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Pei J, Guan Y, Xiao W, Ge J, Feng L, Yang H. The comparison of gut microbiota between wild and captive Asian badgers (Meles leucurus) under different seasons. Sci Rep 2024; 14:18199. [PMID: 39107422 PMCID: PMC11303745 DOI: 10.1038/s41598-024-69277-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2024] [Accepted: 08/02/2024] [Indexed: 08/10/2024] Open
Abstract
The gut microbiota plays an important role in the immunology, physiology and growth and development of animals. However, currently, there is a lack of available sequencing data on the gut microbiota of Asian badgers. Studying the gut microbiota of Asian badgers could provide fundamental data for enhancing productivity and immunity of badgers' breeding, as well as for the protection of wild animals. In this study, we first characterized the composition and structure of the gut microbiota in the large intestines of wild and captive Asian badgers during summer and winter by sequencing the V3-V4 region of the 16S ribosomal RNA gene. A total of 9 dominant phyla and 12 genera among the bacterial communities of the large intestines exhibited significant differences. Our results showed that Firmicutes and Proteobacteria were the most predominant in both wild and captive badgers, regardless of the season. Romboutsia, Streptococcus and Enterococcus may represent potential sources of zoonoses, warranting further attention and study. Our findings indicated that the diversity and availability of food resources were the most important influencing factors on the gut microbiota of Asian badgers, providing fundamental data for the protection and conservation of wild animals. Variation in the gut microbiota due to season, age and sex in both wild and captive Asian badgers should be considered in future research directions. Furthermore, combined multi-omics studies could provide more information for wild animal conservation, and enhancing our understanding of the molecular mechanism between the microbiota and host.
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Affiliation(s)
- Jianchi Pei
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Forestry and Grassland Administration Key Laboratory for Northeast Tiger and Leopard National Park Conservation Ecology, Northeast Tiger and Leopard Biodiversity National Observation and Research Station, National Forestry and Grassland Administration Amur Tiger and Amur Leopard Monitoring and Research Center, College of Life Sciences, Beijing Normal University, Beijing, 100875, China
| | - Yu Guan
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Forestry and Grassland Administration Key Laboratory for Northeast Tiger and Leopard National Park Conservation Ecology, Northeast Tiger and Leopard Biodiversity National Observation and Research Station, National Forestry and Grassland Administration Amur Tiger and Amur Leopard Monitoring and Research Center, College of Life Sciences, Beijing Normal University, Beijing, 100875, China.
| | - Wenhong Xiao
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beijing, 100101, China
| | - Jianping Ge
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Forestry and Grassland Administration Key Laboratory for Northeast Tiger and Leopard National Park Conservation Ecology, Northeast Tiger and Leopard Biodiversity National Observation and Research Station, National Forestry and Grassland Administration Amur Tiger and Amur Leopard Monitoring and Research Center, College of Life Sciences, Beijing Normal University, Beijing, 100875, China
| | - Limin Feng
- Ministry of Education Key Laboratory for Biodiversity Science and Ecological Engineering, National Forestry and Grassland Administration Key Laboratory for Northeast Tiger and Leopard National Park Conservation Ecology, Northeast Tiger and Leopard Biodiversity National Observation and Research Station, National Forestry and Grassland Administration Amur Tiger and Amur Leopard Monitoring and Research Center, College of Life Sciences, Beijing Normal University, Beijing, 100875, China
| | - Haitao Yang
- Institute of Remote Sensing and Geographic Information System, School of Earth and Space Sciences, Peking University, Beijing, 100871, China.
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Cooperative den maintenance between male Japanese badgers that are delayed dispersers and their mothers. J ETHOL 2021. [DOI: 10.1007/s10164-021-00718-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
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François L. Long-term monitoring of activities of badgers (Meles meles L.) in a broadleaved forest in France. EUR J WILDLIFE RES 2021. [DOI: 10.1007/s10344-020-01447-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Symes SA, Klafki R, Packham R, Larsen KW. Winter activity patterns of the North American badger (Taxidea taxus) at its northwestern periphery. J Mammal 2019. [DOI: 10.1093/jmammal/gyz171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Abstract
The North American badger (Taxidea taxus) is a nonhibernating carnivore that occurs in areas with highly seasonal climates, such as in Canada where the animal reaches its northern limits. There, winter climate is harsh and conventional habitat is limited and patchy, possibly leading to additional energetic constraints. Using radiotelemetry and remote cameras, we documented winter activities of 16 badgers (12 females, 4 males) between 2007 and 2011 in British Columbia, at the northwestern periphery of the species’ range. In comparison to their summer ecology, the animals reduced home range sizes by up to 98% and showed fidelity to particular burrows. Burrow fidelity was variable (mean 27 days; range 0–108) and coincided with reduction in body temperatures, suggesting the onset of torpor. Despite lengthy use of the same burrow, badgers emerged frequently and conducted excursions that appeared to represent foraging behavior. Burrow emergence was not related to ambient temperature or snow depth; rather, it was best explained by the amount of days elapsed since the start of winter. Despite these trends, winter activity also was variable among individual badgers. It may be that limited fat reserves and higher energetic costs in northwestern ranges require winter foraging activities.
