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Smith G, Kelly JE, Macias-Muñoz A, Butts CT, Martin RW, Briscoe AD. Evolutionary and structural analyses uncover a role for solvent interactions in the diversification of cocoonases in butterflies. Proc Biol Sci 2019; 285:rspb.2017.2037. [PMID: 29298934 DOI: 10.1098/rspb.2017.2037] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2017] [Accepted: 12/01/2017] [Indexed: 01/22/2023] Open
Abstract
Multi-omic approaches promise to supply the power to detect genes underlying disease and fitness-related phenotypes. Optimal use of the resulting profusion of data requires detailed investigation of individual candidate genes, a challenging proposition. Here, we combine transcriptomic and genomic data with molecular modelling of candidate enzymes to characterize the evolutionary history and function of the serine protease cocoonase. Heliconius butterflies possess the unique ability to feed on pollen; recent work has identified cocoonase as a candidate gene in pollen digestion. Cocoonase was first described in moths, where it aids in eclosure from the cocoon and is present as a single copy gene. In heliconiine butterflies it is duplicated and highly expressed in the mouthparts of adults. At least six copies of cocoonase are present in Heliconius melpomene and copy number varies across H. melpomene sub-populations. Most cocoonase genes are under purifying selection, however branch-site analyses suggest cocoonase 3 genes may have evolved under episodic diversifying selection. Molecular modelling of cocoonase proteins and examination of their predicted structures revealed that the active site region of each type has a similar structure to trypsin, with the same predicted substrate specificity across types. Variation among heliconiine cocoonases instead lies in the outward-facing residues involved in solvent interaction. Thus, the neofunctionalization of cocoonase duplicates appears to have resulted from the need for these serine proteases to operate in diverse biochemical environments. We suggest that cocoonase may have played a buffering role in feeding during the diversification of Heliconius across the neotropics by enabling these butterflies to digest protein from a range of biochemical milieux.
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Affiliation(s)
- G Smith
- Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697, USA .,School of Biological Sciences, Bangor University, Brambell Laboratories, Bangor, Gwynedd, UK
| | - J E Kelly
- Department of Chemistry, University of California, Irvine, CA 92697, USA
| | - A Macias-Muñoz
- Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697, USA
| | - C T Butts
- Department of Sociology, University of California, Irvine, CA 92697, USA.,Department of Statistics, University of California, Irvine, CA 92697, USA.,Department of Electrical Engineering and Computer Science, University of California, Irvine, CA 92697, USA
| | - R W Martin
- Department of Chemistry, University of California, Irvine, CA 92697, USA.,Department of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697, USA
| | - A D Briscoe
- Department of Ecology and Evolutionary Biology, University of California, Irvine, CA 92697, USA
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Merrill RM, Dasmahapatra KK, Davey JW, Dell'Aglio DD, Hanly JJ, Huber B, Jiggins CD, Joron M, Kozak KM, Llaurens V, Martin SH, Montgomery SH, Morris J, Nadeau NJ, Pinharanda AL, Rosser N, Thompson MJ, Vanjari S, Wallbank RWR, Yu Q. The diversification of Heliconius butterflies: what have we learned in 150 years? J Evol Biol 2015; 28:1417-38. [PMID: 26079599 DOI: 10.1111/jeb.12672] [Citation(s) in RCA: 89] [Impact Index Per Article: 9.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2015] [Revised: 06/03/2015] [Accepted: 06/07/2015] [Indexed: 11/27/2022]
Abstract
Research into Heliconius butterflies has made a significant contribution to evolutionary biology. Here, we review our understanding of the diversification of these butterflies, covering recent advances and a vast foundation of earlier work. Whereas no single group of organisms can be sufficient for understanding life's diversity, after years of intensive study, research into Heliconius has addressed a wide variety of evolutionary questions. We first discuss evidence for widespread gene flow between Heliconius species and what this reveals about the nature of species. We then address the evolution and diversity of warning patterns, both as the target of selection and with respect to their underlying genetic basis. The identification of major genes involved in mimetic shifts, and homology at these loci between distantly related taxa, has revealed a surprising predictability in the genetic basis of evolution. In the final sections, we consider the evolution of warning patterns, and Heliconius diversity more generally, within a broader context of ecological and sexual selection. We consider how different traits and modes of selection can interact and influence the evolution of reproductive isolation.
