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Gomes PT, Rosse IC, Moraes LÂG, Kalapothakis E, de Azevedo CS, Cardoso DC, Cristiano MP. Genetic diversity and relatedness in captive collared peccaries Dicotyles tajacu (Linnaeus, 1758) (Cetartiodactyla: Tayassuidae) estimated by microsatellite genotyping using high-throughput sequencing: Implications for their conservation and reintroduction. Zoo Biol 2023; 42:789-796. [PMID: 37466265 DOI: 10.1002/zoo.21796] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2022] [Revised: 05/04/2023] [Accepted: 07/07/2023] [Indexed: 07/20/2023]
Abstract
The global population of Dicotyles tajacu (Linnaeus, 1758) (Cetartiodactyla: Tayassuidae), commonly known as the collared peccary and distributed in the Neotropics, is currently in decline due to anthropogenic pressures. In this study, five microsatellite loci were used to genetically characterize a group of 20 captive-born collared peccaries intended for reintroduction. This study aimed to evaluate the genetic diversity and relatedness of captive individuals using microsatellite markers. The genetic data generated were used to evaluate the viability of the reintroduction and to propose measures for the management and conservation of this species. In this study, we found relatively high genetic diversity indices, indicating that the group was genetically diverse. Inbreeding coefficients with negative values were observed, indicating an excess of alleles in heterozygosis and an absence of inbreeding. One locus showed deviation from Hardy-Weinberg equilibrium, which may have been caused by the mixing of individuals from different origins. Relatedness analysis indicated that some individuals were highly related, with coefficients indicating they may be first-degree relatives. Our findings indicate that the studied group has enough genetic diversity to be released into nature, but the high individual relatedness found would require the adoption of strategies after the release of animals in the wild to ensure their persistence.
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Affiliation(s)
- Paula Teixeira Gomes
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Izinara Cruz Rosse
- Departamento de Farmácia, Programa de Pós-Graduação em Biotecnologia, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Laboratório Multiusuário de Bioinformática da Universidade Federal de Ouro Preto (UFOP), Núcleo de Pesquisa em Ciências Biológicas (NUPEB), Ouro Preto, Minas Gerais, Brazil
| | - Lauro Ângelo Gonçalves Moraes
- Laboratório Multiusuário de Bioinformática da Universidade Federal de Ouro Preto (UFOP), Núcleo de Pesquisa em Ciências Biológicas (NUPEB), Ouro Preto, Minas Gerais, Brazil
| | - Evanguedes Kalapothakis
- Departamento de Genética, Evolução e Ecologia, Laboratório de Biotecnologia e Marcadores Moleculares, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais (UFMG), Belo Horizonte, Minas Gerais, Brazil
| | - Cristiano Schetini de Azevedo
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Danon Clemes Cardoso
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
| | - Maykon Passos Cristiano
- Programa de Pós-Graduação em Ecologia de Biomas Tropicais, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
- Departamento de Biodiversidade Evolução e Meio Ambiente, Instituto de Ciências Exatas e Biológicas, Universidade Federal de Ouro Preto (UFOP), Ouro Preto, Minas Gerais, Brazil
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Oshima JEDF, Jorge MLS, Sobral-Souza T, Börger L, Keuroghlian A, Peres CA, Vancine MH, Collen B, Ribeiro MC. Setting priority conservation management regions to reverse rapid range decline of a key neotropical forest ungulate. Glob Ecol Conserv 2021. [DOI: 10.1016/j.gecco.2021.e01796] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022] Open
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Leonardo DE, Nogueira-Filho SLG, de Góes Maciel F, Biondo C, Mendl M, Nogueira SSDC. Third-party conflict interventions are kin biased in captive white-lipped peccaries (Mammalia, Tayassuidae). Behav Processes 2021; 193:104524. [PMID: 34592345 DOI: 10.1016/j.beproc.2021.104524] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Revised: 10/05/2020] [Accepted: 09/24/2021] [Indexed: 10/20/2022]
Abstract
Third-party interventions may regulate conflicts to reduce aggression and promote cohesion amongst group members, but are rarely documented in ungulates. The white-lipped peccary (Tayassu pecari) lives in mixed-sex herds of hundreds of individuals in Neotropical forests, which are likely to benefit from mechanisms that sustain social cohesiveness. We examined third-party conflict interventions between individuals in captive groups of white-lipped peccaries. During a period of 60 days, we recorded agonistic interactions and occurrences of third-party conflict interventions, and estimated the genetic relatedness between the individuals involved using multilocus microsatellite genotypes. Most third-party conflict interventions were by the dominant male of each group, resulting in conflict termination 100% of the time. Our results also revealed that white-lipped peccaries favour their closest relatives and that individuals showed lower levels of aggression towards kin than to non-kin, and interventions on behalf of kin were more frequent than on behalf of non-kin. Our findings support the idea that genetic relatedness is fundamental in both social structure and third-party conflict interventions in this species, allowing us to suggest that kin selection could have a key role in the evolution of social behaviour of white-lipped peccaries.
