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Cheng XD, Zhang Z, Dai XX, Li YP. Retention behavior of nucleosides and nucleobases on a 3 μm undecylenic acid-functionalized silica column in per aqueous liquid chromatography and hydrophilic interaction liquid chromatography separation modes. J Chromatogr A 2024; 1721:464833. [PMID: 38555828 DOI: 10.1016/j.chroma.2024.464833] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2024] [Revised: 03/20/2024] [Accepted: 03/21/2024] [Indexed: 04/02/2024]
Abstract
A 3 μm undecylenic acid-functionalized stationary phase (UAS) was prepared for the separation of nucleosides and nucleobases using per aqueous liquid chromatography (PALC) and hydrophilic interaction liquid chromatography (HILIC). The retention behaviors of nucleosides and nucleobases in PALC and HILIC modes were explored by adjusting parameters such as water content, buffer concentration, pH of the mobile phase and column temperature. The experimental data and separation chromatogram demonstrated that PALC could provide retention comparable to that of HILIC for nucleosides and nucleobases. Comparative studies using diluted adenosine solutions evaluated theoretical plates and peak shape for the same retention factors (between 0.25 and 5.0) in PALC and HILIC. There was no buffer component in the mobile phases used to operate the comparisons. HILIC mode is more efficient for adenosine than PALC mode at low retention factors. It's the exact opposite phenomenon for high retention factors. It is proposed that the mass transfer of adenosine between the UAS, the water-rich layer and the ACN-rich mobile phase in HILIC is relatively slow. Given the significant use of toxic ACN in HILIC, PALC emerges as a safer and more effective alternative for separating nucleosides and nucleobases.
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Affiliation(s)
- Xiao-Dong Cheng
- School of Chemistry and Chemical Engineering, Qiannan Normal University for Nationalities, Duyun 558000, China.
| | - Zheng Zhang
- Wuhan Prevention and Treatment Center for Occupational Diseases, Wuhan 430015, China; Department of Biochemistry, Purdue University, West Lafayette, IN, USA
| | - Xue-Xin Dai
- School of Chemistry and Chemical Engineering, Qiannan Normal University for Nationalities, Duyun 558000, China
| | - Yun-Ping Li
- School of Chemistry and Chemical Engineering, Qiannan Normal University for Nationalities, Duyun 558000, China
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Cheng XD, Zhang Z, Li YP. A facile approach to undecylenic acid-functionalized stationary phases for per aqueous liquid chromatography. Anal Chim Acta 2023; 1265:341337. [PMID: 37230580 DOI: 10.1016/j.aca.2023.341337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2023] [Accepted: 05/08/2023] [Indexed: 05/27/2023]
Abstract
Green chromatography techniques using low-toxic mobile phase are getting increasingly attention in recent years. The core is developing stationary phases that possess adequate retention and separation under the mobile phase of high content water. Using thiol-ene click chemistry, an undecylenic acid-bonded silica stationary phase (UAS) was prepared in a facile manner. Elemental analysis (EA), solid-state 13C NMR spectroscopy and Fourier transform infrared spectrometry (FT-IR) confirmed the successful preparation of UAS. The synthesized UAS was employed for per aqueous liquid chromatography (PALC), which uses little organic solvent during separation. Due to the hydrophilic carboxy, thioether group and hydrophobic alkyl chains of the UAS, various categories of compounds (including nucleobases, nucleosides, organic acids and basic compounds) with different properties can achieve enhanced separation under the mobile phase of high content water compared with commercial C18 and silica stationary phases. Overall, our present UAS stationary phase shows excellent separation ability toward highly polar compounds and meets the requirements of green chromatography.
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Affiliation(s)
- Xiao-Dong Cheng
- School of Chemistry and Chemical Engineering, Qiannan Normal University for Nationalities, Duyun, 558000, China.
