that selfing mangrove killifishes are ubiquitously distributed across the Caribbean, Central and South American mangroves and report 14 new locations in South America, extending the range of both the "Central clade" and "Southern clade" lineages which overlap in the Amazon. Although substantial genetic differences were found between clades, the authors also found further genetic structuring within clades, with populations in Central America, north and northeast Brazil generally showing higher levels of genetic diversity compared to the clonal ones in southeast Brazil. The authors discuss the taxonomic status and update the geographical distribution of the Central and Southern clades, as well as potential dispersal routes and biogeographical barriers influencing the distribution of the selfing mangrove killifishes in the western Atlantic mangroves.
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Affiliation(s)
- Mateus G S Lira
- Laboratório de Ictiologia Sistemática e Evolutiva, Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande, Programa de Pós-Graduação em Sistemática e Evolução, Natal, Brazil
| | | | | | - Andrei Tatarenkov
- Department of Ecology and Evolutionary Biology, University of California, Irvine, California, USA
| | - John C Avise
- Department of Ecology and Evolutionary Biology, University of California, Irvine, California, USA
| | | | - Sofia Consuegra
- Department of Biosciences, College of Science, Swansea University, Swansea, UK
| | - Sergio M Q Lima
- Laboratório de Ictiologia Sistemática e Evolutiva, Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande, Programa de Pós-Graduação em Sistemática e Evolução, Natal, Brazil
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Tagliacollo VA, Dagosta FCP, Pinna MD, Reis RE, Albert JS. Assessing extinction risk from geographic distribution data in Neotropical freshwater fishes. NEOTROPICAL ICHTHYOLOGY 2021. [DOI: 10.1590/1982-0224-2021-0079] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
Abstract The IUCN Red List (RL) provides high-quality conservation assessments for individual species, yet the rate and scale of environmental deterioration globally challenges the conservation community to develop expedited methods for risk assessment. Here we compare threat assessments for 3,001 species of Neotropical freshwater fishes (NFF) in the IUCN–RL using readily accessible data types as proxies for extinction risk: geographic range, elevation, and species publication date. Furthermore, using geographic and taxonomic data alone, we generated preliminary conservation assessments for 2,334 NFF species currently awaiting IUCN assessment, identifying an additional 671 NFF species as potentially threatened. This number of potentially threatened species represents an increase of 59% over the number of species currently assigned to threat categories by the IUCN–RL. These results substantially expand the number of threatened NFF species from 422 currently on the IUCN RL to 1,093 species as threatened or potentially threatened, representing about 18% of all NFF species. Extinction risk is greater in species with smaller geographic ranges, which inhabit upland rivers, and which were described more recently. We propose the Central and Southern Andes, and Eastern Guiana Shield as priorities in the upcoming IUCN RL assessment of NFF species conservation risk.
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Affiliation(s)
| | | | - Mário de Pinna
- 1 Museu de Zoologia da Universidade de São Paulo, Brazil
| | - Roberto E. Reis
- Pontifícia Universidade Católica do Rio Grande do Sul, Brazil
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