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Affiliation(s)
- Stephen A Symes
- Environmental Science Program, Thompson Rivers University, Kamloops, BC, Canada
| | - Richard Klafki
- Environmental Science Program, Thompson Rivers University, Kamloops, BC, Canada
| | - Roger Packham
- Ministry of Forests, Lands, and Natural Resource Operations (Retired), BC, Canada
| | - Karl W Larsen
- Department of Natural Resource Sciences, Thompson Rivers University, Kamloops, BC, Canada
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Barbour K, McClune DW, Delahay RJ, Speakman JR, McGowan NE, Kostka B, Montgomery WI, Marks NJ, Scantlebury DM. No energetic cost of tuberculosis infection in European badgers (Meles meles). J Anim Ecol 2019; 88:1973-1985. [DOI: 10.1111/1365-2656.13092] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/20/2019] [Accepted: 05/31/2019] [Indexed: 11/29/2022]
Affiliation(s)
- Katie Barbour
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - David W. McClune
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - Richard J. Delahay
- National Wildlife Management Centre Animal and Plant Health Agency York UK
| | - John R. Speakman
- Institute of Biological and Environmental Sciences University of Aberdeen Aberdeen UK
- State Key Laboratory of Molecular Developmental Biology Institute of Genetics and Developmental Biology Chinese Academy of Sciences Beijing China
| | - Natasha E. McGowan
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - Berit Kostka
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - W. Ian Montgomery
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - Nikki J. Marks
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
| | - David M. Scantlebury
- School of Biological Sciences Institute for Global Food Security Queen’s University Belfast UK
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Regulation of blood oxygen transport in hibernating mammals. J Comp Physiol B 2017; 187:847-856. [DOI: 10.1007/s00360-017-1085-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2016] [Revised: 12/19/2016] [Accepted: 03/07/2017] [Indexed: 12/23/2022]
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7
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Flexibility in metabolic rate and activity level determines individual variation in overwinter performance. Oecologia 2016; 182:703-12. [PMID: 27461377 PMCID: PMC5043002 DOI: 10.1007/s00442-016-3697-z] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2016] [Accepted: 07/17/2016] [Indexed: 11/10/2022]
Abstract
Energy stores are essential for the overwinter survival of many temperate and polar animals, but individuals within a species often differ in how quickly they deplete their reserves. These disparities in overwinter performance may be explained by differences in their physiological and behavioral flexibility in response to food scarcity. However, little is known about whether individuals exhibit correlated or independent changes in these traits, and how these phenotypic changes collectively affect their winter energy use. We examined individual flexibility in both standard metabolic rate and activity level in response to food scarcity and their combined consequences for depletion of lipid stores among overwintering brown trout (Salmo trutta). Metabolism and activity tended to decrease, yet individuals exhibited striking differences in their physiological and behavioral flexibility. The rate of lipid depletion was negatively related to decreases in both metabolic and activity rates, with the smallest lipid loss over the simulated winter period occurring in individuals that had the greatest reductions in metabolism and/or activity. However, changes in metabolism and activity were negatively correlated; those individuals that decreased their SMR to a greater extent tended to increase their activity rates, and vice versa, suggesting among-individual variation in strategies for coping with food scarcity.
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McClune DW, Kostka B, Delahay RJ, Montgomery WI, Marks NJ, Scantlebury DM. Winter Is Coming: Seasonal Variation in Resting Metabolic Rate of the European Badger (Meles meles). PLoS One 2015; 10:e0135920. [PMID: 26352150 PMCID: PMC4564200 DOI: 10.1371/journal.pone.0135920] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2014] [Accepted: 07/28/2015] [Indexed: 11/30/2022] Open
Abstract
Resting metabolic rate (RMR) is a measure of the minimum energy requirements of an animal at rest, and can give an indication of the costs of somatic maintenance. We measured RMR of free-ranging European badgers (Meles meles) to determine whether differences were related to sex, age and season. Badgers were captured in live-traps and placed individually within a metabolic chamber maintained at 20 ± 1°C. Resting metabolic rate was determined using an open-circuit respirometry system. Season was significantly correlated with RMR, but no effects of age or sex were detected. Summer RMR values were significantly higher than winter values (mass-adjusted mean ± standard error: 2366 ± 70 kJ⋅d−1; 1845 ± 109 kJ⋅d−1, respectively), with the percentage difference being 24.7%. While under the influence of anaesthesia, RMR was estimated to be 25.5% lower than the combined average value before administration, and after recovery from anaesthesia. Resting metabolic rate during the autumn and winter was not significantly different to allometric predictions of basal metabolic rate for mustelid species weighing 1 kg or greater, but badgers measured in the summer had values that were higher than predicted. Results suggest that a seasonal reduction in RMR coincides with apparent reductions in physical activity and body temperature as part of the overwintering strategy (‘winter lethargy’) in badgers. This study contributes to an expanding dataset on the ecophysiology of medium-sized carnivores, and emphasises the importance of considering season when making predictions of metabolic rate.
