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Wu HY, Liu YH, He QX, Ye JW, Tian B. Differential distribution shifts in two subregions of East Asian subtropical evergreen broadleaved forests-a case of Magnoliaceae. FRONTIERS IN PLANT SCIENCE 2024; 14:1326207. [PMID: 38322424 PMCID: PMC10844446 DOI: 10.3389/fpls.2023.1326207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 12/27/2023] [Indexed: 02/08/2024]
Abstract
Aim East Asian subtropical evergreen broad-leaved forests (EBLFs) are composed of western and eastern subregions with different topographical and environmental conditions. The distribution shifts over time of plants in the two subregions are predicted to be different, but the difference has seldom been investigated. Methods Potential distributions of 53 Magnoliaceae species (22 in the western and 31 in the eastern subregion) during the last glacial maximum (LGM), present, and the 2070s were predicted using MaxEnt based on 58 environmental variables. The changes in the distribution range size and centroid over time were analyzed. Species-level potential habitats were overlaid to uncover species diversity distribution, and the distributions over time were overlaid to discover long-term refugia. Results At present, the potential distributions are significantly larger than those shown by the occurrence points. During the LGM, 20/22 species in the western subregion experienced increases in range size through downwards and southward migrations, while decreases in range size in the eastern subregion (27/31 species) were accompanied by northward and eastward migrations. In the future, range size declines and northward shifts will both be found; northwestward shifts will exist in most (20/22 species) species in the western subregion, while both northwest- and northeastward shifts will occur in the eastern subregion. The diversity hotspots experienced a slight southward shift in the past and upwards to the mountain region in the future in the western subregion; in the eastern subregion, shrinks occurred in eastern China in the past and shrinks were shown in all regions in the future. Long-term refugia-preserving diversity was found in the mountains across the entire EBLFs region. Main conclusions Significant differences in distribution shifts from past to present and similar distribution shifts from present to future are revealed in the two subregions. Species diversity in both subregions experienced no significant shifts from past to future, and Magnoliaceae plants could be preserved in mountainous regions throughout the EBLFs.
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Affiliation(s)
- Hai-Yang Wu
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China
| | - Yue-Han Liu
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China
| | - Qiu-Xiang He
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China
| | - Jun-Wei Ye
- Key Laboratory for Forest Resources Conservation and Utilization in the Southwest Mountains of China, Ministry of Education, Southwest Forestry University, Kunming, China
| | - Bin Tian
- National Plateau Wetlands Research Center, Southwest Forestry University, Kunming, China
- Yunnan Key Laboratory of Plateau Wetland Conservation Restoration and Ecological Services, Southwest Forestry University, Kunming, China
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Su T, He B, Zhao F, Jiang K, Lin G, Huang Z. Population genomics and phylogeography of
Colletes gigas
, a wild bee specialized on winter flowering plants. Ecol Evol 2022; 12:e8863. [PMID: 35494503 PMCID: PMC9035574 DOI: 10.1002/ece3.8863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 04/05/2022] [Indexed: 11/09/2022] Open
Abstract
Diet specialization may affect the population genetic structure of pollinators by reducing gene flow and driving genetic differentiation, especially in pollen‐specialist bees. Colletes gigas is a pollen‐specialist pollinator of Camellia oleifera, one of the most important staple oil crops in China. Ca. oleifera blooms in cold climates and contains special compounds that make it an unusable pollen source to other pollinators. Thus, C. gigas undoubtedly plays a key role as the main pollinator of Ca. oleifera, with biological and economic significance. Here, we use a population genomic approach to analyze the roles of geography and climate on the genetic structure, genetic diversity, and demographic history of C. gigas. A total of 1,035,407 SNPs were identified from a 582.77 Gb dataset. Clustering and phylogenetic analyses revealed a marked genetic structure, with individuals grouped into nine local clusters. A significant isolation by distance was detected by both the Mantel test (R = .866, p = .008) and linear regression (R2 = .616, p < .001). Precipitation and sunshine duration were positively and significantly (R ≥ .765, p ≤ .016) correlated with observed heterozygosity (Ho) and expected heterozygosity (He). These results showed that C. gigas populations had a distinct phylogeographic pattern determined by geographical distance and environmental factors (precipitation and sunshine duration). In addition, an analysis of paleogeographic dynamics indicated that C. gigas populations exhibited patterns of glacial expansion and interglacial contraction, likely resulting from post‐glacial habitat contraction and fragmentation. Our results indicated that the peculiar phylogeographic patterns in C. gigas populations may be related to their specialization under long‐term adaptation to host plants. This work improves our understanding of the population genetics in pollen‐specialist bees. The distinct genetic clusters identified in this study should be taken into consideration for the protection and utilization of this specialized crop pollinator.