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Affiliation(s)
- R M Merrill
- Department of Zoology, University of Cambridge, Cambridge, UK.,Smithsonian Tropical Research Institute, Panama City, Panama
| | | | - J W Davey
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - D D Dell'Aglio
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - J J Hanly
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - B Huber
- Department of Biology, University of York, York, UK.,Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, Muséum national d'Histoire naturelle, Sorbonne Universités, Paris, France
| | - C D Jiggins
- Department of Zoology, University of Cambridge, Cambridge, UK.,Smithsonian Tropical Research Institute, Panama City, Panama
| | - M Joron
- Smithsonian Tropical Research Institute, Panama City, Panama.,Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, Muséum national d'Histoire naturelle, Sorbonne Universités, Paris, France.,Centre d'Ecologie Fonctionnelle et Evolutive, CEFE UMR 5175, CNRS - Université de Montpellier - Université Paul-Valéry Montpellier - EPHE, Montpellier 5, France
| | - K M Kozak
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - V Llaurens
- Institut de Systématique, Évolution, Biodiversité, ISYEB - UMR 7205 - CNRS, MNHN, UPMC, EPHE, Muséum national d'Histoire naturelle, Sorbonne Universités, Paris, France
| | - S H Martin
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - S H Montgomery
- Department of Genetics, Evolution and Environment, University College London, London, UK
| | - J Morris
- Department of Biology, University of York, York, UK
| | - N J Nadeau
- Department of Zoology, University of Cambridge, Cambridge, UK.,Department of Animal and Plant Sciences, University of Sheffield, Sheffield, UK
| | - A L Pinharanda
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - N Rosser
- Department of Biology, University of York, York, UK
| | - M J Thompson
- Department of Zoology, University of Cambridge, Cambridge, UK.,Department of Life Sciences, Natural History Museum, London, UK
| | - S Vanjari
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - R W R Wallbank
- Department of Zoology, University of Cambridge, Cambridge, UK
| | - Q Yu
- Department of Zoology, University of Cambridge, Cambridge, UK.,School of Life Sciences, Chongqing University, Shapingba District, Chongqing, China
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Caballero-Mendieta N, Cordero C. Enigmatic liaisons in Lepidoptera: a review of same-sex courtship and copulation in butterflies and moths. JOURNAL OF INSECT SCIENCE (ONLINE) 2012; 12:138. [PMID: 23452066 PMCID: PMC3646617 DOI: 10.1673/031.012.13801] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/28/2011] [Accepted: 04/12/2012] [Indexed: 06/01/2023]
Abstract
Same-sex sexual interactions (SSSI) have been observed in many animal groups and have intrigued evolutionists. In this paper, reports on SSSI in Lepidoptera are reviewed and evolutionary hypotheses that could explain these behaviors are discussed. SSSI have been documented in males of 25 species and in females from role-reversed populations of one species. Four types of SSSI have been reported: pupal guarding, courtship, copulation attempt, and copulation. Although the hypotheses cannot be tested with the limited data, evidence suggests that in some Lepidoptera SSSI could result from selection for imposing costs on other males, or could be a by-product of sexual selection favoring individuals that exhibit high sexual willingness. In agreement with both hypotheses, in the 17 species whose mating systems are known, there is intense competition for mates in the sex exhibiting SSSI. We propose lines of research on SSSI in Lepidoptera.
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Affiliation(s)
- Nubia Caballero-Mendieta
- Posgrado en Ciencias Biomédicas, Instituto de Ecología, Universidad Nacional Autónoma de México, Distrito Federal, México
| | - Carlos Cordero
- Departamento de Ecología Evolutiva, Instituto de Ecología, Universidad Nacional Autónoma de México, Distrito Federal, México
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