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Affiliation(s)
- David W. McClune
- School of Biological Sciences, Institute for Global Food Security, Queen’s University Belfast, Belfast, United Kingdom
| | - Berit Kostka
- School of Biological Sciences, Institute for Global Food Security, Queen’s University Belfast, Belfast, United Kingdom
| | - Richard J. Delahay
- National Wildlife Management Centre, Animal and Plant Health Agency, Woodchester Park, Gloucestershire GL10 3UJ, United Kingdom
| | - W. Ian Montgomery
- School of Biological Sciences, Institute for Global Food Security, Queen’s University Belfast, Belfast, United Kingdom
| | - Nikki J. Marks
- School of Biological Sciences, Institute for Global Food Security, Queen’s University Belfast, Belfast, United Kingdom
- * E-mail: (NJM); (DMS)
| | - David M. Scantlebury
- School of Biological Sciences, Institute for Global Food Security, Queen’s University Belfast, Belfast, United Kingdom
- * E-mail: (NJM); (DMS)
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Affiliation(s)
- Julia Nowack
- Department of Animal Ecology and Conservation; Biocentre Grindel; University of Hamburg; Martin-Luther-King Platz 3 20146 Hamburg Germany
- Centre for Behavioural and Physiological Ecology, Zoology; University of New England; Armidale NSW 2351 Australia
| | - Kathrin H. Dausmann
- Department of Animal Ecology and Conservation; Biocentre Grindel; University of Hamburg; Martin-Luther-King Platz 3 20146 Hamburg Germany
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Seki Y, Okuda K, Koganezawa M. Indirect Effects of Sika Deer on Japanese Badgers. MAMMAL STUDY 2014. [DOI: 10.3106/041.039.0403] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
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Mustonen AM, Lempiäinen T, Aspelund M, Hellstedt P, Ikonen K, Itämies J, Vähä V, Erkinaro J, Asikainen J, Kunnasranta M, Niemelä P, Aho J, Nieminen P. Application of change-point analysis to determine winter sleep patterns of the raccoon dog (Nyctereutes procyonoides) from body temperature recordings and a multi-faceted dietary and behavioral study of wintering. BMC Ecol 2012; 12:27. [PMID: 23237274 PMCID: PMC3549453 DOI: 10.1186/1472-6785-12-27] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2012] [Accepted: 12/06/2012] [Indexed: 01/23/2023] Open
Abstract
BACKGROUND A multi-faceted approach was used to investigate the wintertime ecophysiology and behavioral patterns of the raccoon dog, Nyctereutes procyonoides, a suitable model for winter sleep studies. By utilizing GPS tracking, activity sensors, body temperature (Tb) recordings, change-point analysis (CPA), home range, habitat and dietary analyses, as well as fatty acid signatures (FAS), the impact of the species on wintertime food webs was assessed. The timing of passive bouts was determined with multiple methods and compared to Tb data analyzed by CPA. RESULTS Raccoon dogs displayed wintertime mobility, and the home range sizes determined by GPS were similar or larger than previous estimates by radio tracking. The preferred habitats were gardens, shores, deciduous forests, and sparsely forested areas. Fields had close to neutral preference; roads and railroads were utilized as travel routes. Raccoon dogs participated actively in the food web and gained benefit from human activity. Mammals, plants, birds, and discarded fish comprised the most important dietary classes, and the consumption of fish could be detected in FAS. Ambient temperature was an important external factor influencing Tb and activity. The timing of passive periods approximated by behavioral data and by CPA shared 91% similarity. CONCLUSIONS Passive periods can be determined with CPA from Tb recordings without the previously used time-consuming and expensive methods. It would be possible to recruit more animals by using the simple methods of data loggers and ear tags. Hunting could be used as a tool to return the ear-tagged individuals allowing the economical extension of follow-up studies. The Tb and CPA methods could be applied to other northern carnivores.
