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Sattaratpaijit N, Thanawattano C, Leelasittikul K, Pugongchai A, Saiborisut N, Yuenyongchaiwat K, Tepwimonpetkun C, Saiphoklang N. Comparison of sleep position monitoring between NaTu sensor and video-validated polysomnography in patients with obstructive sleep apnea. Sleep Breath 2024; 28:1977-1985. [PMID: 38907950 DOI: 10.1007/s11325-024-03076-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2024] [Revised: 04/28/2024] [Accepted: 06/07/2024] [Indexed: 06/24/2024]
Abstract
PURPOSE This study aimed to evaluate the accuracy of a Bluetooth position monitor called NaTu sensor and its mobile phone application for detecting sleep position among patients with obstructive sleep apnea (OSA) during polysomnography (PSG). METHODS A cross-sectional study was conducted on adults with suspected of having OSA who underwent PSG. Sleep positions were recorded simultaneously using a video-validated PSG position sensor and the NaTu sensor. The area under the Receiver Operator Characteristic curve (ROC AUC), sensitivity, and specificity values were calculated to evaluate the validity of the NaTu sensor. RESULTS Ninety participants (56.7% male) were included, with median age of 40.0 years and body mass index of 29.4 kg/m2. The mean AHI was 58.4 ± 31.2 events/hour, categorizing the severity of OSA as mild (5.6%), moderate (18.9%), and severe (75.5%). Sleep positions (supine, lateral right, lateral left) identified by the NaTu sensor closely agreed with the video-validated PSG. The kappa statistic demonstrated almost perfect agreement (k = 0.95, P < 0.001) for overall position recording. The ROC AUC for identifying supine, lateral right, and lateral left positions ranged from 0.974 to 0.981, with sensitivity ranging from 95.1% to 99.1% and specificity from 96.5% to 99.6%. CONCLUSION Our wearable sensor monitoring significantly agrees with video-validated PSG in identifying sleep positions. This device is reliable and accurate for position monitoring and could be an alternative tool for monitoring positions in in-lab PSG, home sleep apnea testing, or tracking positional treatment at home. REGISTRATION Thaiclinicaltrials.org with number TCTR20210701008.
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Affiliation(s)
- Nithita Sattaratpaijit
- Department of Otolaryngology-Head and Neck Surgery, Faculty of Medicine, Thammasat University, Pathum Thani, Thailand
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand
| | - Chusak Thanawattano
- National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand
| | - Kanyada Leelasittikul
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand
- Medical Diagnostics Unit, Thammasat University Hospital, Pathum Thani, Thailand
| | - Apiwat Pugongchai
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand
- Medical Diagnostics Unit, Thammasat University Hospital, Pathum Thani, Thailand
| | - Nannaphat Saiborisut
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand
- Medical Diagnostics Unit, Thammasat University Hospital, Pathum Thani, Thailand
| | - Kornanong Yuenyongchaiwat
- Department of Physiotherapy, Faculty of Allied Health Sciences, Thammasat University, Pathum Thani, Thailand
| | - Chatkarin Tepwimonpetkun
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand
- Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Faculty of Medicine, Thammasat University, 99/209 Paholyotin Road, Klong Luang, Pathum Thani, 12120, Thailand
| | - Narongkorn Saiphoklang
- Sleep Center of Thammasat (SCENT), Thammasat University Hospital, Pathum Thani, Thailand.
- Medical Diagnostics Unit, Thammasat University Hospital, Pathum Thani, Thailand.
- Division of Pulmonary and Critical Care Medicine, Department of Internal Medicine, Faculty of Medicine, Thammasat University, 99/209 Paholyotin Road, Klong Luang, Pathum Thani, 12120, Thailand.
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Kember AJ, Zia H, Elangainesan P, Hsieh ME, Adijeh R, Li I, Ritchie L, Akbarian S, Taati B, Hobson SR, Dolatabadi E. Transitioning sleeping position detection in late pregnancy using computer vision from controlled to real-world settings: an observational study. Sci Rep 2024; 14:17380. [PMID: 39075133 PMCID: PMC11286875 DOI: 10.1038/s41598-024-68472-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/04/2023] [Accepted: 07/24/2024] [Indexed: 07/31/2024] Open
Abstract
Sleeping on the back after 28 weeks of pregnancy has recently been associated with giving birth to a small-for-gestational-age infant and late stillbirth, but whether a causal relationship exists is currently unknown and difficult to study prospectively. This study was conducted to build a computer vision model that can automatically detect sleeping position in pregnancy under real-world conditions. Real-world overnight video recordings were collected from an ongoing, Canada-wide, prospective, four-night, home sleep apnea study and controlled-setting video recordings were used from a previous study. Images were extracted from the videos and body positions were annotated. Five-fold cross validation was used to train, validate, and test a model using state-of-the-art deep convolutional neural networks. The dataset contained 39 pregnant participants, 13 bed partners, 12,930 images, and 47,001 annotations. The model was trained to detect pillows, twelve sleeping positions, and a sitting position in both the pregnant person and their bed partner simultaneously. The model significantly outperformed a previous similar model for the three most commonly occurring natural sleeping positions in pregnant and non-pregnant adults, with an 82-to-89% average probability of correctly detecting them and a 15-to-19% chance of failing to detect them when any one of them is present.