| | - Zheng Zhang
- Wuhan Prevention and Treatment Center for Occupational Diseases, Wuhan, 430015, China; Department of Biochemistry, Purdue University, West Lafayette, IN, USA
| | - Yun-Ping Li
- School of Chemistry and Chemical Engineering, Qiannan Normal University for Nationalities, Duyun, 558000, China
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Wang X, Cui J, Zhou J, Wang S, Gu Y, Liu X, Wang S. Preparation of polyacrylamide hydrophilic stationary phases with adjustable performance. J Chromatogr A 2023; 1702:464065. [PMID: 37224587 DOI: 10.1016/j.chroma.2023.464065] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 05/09/2023] [Accepted: 05/10/2023] [Indexed: 05/26/2023]
Abstract
Polymer modified silica materials are widely used as stationary phases in hydrophilic interaction liquid chromatography (HILIC), whereas a stationary phase with excellent performance is highly desired. In this study, vinyl modified silica was first synthesized through a silane coupling reaction, and then a polyacrylamide modified silica (PAM-SIL) stationary phase was successfully prepared using acrylamide as a copolymer monomer via free radical polymerization. The retention behaviors of polar analytes on the stationary phase under various chromatographic conditions, including acetonitrile content, buffer concentration and pH values were investigated, and a typical hydrophilic interaction retention mechanism was inferred. Exceptionally, the separation performance of the stationary phases could be regulated by controlling the polymer structure. Model analytes separated rapidly on the stationary phase which has an optimal grafting amount of vinyl, with the highest number of theoretical plates of orotic acid reaching 119,966/m. While the stationary phases with high acrylamide concentrations exhibited enhanced retention behavior and higher resolution for analytes. The adjustable separation performance will have huge potential in future separation and analysis applications.
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Affiliation(s)
- Xiaoqing Wang
- University of Science and Technology of China, Hefei 230026, China; Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Jian Cui
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Jin Zhou
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Shuo Wang
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Yiming Gu
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China
| | - Xiaowei Liu
- Advanced Membranes and Porous Materials Centre, Division of Physical Science and Engineering, King Abdullah University of Science and Technology, Thuwal 23955-6900, Kingdom of Saudi Arabia
| | - Shudong Wang
- Dalian National Laboratory for Clean Energy, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.
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A Compendium of the Principal Stationary Phases Used in Hydrophilic Interaction Chromatography: Where Have We Arrived? SEPARATIONS 2022. [DOI: 10.3390/separations10010022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Hydrophilic interaction liquid chromatography (HILIC) today is a well-known and largely applied technique to analyse polar compounds such as pharmaceuticals, metabolites, proteins, peptides, amino acids, oligonucleotides, and carbohydrates. Due to the large number of stationary phases employed for HILIC applications, this review aims to help the reader in choosing a proper stationary phase, which often represents the critical point for the success of a separation. A great offer is present for achiral applications in contrast to the chiral phases developed for HILIC enantioseparations. In the last case, up-to-date solutions are presented.
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Guo Y. A Survey of Polar Stationary Phases for Hydrophilic Interaction Chromatography and Recent Progress in Understanding Retention and Selectivity. Biomed Chromatogr 2022; 36:e5332. [PMID: 35001408 DOI: 10.1002/bmc.5332] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2021] [Revised: 12/08/2021] [Accepted: 12/13/2021] [Indexed: 11/10/2022]
Abstract
Various polar stationary phases have become available for hydrophilic interaction chromatography (HILIC) and help drive continuous applications in biomedical, environmental and pharmaceutical areas in the past decade. Although the stationary phases for HILIC have been reviewed previously, it is an appropriate time to take another look at the progresses during the past five years. The current review provides an overview of the polar stationary phases commercially available for HILIC applications in an effort to assist scientists in selecting suitable columns. New types of stationary phase that were published in literature in the past five years are summarized and discussed. The trend in stationary phase research and development is also highlighted. Of particular interest is the experimental evidence for direct interactions of polar analytes with the ligands of the stationary phases under HILIC conditions. In addition, two different approaches have been developed to delineate the relative significance of the partitioning and adsorption mechanisms in HILIC, representing an important advancement in our understanding of the retention mechanisms in HILIC.