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Affiliation(s)
- Anne-Mari Mustonen
- Institute of Biomedicine/Anatomy, School of Medicine, Faculty of Health Sciences, University of Eastern Finland, P,O, Box 1627, FI-70211, Kuopio, Finland.
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Villegas-Amtmann S, Atkinson S, Paras-Garcia A, Costa DP. Seasonal variation in blood and muscle oxygen stores attributed to diving behavior, environmental temperature and pregnancy in a marine predator, the California sea lion. Comp Biochem Physiol A Mol Integr Physiol 2012; 162:413-20. [DOI: 10.1016/j.cbpa.2012.04.019] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2012] [Revised: 04/17/2012] [Accepted: 04/22/2012] [Indexed: 10/28/2022]
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Villegas-Amtmann S, Simmons SE, Kuhn CE, Huckstadt LA, Costa DP. Latitudinal range influences the seasonal variation in the foraging behavior of marine top predators. PLoS One 2011; 6:e23166. [PMID: 21853081 PMCID: PMC3154271 DOI: 10.1371/journal.pone.0023166] [Citation(s) in RCA: 32] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/08/2011] [Accepted: 07/13/2011] [Indexed: 11/29/2022] Open
Abstract
Non-migratory resident species should be capable of modifying their foraging behavior to accommodate changes in prey abundance and availability associated with a changing environment. Populations that are better adapted to change will have higher foraging success and greater potential for survival in the face of climate change. We studied two species of resident central place foragers from temperate and equatorial regions with differing population trends and prey availability associated to season, the California sea lion (Zalophus californianus) (CSL) whose population is increasing and the endangered Galapagos sea lion (Zalophus wollebaeki) (GSL) whose population is declining. To determine their response to environmental change, we studied and compared their diving behavior using time-depth recorders and satellite location tags and their diet by measuring C and N isotope ratios during a warm and a cold season. Based on latitudinal differences in oceanographic productivity, we hypothesized that the seasonal variation in foraging behavior would differ for these two species. CSL exhibited greater seasonal variability in their foraging behavior as seen in changes to their diving behavior, foraging areas and diet between seasons. Conversely, GSL did not change their diving behavior between seasons, presenting three foraging strategies (shallow, deep and bottom divers) during both. GSL exhibited greater dive and foraging effort than CSL. We suggest that during the warm and less productive season a greater range of foraging behaviors in CSL was associated with greater competition for prey, which relaxed during the cold season when resource availability was greater. GSL foraging specialization suggests that resources are limited throughout the year due to lower primary production and lower seasonal variation in productivity compared to CSL. These latitudinal differences influence their foraging success, pup survival and population growth reflected in contrasting population trends in which CSL are more successful and potentially more resilient to climate change.
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Affiliation(s)
- Stella Villegas-Amtmann
- Department of Ecology and Evolutionary Biology, University of California Santa Cruz, Santa Cruz, California, United States of America.
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Kitao N, Fukui D, Hashimoto M, Osborne PG. Overwintering strategy of wild free-ranging and enclosure-housed Japanese raccoon dogs (Nyctereutes procyonoides albus). INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2009; 53:159-165. [PMID: 19101736 DOI: 10.1007/s00484-008-0199-7] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/10/2008] [Revised: 11/09/2008] [Accepted: 11/11/2008] [Indexed: 05/27/2023]
Abstract
The raccoon dog, Nyctereutes procyonoides, is a canid with a passive overwintering strategy in northern Europe. However, the behaviour and physiology of the Japanese subspecies, N. p. albus, which has fewer chromosomes than the other subspecies, remain unknown. We measured body temperature, body composition and blood biochemistry of wild free-ranging and fasted enclosure-housed N. p. albus during boreal winter in Hokkaido, Japan. Body temperature of N. p. albus decreased from 38 degrees C in autumn to 35.9-36.7 degrees C while maintaining a circadian rhythm in late February (n = 3). A transient 18-36% decrease in resting heart rate occurred when body temperature was low (n = 2). Despite a 33-45% decrease in body weight due to winter fasting, circulating glucose, total protein and triglyceride levels were maintained (n = 4). Serum urea nitrogen dropped by 43-45% from autumn to spring, suggesting protein conservation during fasting. The overwintering survival strategy of N. p. albus in central Hokkaido is based upon large changes in seasonal activity patterns, winter denning and communal housing without the large decrease in body temperature that is characteristic of subarctic animals exhibiting hibernation or torpor.
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Affiliation(s)
- Naoya Kitao
- Department of Physiology, Asahikawa Medical College, Midorigaoka-higashi, Hokkaido, Japan.
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