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Affiliation(s)
- Allan J Kember
- Department of Obstetrics and Gynaecology, University of Toronto, 123 Edward Street, Suite 1200, Toronto, ON, M5G 0A8, Canada.
- Institute of Health Policy, Management, and Evaluation, University of Toronto, 155 College Street, Suite 425, Toronto, ON, M5T 3M6, Canada.
| | - Hafsa Zia
- Temerty Faculty of Medicine, University of Toronto, Medical Sciences Building, 1 King's College Circle, Toronto, ON, M5S 1A8, Canada
| | - Praniya Elangainesan
- Temerty Faculty of Medicine, University of Toronto, Medical Sciences Building, 1 King's College Circle, Toronto, ON, M5S 1A8, Canada
| | - Min-En Hsieh
- Electrical Engineering and Computer Science, National Cheng Kung University, No.1, University Road, Tainan City, 701, Taiwan
| | - Ramak Adijeh
- Regulatory Affairs Program, Northeastern University, First Canadian Place, 100 King Street West, Suite 4620, Toronto, ON, M5X 1E2, Canada
| | - Ivan Li
- Department of Computer Science, University of Toronto, 40 St. George Street, Toronto, ON, M5S 2E4, Canada
| | - Leah Ritchie
- Department of Biological Sciences, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada
| | - Sina Akbarian
- Vector Institute, 661 University Avenue, Suite 710, Toronto, ON, M5G 1M1, Canada
| | - Babak Taati
- Department of Computer Science, University of Toronto, 40 St. George Street, Toronto, ON, M5S 2E4, Canada
- KITE Research Institute, Toronto Rehabilitation Institute, University Health Network, 550 University Avenue, #12-165, Toronto, ON, M5G 2A2, Canada
| | - Sebastian R Hobson
- Department of Obstetrics and Gynaecology, University of Toronto, 123 Edward Street, Suite 1200, Toronto, ON, M5G 0A8, Canada
- Maternal-Fetal Medicine Division, Department of Obstetrics and Gynaecology, Mount Sinai Hospital, 600 University Avenue, Toronto, ON, M5G 1X5, Canada
| | - Elham Dolatabadi
- Institute of Health Policy, Management, and Evaluation, University of Toronto, 155 College Street, Suite 425, Toronto, ON, M5T 3M6, Canada
- School of Health Policy and Management, York University Stong College, Room 314, 4700 Keele Street, Toronto, ON, M3J 1P3, Canada
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Espinosa MA, Ponce P, Molina A, Borja V, Torres MG, Rojas M. Advancements in Home-Based Devices for Detecting Obstructive Sleep Apnea: A Comprehensive Study. SENSORS (BASEL, SWITZERLAND) 2023; 23:9512. [PMID: 38067885 PMCID: PMC10708697 DOI: 10.3390/s23239512] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/09/2023] [Revised: 11/24/2023] [Accepted: 11/25/2023] [Indexed: 12/18/2023]
Abstract
Obstructive Sleep Apnea (OSA) is a respiratory disorder characterized by frequent breathing pauses during sleep. The apnea-hypopnea index is a measure used to assess the severity of sleep apnea and the hourly rate of respiratory events. Despite numerous commercial devices available for apnea diagnosis and early detection, accessibility remains challenging for the general population, leading to lengthy wait times in sleep clinics. Consequently, research on monitoring and predicting OSA has surged. This comprehensive paper reviews devices, emphasizing distinctions among representative apnea devices and technologies for home detection of OSA. The collected articles are analyzed to present a clear discussion. Each article is evaluated according to diagnostic elements, the implemented automation level, and the derived level of evidence and quality rating. The findings indicate that the critical variables for monitoring sleep behavior include oxygen saturation (oximetry), body position, respiratory effort, and respiratory flow. Also, the prevalent trend is the development of level IV devices, measuring one or two signals and supported by prediction software. Noteworthy methods showcasing optimal results involve neural networks, deep learning, and regression modeling, achieving an accuracy of approximately 99%.
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Affiliation(s)
- Miguel A. Espinosa
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Pedro Ponce
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Arturo Molina
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
| | - Vicente Borja
- Faculty of Engineering, Universidad Nacional Autonoma de Mexico, Mexico City 04510, Mexico;
| | - Martha G. Torres
- Sleep Medicine Unit, Instituto Nacional de Enfermedades Respiratorias Ismael Cosio Villegas, Mexico City 14080, Mexico;
| | - Mario Rojas
- Institute of Advanced Materials for Sustainable Manufacturing, Tecnologico de Monterrey, Mexico City 14380, Mexico; (M.A.E.); (M.R.)