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Affiliation(s)
- Yong Guo
- School of Pharmacy and Health Sciences, Fairleigh Dickinson University, New Jersey, USA
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SHANG S, DONG H, LI Y, ZHANG W, LI H, QIN W, QIAN X. [Large-scale enrichment and identification of human urinary N-glycoproteins/ N-glycopeptides]. Se Pu 2021; 39:686-694. [PMID: 34227365 PMCID: PMC9421575 DOI: 10.3724/sp.j.1123.2021.01039] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2021] [Indexed: 11/25/2022] Open
Abstract
N-Glycosylation of proteins, an important post-translational modification in eukaryotic cells, plays an essential role in the regulation of cell adhesion, migration, signal transduction, and apoptosis. Abnormal changes in protein glycosylation are closely related to the occurrence of many critical diseases, including diabetes, tumors, and neurological, kidney, and inflammatory diseases. A non-invasive type of liquid biopsy, urine sampling has the advantage of reducing the complexity of proteomic analysis. This facilitates the design of large-scale and continuous or multi-time point sampling strategies. However, the dynamic range of urinary protein abundance is relatively large, owing to individual differences and physiological conditions. Currently, there is a lack of specialized research on individual differences, physiological fluctuations, and physiological abundance ranges of urinary N-glycoproteins in large healthy populations. Therefore, it is difficult to accurately distinguish individual differences and normal physiological fluctuations from changes caused by disease; this poses a great challenge in disease marker research. Liquid chromatography-mass spectrometry (LC-MS) is an analytical technique widely used for the large-scale profiling of proteomes in biological systems, and the enrichment of N-glycopeptides is a prerequisite for their detection by MS.In this study, we established an approach based on hydrophilic interaction chromatography (HILIC) by optimizing the activation, cleaning, and elution processes of the enrichment method, for instance through the optimization of particle size and solvent composition, and investigated the identification number, selectivity, and stability of N-glycoprotein/N-glycopeptide enrichment under different experimental conditions. We found that N-glycoproteins and N-glycopeptides were highly enriched in a trifluoroacetic acid system with 5-μm filling particles in the HILIC column. On this basis, we analyzed the levels of N-glycoproteins/N-glycopeptides in urine samples. The consistency of N-glycoprotein/N-glycopeptide levels in urine samples taken from the same healthy person for five consecutive days was investigated by correlation analysis. This analysis revealed that the urinary N-glycoproteome of the same healthy person was relatively stable over a short period of time. Next, urinary samples from 20 healthy male volunteers and 20 healthy female volunteers were enriched for N-glycoproteins/N-glycopeptides, which were profiled by MS through qualitative and quantitative analyses. Screening and functional analysis of differential proteins were then carried out. A total of 1016 N-glycoproteins and 2192 N-glycopeptides were identified in the mid-morning urine samples of the 40 healthy volunteers. A label-free quantitation strategy was used to investigate the fluctuation range of the physiologically abundant urinary N-glycopeptides. The abundance of urinary N-glycopeptides spanned across approximately five orders of magnitude. Subsequently, gender differences in the N-glycosylation levels of urinary proteins were also explored in healthy people. Functional analysis of the N-glycoproteins that exhibited gender differences in abundance was performed. Based on multivariate statistical analysis, 206 differentially expressed proteins (p<0.05, fold change (FC)> 4) were identified. In females, we found 175 significantly down-regulated N-glycoproteins and 31 significantly up-regulated N-glycoproteins with respect to males. The expression levels of N-glycopeptides between the two groups suggested a clear gender difference. To investigate the biological processes and functions of these proteins, gene ontology (GO) analysis was performed on the N-glycoproteins/N-glycopeptides differentially expressed between males and females. Metabolic pathway analysis was also carried out based on the kyoto encyclopedia of genes and genomes (KEGG). Differentially expressed N-glycoproteins were mostly associated with platelet degranulation, extracellular region, and ossification. The top three relevant pathways were glycan biosynthesis and metabolism, metabolism of cofactors and vitamins, and lipid metabolism. Overall, sex may be an important factor for urinary N-glycoproteome differences among normal individuals and should be considered in clinical applications. This study provides relevant information regarding the function and mechanisms of the urinary glycoproteome and the screening of clinical biomarkers.
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Affiliation(s)
- Shiting SHANG
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Hangyan DONG
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Yuanyuan LI
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Wanjun ZHANG
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Hang LI
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Weijie QIN
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
| | - Xiaohong QIAN
- 军事科学院军事医学研究院生命组学研究所, 北京蛋白质组研究中心, 蛋白质组学国家重点实验室, 北京 102206
- Institute of Lifeomics, Academy of Military Medical Sciences, Academy of Military Sciences, Beijing Proteome Research Center, State Key Laboratory of Proteomics, Beijing 102206, China
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9
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Ozkan SA, Bakirhan NK. Pharmaceutical Analysis: Current Status and Future Perspectives. CURR PHARM ANAL 2021. [DOI: 10.2174/157341291703210108120504] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Sibel A. Ozkan
- Ankara University, Faculty of Pharmacy Department of Analytical Chemistry 06100, Tandogan, Ankara,Turkey
| | - Nurgul Karadas Bakirhan
- Department of Analytical Chemistry Gulhane Faculty of Pharmacy University of Health Science 06018, Ankara,Turkey
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