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Differential Response of Soil Microbial Community Structure in Coal Mining Areas during Different Ecological Restoration Processes. Processes (Basel) 2022. [DOI: 10.3390/pr10102013] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022] Open
Abstract
Micro-organisms play important roles in promoting soil ecosystem restoration, but much of the current research has been limited to changes in microbial community structure in general, and little is known regarding the more sensitive and indicative microbial structures or the responses of microbial diversity to environmental change. In this study, based on high-throughput sequencing and molecular ecological network analyses, the structural characteristics of bacterial communities were investigated in response to four different ecological restoration modes in a coal mining subsidence area located in northwest China. The results showed that among soil nutrients, nitrate-nitrogen and fast-acting potassium were the most strongly associated with microbial community structure under different ecological restoration types. Proteobacteria, Actinobacteria, and Acidobacteria were identified as important phyla regarding network connectivity and structural composition. The central natural recovery zone was found to have the smallest network size and low complexity, but high modularity and good microbial community stability. Contrastingly, a highly complex molecular ecological network of soils in the photovoltaic economic zone existed beneath the photovoltaic modules, although no key species, strong bacterial competition, poor resistance to disturbance, and a significant increase in the relative abundance of Gemmatimonadetes were found. Furthermore, the reclamation zone had the highest soil nutrient content, the most complex network structure, and the most key and indicator species; however, the ecological network was less stable and readily disturbed.
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Zhang Q, Wei P, Banda JF, Ma L, Mao W, Li H, Hao C, Dong H. Succession of Microbial Communities in Waste Soils of an Iron Mine in Eastern China. Microorganisms 2021; 9:2463. [PMID: 34946065 PMCID: PMC8704403 DOI: 10.3390/microorganisms9122463] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Revised: 11/09/2021] [Accepted: 11/27/2021] [Indexed: 11/16/2022] Open
Abstract
The reclamation of mine dump is largely centered on the role played by microorganisms. However, the succession of microbial community structure and function in ecological restoration of the mine soils is still poorly understood. In this study, soil samples with different stacking time were collected from the dump of an iron mine in China and the physicochemical characteristics and microbial communities of these samples were comparatively investigated. The results showed that the fresh bare samples had the lowest pH, highest ion concentration, and were the most deficient in nutrients while the acidity and ion concentration of old bare samples decreased significantly, and the nutritional conditions improved remarkably. Vegetated samples had the weakest acidity, lowest ion concentration, and the highest nutrient concentration. In the fresh mine soils, the iron/sulfur-oxidizers such as Acidiferrobacter and Sulfobacillus were dominant, resulting in the strongest acidity. Bacteria from genera Acidibacter, Metallibacterium, and phyla Cyanobacteria, WPS-2 were abundant in the old bare samples, which contributed to the pH increase and TOC accumulation respectively. Acidobacteriota predominated in the vegetated samples and promoted nutrient enrichment and plant growth significantly. The microbial diversity and evenness of the three types of soils increased gradually, with more complex microbial networks, suggesting that the microbial community became more mature with time and microorganisms co-evolved with the mine soils.
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Affiliation(s)
- Qin Zhang
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Pengfei Wei
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Joseph Frazer Banda
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Linqiang Ma
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Weiao Mao
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Hongyi Li
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Chunbo Hao
- School of Water Resources and Environment, China University of Geosciences, Beijing 100083, China; (Q.Z.); (P.W.); (J.F.B.); (L.M.); (W.M.); (H.L.)
