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Zhu K, Lü Z, Liu L, Gong L, Jiang L, Liu B. The complete mitochondrial genome of Hyporhamphus dussumieri (Beloniformes; hemiramphidae) and phylogenetic studies of Beloniformes. Mitochondrial DNA B Resour 2018; 3:1233-1234. [PMID: 33490575 PMCID: PMC7800999 DOI: 10.1080/23802359.2018.1532338] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Accepted: 08/31/2018] [Indexed: 10/30/2022] Open
Abstract
The Hyporhamphus dussumieri is a kind of minor commercial fishes, usually marketed fresh and dried salted. However, to date, there is a limited genetic resource available for this species. In this study, we assembled the whole mitochondrial genome of this species yielding a 16,542 bp circular assembly composed of the typical vertebrate mitochondrial features. It contains 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a putative control region, and one origin of replication on the light-strand. The overall base composition includes C(28.3%), A(28.9%), T(27.1%), and G(15.7%). Moreover, the 13 PCGs encode 3800 amino acids in total. The result of the phylogenetic tree supports H. dussumieri has a closest relationship with Hemiramphus far.
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Affiliation(s)
- Kehua Zhu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Zhenming Lü
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Liqin Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Li Gong
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Lihua Jiang
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Bingjian Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
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Zhu K, Lü Z, Liu B, Gong L, Jiang L, Liu L. The complete mitochondrial genome of Hemiramphus far (Beloniformes; Hemiramphidae) and phylogenetic studies of Beloniformes. Mitochondrial DNA B Resour 2018; 3:1237-1238. [PMID: 33474475 PMCID: PMC7800611 DOI: 10.1080/23802359.2018.1532340] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Accepted: 08/31/2018] [Indexed: 11/18/2022] Open
Abstract
The complete mitochondrial genome of this species was first determined in this study, which is 16,544 bp in length, the overall base composition includes C(27.0%), A(30.7%), T(27.1%) and G(15.2%). Moreover, the 13 protein-coding genes (PCGs) encode 3801 amino acids in total, 12 of which use the initiation codon ATG except COI uses GTG, most of them have TAA or TAG as the stop codon, whereas four protein-coding genes (COII, COIII, ND4 and Cytb) ended with the incomplete stop codon represented as a single T. The phylogenetic tree based on the neighbour-joining method was constructed to provide relationship within Beloniformes, the result supported that H. far was clustered with Hyporhamphus dussumieri.
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Affiliation(s)
- Kehua Zhu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Zhenming Lü
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Bingjian Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Li Gong
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Lihua Jiang
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
| | - Liqin Liu
- National Engineering Laboratory of Marine Germplasm Resources Exploration and Utilization, Zhejiang Ocean University, Zhoushan, China
- National Engineering Research Center for Facilitated Marine Aquaculture, Marine science and technology college, Zhejiang Ocean University, Zhoushan, China
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LEWALLEN ERICA, PITMAN ROBERTL, KJARTANSON SHAWNAL, LOVEJOY NATHANR. Molecular systematics of flyingfishes (Teleostei: Exocoetidae): evolution in the epipelagic zone. Biol J Linn Soc Lond 2010. [DOI: 10.1111/j.1095-8312.2010.01550.x] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Buddery A, Kemp A, Day RD, Tibbetts IR. Ultrastructure and the importance of wear in the dentition of the halfbeak (Pisces: Hemiramphidae) pharyngeal mill. J Morphol 2009; 270:357-66. [DOI: 10.1002/jmor.10696] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
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