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Affiliation(s)
| | - Sérgio Luiz Gama Nogueira-Filho
- Laboratório de Etologia Aplicada, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil; National Institute of Science and Technology in Interdisciplinary and Transdisciplinary Studies in Ecology and Evolution (INCT IN-TREE), Bahia, Brazil
| | - Fernanda de Góes Maciel
- Centro de Ciências Naturais e Humanas (CCNH), Universidade Federal do ABC (UFABC), São Bernardo do Campo, São Paulo, Brazil
| | - Cibele Biondo
- Centro de Ciências Naturais e Humanas (CCNH), Universidade Federal do ABC (UFABC), São Bernardo do Campo, São Paulo, Brazil
| | - Michael Mendl
- Bristol Veterinary School, University of Bristol, Langford House, Langford, UK
| | - Selene Siqueira da Cunha Nogueira
- Laboratório de Etologia Aplicada, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil; National Institute of Science and Technology in Interdisciplinary and Transdisciplinary Studies in Ecology and Evolution (INCT IN-TREE), Bahia, Brazil.
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Beita CM, Murillo LFS, Alvarado LDA. Ecological corridors in Costa Rica: An evaluation applying landscape structure, fragmentation‐connectivity process, and climate adaptation. CONSERVATION SCIENCE AND PRACTICE 2021. [DOI: 10.1111/csp2.475] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022] Open
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Barros CH, Machado WM, Vieira RL, Allaman IB, Nogueira-Filho SL, Bittencourt RF, Snoeck PP. Use of the ACP® and BTS extenders for cooling at 15°C white-lipped peccary (Tayassu pecari) semen. PESQUISA VETERINÁRIA BRASILEIRA 2019. [DOI: 10.1590/1678-5150-pvb-6053] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Abstract
ABSTRACT: Knowledge about reproduction of white-lipped peccary is of great importance to assist with the conservation of this species and enable its rational use in captivity. This study aimed to evaluate the effect of ACP-103®, ACP-116® and BTS semen extenders on sperm viability during cooling of Tayassu pecari semen. Five ejaculates from four adult males were chilled. The animals were submitted to the protocols of sedation and anesthesia for semen collection by the electroejaculation method. After collection, the semen was macro- and microscopically assessed and diluted to reach 35x106 spermatozoa/mL in each of the three different extenders tested. The fresh-extended semen was packed in a BotuFLEX® thermal box to keep samples at 15°C for 24 hours. After cooling, the following semen parameters were analyzed: sperm motility, functional and structural integrity of sperm membranes, mitochondrial activity, chromatin condensation, and the thermoresistance test was performed. The parameters sperm motility, structural and functional integrity of sperm membranes, mitochondrial activity, and chromatin condensation were preserved after use of the extenders tested, and were similar to those of in natura semen (p>0.05). Curvilinear velocity (VCL) (p<0.05) was the only parameter with reduced values after cooling regardless of the extender used. The percentage of sperm with normal morphology was greater in samples cooled using the BTS extender (p<0.05). The ACP-103®, ACP-116® and BTS extenders can be used for the cooling and preservation of white-lipped peccary semen at 15°C for 24 hours.
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Genetic diversity and population structure of white-lipped peccaries (Tayassu pecari) in the Pantanal, Cerrado and Atlantic Forest from Brazil. Mamm Biol 2019. [DOI: 10.1016/j.mambio.2019.03.001] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Leite DA, Keuroghlian A, Rufo DA, Miyaki CY, Biondo C. Genetic evidence of promiscuity in a mammal without apparent sexual dimorphism, the white-lipped peccary (Tayassu pecari). Mamm Biol 2018. [DOI: 10.1016/j.mambio.2018.05.005] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Socio-genetic correlates of unbiased sex dispersal in a population of black capuchin monkeys (Sapajus nigritus). Acta Ethol 2017. [DOI: 10.1007/s10211-017-0277-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
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Melo ÉRDA, Gadelha JR, Silva MDNDD, Júnior APDS, Pontes ARM. Diversity, abundance and the impact of hunting on large mammals in two contrasting forest sites in northern amazon. WILDLIFE BIOLOGY 2015. [DOI: 10.2981/wlb.00095] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/01/2022]
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Reyna-Hurtado R, Beck H, Altrichter M, Chapman CA, Bonnell TR, Keuroghlian A, Desbiez AL, Moreira-Ramírez JF, O'Farrill G, Fragoso J, Naranjo EJ. What Ecological and Anthropogenic Factors Affect Group Size in White-lipped Peccaries (Tayassu pecari)? Biotropica 2015. [DOI: 10.1111/btp.12269] [Citation(s) in RCA: 21] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
Affiliation(s)
- Rafael Reyna-Hurtado
- El Colegio de la Frontera Sur; Av. Rancho Polígono 2A Lerma Campeche 24500 Mexico
| | - Harald Beck
- Department of Biological Sciences; Towson Univeristy; 8000 York Road Towson MD 21239 U.S.A
- Prescott College; 220 Grove Avenue Prescott AZ 86301 U.S.A