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
| | - Hailiang Dong
- Geomicrobiology Laboratory, State Key Laboratory of Biogeology and Environmental Geology, China University of Geosciences, Beijing 100083, China;
- Department of Geology and Environmental Earth Science, Miami University, Oxford, OH 45056, USA
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Biogeochemical Controls on the Potential for Long-Term Contaminant Leaching from Soils Developing on Historic Coal Mine Spoil. SOIL SYSTEMS 2020. [DOI: 10.3390/soilsystems5010003] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Coal mine spoil is widespread in US coal mining regions, and the potential long-term leaching of toxic metal(loid)s is a significant and underappreciated issue. This study aimed to determine the flux of contaminants from historic mine coal spoil at a field site located in Appalachian Ohio (USA) and link pore water composition and solid-phase composition to the weathering reaction stages within the soils. The overall mineralogical and microbial community composition indicates that despite very different soil formation pathways, soils developing on historic coal mine spoil and an undisturbed soil are currently dominated by similar mineral weathering reactions. Both soils contained pyrite coated with clays and secondary oxide minerals. However, mine spoil soil contained abundant residual coal, with abundant Fe- and Mn- (oxy)hydroxides. These secondary phases likely control and mitigate trace metal (Cu, Ni, and Zn) transport from the soils. While Mn was highly mobile in Mn-enriched soils, Fe and Al mobility may be more controlled by dissolved organic carbon dynamics than mineral abundance. There is also likely an underappreciated risk of Mn transport from coal mine spoil, and that mine spoil soils could become a major source of metals if local biogeochemical conditions change.
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Farrell HL, Barberán A, Danielson RE, Fehmi JS, Gornish ES. Disturbance is more important than seeding or grazing in determining soil microbial communities in a semiarid grassland. Restor Ecol 2020. [DOI: 10.1111/rec.13156] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/26/2022]
Affiliation(s)
- Hannah L. Farrell
- School of Natural Resources and the Environment University of Arizona PO Box 210137 Tucson AZ 85721 U.S.A
| | - Albert Barberán
- Department of Environmental Science University of Arizona PO Box 210038 Tucson AZ 85721 U.S.A
| | - Rachel E. Danielson
- Department of Land, Air and Water Resources University of California Davis CA U.S.A
| | - Jeffrey S. Fehmi
- School of Natural Resources and the Environment University of Arizona PO Box 210137 Tucson AZ 85721 U.S.A
| | - Elise S. Gornish
- School of Natural Resources and the Environment University of Arizona PO Box 210137 Tucson AZ 85721 U.S.A
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Adaptive Development of Soil Bacterial Communities to Ecological Processes Caused by Mining Activities in the Loess Plateau, China. Microorganisms 2020; 8:microorganisms8040477. [PMID: 32230763 PMCID: PMC7232194 DOI: 10.3390/microorganisms8040477] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 03/25/2020] [Accepted: 03/26/2020] [Indexed: 11/16/2022] Open
Abstract
Microorganisms are the driving force behind the circulation and transformation of the soil substance. The development of soil bacterial communities is critical for ecosystem restoration and evolution. In the Loess Plateau, coal mining activities have aggravated the deterioration of the fragile local ecological environment. The adaptive development of soil bacterial communities in response to different ecological processes caused by coal mining activities was explored through high-throughput sequencing technology and an ecological network analysis of the mining subsidence area of the Daliuta Coal Mine and vegetation rehabilitation area of the Heidaigou Coal Mine in the Loess Plateau. The results showed that while mining subsidence was inhibited, vegetation rehabilitation promoted the soil physicochemical properties. Soil organic matter, available phosphorus and available potassium in the subsidence area decreased significantly (P < 0.05), while soil organic matter, soil water, pH and EC in the vegetation rehabilitation area increased significantly (P < 0.05). The diversity index in the subsidence area decreased by about 20%, while that in the vegetation rehabilitation area increased by 63%. Mining subsidence and vegetation rehabilitation had a distinct influence on the molecular ecological networks of the soil bacteria, which tended to be more complex after the mining subsidence, and the number of connections in the network increased otherwise significantly enhanced interactive relationships. After the vegetation rehabilitation, the number of modules in the ecological network increased, but the contents of modules tended to be simpler. Soil bacterial communities adapted to the changes by changing the relationships between bacteria in response to different ecological processes. This study provides new insights into the monitoring and abatement of the damaged ecological environment in mines.
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