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Gazoni T, Dorigon NS, da Silva MJ, Cholak LR, Haddad CFB, Parise-Maltempi PP. Chromosome Mapping of U2 snDNA in Species of Leptodactylus (Anura, Leptodactylidae). Cytogenet Genome Res 2021; 161:63-69. [PMID: 33823507 DOI: 10.1159/000515047] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2020] [Accepted: 02/05/2021] [Indexed: 11/19/2022] Open
Abstract
Small nuclear RNA (snRNA) is a class of molecules involved in the processing of pre-mRNA and in regulatory cell processes. snRNAs are always associated with a set of specific proteins. The complexes are referred to as small nuclear ribonucleoproteins, and spliceosome U RNAs are their most common snRNA components. The repetitive sequences of U snDNAs have been cytogenetically mapped in several species of Arthropoda, fishes, and mammals; however, their distribution remains unknown in amphibians. Here, we show results of FISH mapping of U2 snDNA repetitive sequences in species of the amphibian genus Leptodactylus to reveal the distribution patterns of this sequence in their karyotypes. The probe hybridized in the metacentric chromosome pair 6 in Leptodactylus fuscus, L. gracilis, L. latrans, L. chaquensis, L. petersii, L. podicipinus, and L. brevipes. A different pattern was observed in L. labyrinthicus with hybridization signals in 4 chromosome pairs. The same localization of U2 gene sequences in most of the species analyzed suggests a relatively conserved pattern and a similarity of the chromosome 6 among these species of Leptodactylus.
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Affiliation(s)
- Thiago Gazoni
- Departamento de Biologia Geral e Aplicada, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
| | - Nathália S Dorigon
- Departamento de Biologia Geral e Aplicada, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
| | - Marcelo J da Silva
- Departamento de Biologia Geral e Aplicada, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
| | - Luiza R Cholak
- Departamento de Biologia Geral e Aplicada, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
| | - Célio F B Haddad
- Departamento de Biodiversidade e Centro de Aquicultura, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
| | - Patricia P Parise-Maltempi
- Departamento de Biologia Geral e Aplicada, Instituto de Biociências, Universidade Estadual Paulista - UNESP, Rio Claro, Brazil
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The 5S rDNA in two Abracris grasshoppers (Ommatolampidinae: Acrididae): molecular and chromosomal organization. Mol Genet Genomics 2016; 291:1607-13. [PMID: 27106499 DOI: 10.1007/s00438-016-1204-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2016] [Accepted: 03/30/2016] [Indexed: 10/21/2022]
Abstract
The 5S ribosomal DNA (rDNA) sequences are subject of dynamic evolution at chromosomal and molecular levels, evolving through concerted and/or birth-and-death fashion. Among grasshoppers, the chromosomal location for this sequence was established for some species, but little molecular information was obtained to infer evolutionary patterns. Here, we integrated data from chromosomal and nucleotide sequence analysis for 5S rDNA in two Abracris species aiming to identify evolutionary dynamics. For both species, two arrays were identified, a larger sequence (named type-I) that consisted of the entire 5S rDNA gene plus NTS (non-transcribed spacer) and a smaller (named type-II) with truncated 5S rDNA gene plus short NTS that was considered a pseudogene. For type-I sequences, the gene corresponding region contained the internal control region and poly-T motif and the NTS presented partial transposable elements. Between the species, nucleotide differences for type-I were noticed, while type-II was identical, suggesting pseudogenization in a common ancestor. At chromosomal point to view, the type-II was placed in one bivalent, while type-I occurred in multiple copies in distinct chromosomes. In Abracris, the evolution of 5S rDNA was apparently influenced by the chromosomal distribution of clusters (single or multiple location), resulting in a mixed mechanism integrating concerted and birth-and-death evolution depending on the unit.
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Rocha MDF, Pine MB, Oliveira EFADS, Loreto V, Gallo RB, da Silva CRM, de Domenico FC, da Rosa R. Spreading of heterochromatin and karyotype differentiation in two Tropidacris Scudder, 1869 species (Orthoptera, Romaleidae). COMPARATIVE CYTOGENETICS 2015; 9:435-450. [PMID: 26312132 PMCID: PMC4547036 DOI: 10.3897/compcytogen.v9i3.5160] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 04/22/2015] [Accepted: 06/05/2015] [Indexed: 06/04/2023]
Abstract
Tropidacris Scudder, 1869 is a genus widely distributed throughout the Neotropical region where speciation was probably promoted by forest reduction during the glacial and interglacial periods. There are no cytogenetic studies of Tropidacris, and information allowing inference or confirmation of the evolutionary events involved in speciation within the group is insufficient. In this paper, we used cytogenetic markers in two species, Tropidacriscollaris (Stoll, 1813) and Tropidacriscristatagrandis (Thunberg, 1824), collected in different Brazilian biomes. Both species exhibited 2n=24,XX for females and 2n=23,X0 for males. All chromosomes were acrocentric. There were some differences in the karyotype macrostructure, e.g. in the chromosome size. A wide interspecific variation in the chromosome banding (C-banding and CMA3/DAPI staining) indicated strong differences in the distribution of repetitive DNA sequences. Specifically, Tropidacriscristatagrandis had a higher number of bands in relation to Tropidacriscollaris. FISH with 18S rDNA revealed two markings coinciding with the NORs in both species. However, two analyzed samples of Tropidacriscollaris revealed a heterozygous condition for the rDNA site of S10 pair. In Tropidacriscollaris, the histone H3 genes were distributed on three chromosome pairs, whereas in Tropidacriscristatagrandis, these genes were observed on 14 autosomes and on the X chromosome, always in terminal regions. Our results demonstrate that, although the chromosome number and morphology are conserved in the genus, Tropidacriscristatagrandis substantially differs from Tropidacriscollaris in terms of the distribution of repetitive sequences. The devastation and fragmentation of the Brazilian rainforest may have led to isolation between these species, and the spreading of these repetitive sequences could contribute to speciation within the genus.
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Affiliation(s)
| | - Mariana Bozina Pine
- Departamento de Biologia Geral, CCB, Universidade Estadual de Londrina (UEL), Londrina, Paraná, Brazil
| | | | - Vilma Loreto
- Departamento de Genética, CCB, Universidade Federal de Pernambuco, Recife, Pernambuco, Brazil
| | - Raquel Bozini Gallo
- Departamento de Biologia Geral, CCB, Universidade Estadual de Londrina (UEL), Londrina, Paraná, Brazil
| | | | | | - Renata da Rosa
- Departamento de Biologia Geral, CCB, Universidade Estadual de Londrina (UEL), Londrina, Paraná, Brazil
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