| | | | - Colin A. Chapman
- Department of Anthropology; McGill School of Environment; McGill University; 855 Sherbrooke street West Montreal QC H3A 2T7 Canada
| | - Tyler R. Bonnell
- Department of Anthropology; McGill School of Environment; McGill University; 855 Sherbrooke street West Montreal QC H3A 2T7 Canada
| | - Alexine Keuroghlian
- Wildlife Conservation Society Brazil; R. Spipe Calarge 2355 Campo Grande MS Brazil
| | - Arnaud L. Desbiez
- Conservation and Research Department; Royal Zoological Society of Scotland; Murrayfield Edinburgh EH12 6TS U.K
| | - Jose F. Moreira-Ramírez
- El Colegio de la Frontera Sur; Av. Rancho Polígono 2A Lerma Campeche 24500 Mexico
- Laboratório de Biologia da Conservação; Departamento de Ecologia; Universidade Estadual Paulista; Caixa Postal 199 13506-900 Rio Claro SP Brazil
| | - Georgina O'Farrill
- Ecology and Evolutionary Biology Department; Universidad de Toronto; Toronto ON M5S 3G5 Canada
| | - Jose Fragoso
- Department of Biology; Stanford University; Stanford CA 94305 U.S.A
| | - Eduardo J. Naranjo
- El Colegio de la Frontera Sur; Unidad San Cristobal de la Casas; Chiapas Mexico
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Biondo C, Izar P, Miyaki CY, Bussab VSR. Social structure of collared peccaries (Pecari tajacu): does relatedness matter? Behav Processes 2014; 109 Pt A:70-8. [PMID: 25173619 DOI: 10.1016/j.beproc.2014.08.018] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2014] [Revised: 08/19/2014] [Accepted: 08/20/2014] [Indexed: 11/26/2022]
Abstract
Relatedness is considered an important factor in shaping social structure as the association among kin might facilitate cooperation via inclusive fitness benefits. We addressed here the influence of relatedness on the social structure of a Neotropical ungulate, the collared peccary (Pecari tajacu). As peccaries are highly social and cooperative, live in stable cohesive herds and show certain degree of female philopatry and high mean relatedness within herds, we hypothesized that kin would be spatially closer and display more amicable and less agonistic interactions than non-kin. We recorded spatial association patterns and rates of interactions of two captive groups. Pairwise relatedness was calculated based on microsatellite data. As predicted, we found that kin were spatially closer than non-kin, which suggests that relatedness is a good predictor of spatial association in peccaries. However, relatedness did not predict the rates of social interactions. Although our results indirectly indicate some role of sex, age and familiarity, further studies are needed to clarify the factors that shape the rates of interactions in collared peccaries. This article is part of a Special Issue entitled: Neotropical Behaviour.
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Affiliation(s)
- Cibele Biondo
- Departamento de Psicologia Experimental, Instituto de Psicologia, Universidade de São Paulo, Av. Prof. Mello Moraes 1721, São Paulo, SP 05508-030, Brazil; Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, Rua do Matão 277, São Paulo, SP 05508-090, Brazil.
| | - Patrícia Izar
- Departamento de Psicologia Experimental, Instituto de Psicologia, Universidade de São Paulo, Av. Prof. Mello Moraes 1721, São Paulo, SP 05508-030, Brazil
| | - Cristina Y Miyaki
- Departamento de Genética e Biologia Evolutiva, Instituto de Biociências, Universidade de São Paulo, Rua do Matão 277, São Paulo, SP 05508-090, Brazil
| | - Vera S R Bussab
- Departamento de Psicologia Experimental, Instituto de Psicologia, Universidade de São Paulo, Av. Prof. Mello Moraes 1721, São Paulo, SP 05508-030, Brazil
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Range-wide declines of a key Neotropical ecosystem architect, the Near Threatened white-lipped peccary Tayassu pecari. ORYX 2011. [DOI: 10.1017/s0030605311000421] [Citation(s) in RCA: 60] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
AbstractWe report a range-wide status assessment of a key Neotropical ecosystem architect, the white-lipped peccary Tayassu pecari, categorized as Near Threatened on the IUCN Red List, using published information and unpublished data from 41 scientists in 15 range countries. We estimate that the white-lipped peccary has been extirpated in 21% of its historical range over the last 100 years, with reduced abundance and a low to medium probability of long-term survival in another 48% of its current range. We found major range declines in Argentina, Paraguay, southern Brazil, Colombia, Venezuela, north-east Brazil, Mexico and Costa Rica. This species is particularly at risk in more xeric ecosystems, especially the caatinga, cerrado and pampas. Hunting and habitat destruction are the most severe threats, although there are also unexplained sudden die-offs suggestive of disease. We evaluate our results in light of this species’ important interspecific interactions and its role as an ecosystem architect. One of our recommendations is that conservation efforts should focus on landscape conservation of large, continuous and ecologically intact areas containing a mosaic of different habitat types.
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