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Affiliation(s)
- Tianjuan Su
- School of Life Sciences Jinggangshan University Ji'an China
| | - Bo He
- School of Life Sciences Jinggangshan University Ji'an China
- College of Life Sciences Anhui Normal University Wuhu China
| | - Fang Zhao
- School of Life Sciences Jinggangshan University Ji'an China
| | - Kai Jiang
- School of Life Sciences Jinggangshan University Ji'an China
| | - Gonghua Lin
- School of Life Sciences Jinggangshan University Ji'an China
| | - Zuhao Huang
- School of Life Sciences Jinggangshan University Ji'an China
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Tan S, Chen Y, Zhou G, Liu J. Transcriptome Analysis of Colletotrichum fructicola Infecting Camellia oleifera Indicates That Two Distinct Geographical Fungi Groups Have Different Destructive Proliferation Capacities Related to Purine Metabolism. PLANTS (BASEL, SWITZERLAND) 2021; 10:plants10122672. [PMID: 34961144 PMCID: PMC8708221 DOI: 10.3390/plants10122672] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Revised: 11/19/2021] [Accepted: 11/19/2021] [Indexed: 05/02/2023]
Abstract
Anthracnose, caused by Colletotrichum spp., is a significant disease affecting oil tea (Camellia oleifera Abel.). Extensive molecular studies have demonstrated that Colletotrichum fructicola is the dominant pathogen of oil tea anthracnose in China. This study aims to investigate differences in molecular processes and regulatory genes at a late stage of infection of C. fructicola, to aid in understanding differences in pathogenic mechanisms of C. fructicola of different geographic populations. We compared the pathogenicity of C. fructicola from different populations (Wuzhishan, Hainan province, and Shaoyang, Hunan province) and gene expression of representative strains of the two populations before and after inoculation in oil tea using RNA sequencing. The results revealed that C. fructicola from Wuzhishan has a more vital ability to impact oil tea leaf tissue. Following infection with oil tea leaves, up-regulated genes in the strains from two geographic populations were associated with galactosidase activity, glutamine family amino acid metabolism, arginine, and proline metabolism. Additionally, up-regulated gene lists associated with infection by Wuzhishan strains were significantly enriched in purine metabolism pathways, while Shaoyang strains were not. These results indicate that more transcriptional and translational activity and the greater regulation of the purine metabolism pathway in the C. fructicola of the Wuzhishan strain might contribute to its stronger pathogenicity.
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Affiliation(s)
- Shimeng Tan
- Key Laboratory of National Forestry and Grassland Administration on Control of Artificial Forest Diseases and Pests in South China, Central South University of Forestry and Technology, Changsha 410004, China; (S.T.); (Y.C.); (G.Z.)
- Hunan Provincial Key Laboratory for Control of Forest Diseases and Pests, Central South University of Forestry and Technology, Changsha 410004, China
- Key Laboratory for Non-Wood Forest Cultivation and Conservation of Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
- College of Biological Science and Technology, Central South University of Forestry and Technology, Changsha 410004, China
| | - Yanying Chen
- Key Laboratory of National Forestry and Grassland Administration on Control of Artificial Forest Diseases and Pests in South China, Central South University of Forestry and Technology, Changsha 410004, China; (S.T.); (Y.C.); (G.Z.)
- Hunan Provincial Key Laboratory for Control of Forest Diseases and Pests, Central South University of Forestry and Technology, Changsha 410004, China
- Key Laboratory for Non-Wood Forest Cultivation and Conservation of Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China
| | - Guoying Zhou
- Key Laboratory of National Forestry and Grassland Administration on Control of Artificial Forest Diseases and Pests in South China, Central South University of Forestry and Technology, Changsha 410004, China; (S.T.); (Y.C.); (G.Z.)
- Hunan Provincial Key Laboratory for Control of Forest Diseases and Pests, Central South University of Forestry and Technology, Changsha 410004, China
- Key Laboratory for Non-Wood Forest Cultivation and Conservation of Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
- College of Biological Science and Technology, Central South University of Forestry and Technology, Changsha 410004, China
| | - Junang Liu
- Key Laboratory of National Forestry and Grassland Administration on Control of Artificial Forest Diseases and Pests in South China, Central South University of Forestry and Technology, Changsha 410004, China; (S.T.); (Y.C.); (G.Z.)
- Hunan Provincial Key Laboratory for Control of Forest Diseases and Pests, Central South University of Forestry and Technology, Changsha 410004, China
- Key Laboratory for Non-Wood Forest Cultivation and Conservation of Ministry of Education, Central South University of Forestry and Technology, Changsha 410004, China
- College of Forestry, Central South University of Forestry and Technology, Changsha 410004, China
- Correspondence:
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Predicting Potential Distribution and Evaluating Suitable Soil Condition of Oil Tea Camellia in China. FORESTS 2018. [DOI: 10.3390/f9080487] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/05/2023]
Abstract
Oil tea Camellia, as a major cash and oil crop, has a high status in the forestry cultivation systems in China. To meet the current market demand for oil tea Camellia, its potential distribution and suitable soil condition was researched, to instruct its cultivation and popularization. The potential distribution of oil tea Camellia in China was predicted by the maximum entropy model, using global environmental and soil databases. Then, we collected 10-year literature data about oil tea Camellia soil and applied multiple imputation and factor modeling for an in-depth analysis of soil suitability for growing of oil tea Camellia. The prediction indicated that oil tea Camellia was mainly distributed in Hunan, Jiangxi, Zhejiang, Hainan, East Hubei, Southwest Anhui and most of Guangdong. Climatic factors were more influential than soil factors. The minimum temperature of the coldest month, mean temperature of the coldest quarter and annual precipitation were the most significant contributors to the habitat suitability distribution. In the cultivated area of oil tea Camellia, soil fertility was poor, organic matter was the most significant factor for the soil conditions. Based on climatic and soil factor analyses, our data suggest there is a great potential to spread the oil tea Camellia cultivation industry.
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