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Kember AJ, Selvarajan R, Park E, Huang H, Zia H, Rahman F, Akbarian S, Taati B, Hobson SR, Dolatabadi E. Vision-based detection and quantification of maternal sleeping position in the third trimester of pregnancy in the home setting-Building the dataset and model. PLOS DIGITAL HEALTH 2023; 2:e0000353. [PMID: 37788239 PMCID: PMC10547173 DOI: 10.1371/journal.pdig.0000353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Accepted: 08/17/2023] [Indexed: 10/05/2023]
Abstract
In 2021, the National Guideline Alliance for the Royal College of Obstetricians and Gynaecologists reviewed the body of evidence, including two meta-analyses, implicating supine sleeping position as a risk factor for growth restriction and stillbirth. While they concluded that pregnant people should be advised to avoid going to sleep on their back after 28 weeks' gestation, their main critique of the evidence was that, to date, all studies were retrospective and sleeping position was not objectively measured. As such, the Alliance noted that it would not be possible to prospectively study the associations between sleeping position and adverse pregnancy outcomes. Our aim was to demonstrate the feasibility of building a vision-based model for automated and accurate detection and quantification of sleeping position throughout the third trimester-a model with the eventual goal to be developed further and used by researchers as a tool to enable them to either confirm or disprove the aforementioned associations. We completed a Canada-wide, cross-sectional study in 24 participants in the third trimester. Infrared videos of eleven simulated sleeping positions unique to pregnancy and a sitting position both with and without bed sheets covering the body were prospectively collected. We extracted 152,618 images from 48 videos, semi-randomly down-sampled and annotated 5,970 of them, and fed them into a deep learning algorithm, which trained and validated six models via six-fold cross-validation. The performance of the models was evaluated using an unseen testing set. The models detected the twelve positions, with and without bed sheets covering the body, achieving an average precision of 0.72 and 0.83, respectively, and an average recall ("sensitivity") of 0.67 and 0.76, respectively. For the supine class with and without bed sheets covering the body, the models achieved an average precision of 0.61 and 0.75, respectively, and an average recall of 0.74 and 0.81, respectively.
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Affiliation(s)
- Allan J. Kember
- Department of Obstetrics and Gynaecology, University of Toronto, Toronto, Canada
- Institute of Health Policy, Management, and Evaluation, University of Toronto, Toronto, Canada
- Shiphrah Biomedical Inc., Toronto, Canada
| | - Rahavi Selvarajan
- Department of Electrical and Computer Engineering, University of Toronto, Toronto, Canada
| | - Emma Park
- Shiphrah Biomedical Inc., Toronto, Canada
| | - Henry Huang
- Institute of Biomedical Engineering, University of Toronto, Toronto, Canada
| | - Hafsa Zia
- Temerty Faculty of Medicine, University of Toronto, Toronto, Canada
| | - Farhan Rahman
- Department of Electrical and Computer Engineering, University of Toronto, Toronto, Canada
| | | | - Babak Taati
- Institute of Biomedical Engineering, University of Toronto, Toronto, Canada
- Vector Institute, Toronto, Canada
- Department of Computer Science, University of Toronto, Toronto, Canada
| | - Sebastian R. Hobson
- Department of Obstetrics and Gynaecology, University of Toronto, Toronto, Canada
- Department of Obstetrics and Gynaecology, Maternal-Fetal Medicine Division, Mount Sinai Hospital, Toronto, Canada
| | - Elham Dolatabadi
- Institute of Health Policy, Management, and Evaluation, University of Toronto, Toronto, Canada
- Vector Institute, Toronto, Canada
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Wang Y, Chen C, Gu L, Zhai Y, Sun Y, Gao G, Xu Y, Pang L, Xu L. Effect of short-term mindfulness-based stress reduction on sleep quality in male patients with alcohol use disorder. Front Psychiatry 2023; 14:928940. [PMID: 36998624 PMCID: PMC10043304 DOI: 10.3389/fpsyt.2023.928940] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/26/2022] [Accepted: 02/17/2023] [Indexed: 03/15/2023] Open
Abstract
Background Sleep disturbance is one of the most prominent complaints of patients with alcohol use disorder (AUD), with more than 70% of patients with AUD reporting an inability to resolve sleep problems during abstinence. Mindfulness-based stress reduction (MBSR) has been shown to improve sleep quality and as an alternative therapy to hypnotics for sleep disorders. Objective The aim of the present study was to evaluate the effect of short-term MBSR on sleep quality in male patients with AUD after withdrawal. Methods A total of 91 male patients with AUD after 2 weeks of routine withdrawal therapy were randomly divided into two groups using a coin toss: the treatment group (n = 50) and the control group (n = 41). The control group was received supportive therapy, and the intervention group added with MBSR for 2 weeks on the basis of supportive therapy. Objective sleep quality was measured at baseline and 2 weeks after treatment using the cardiopulmonary coupling (CPC). Indicators related to sleep quality include total sleep time, stable sleep time, unstable sleep time, rapid eye movement (REM) sleep time, wake-up time, stable sleep latency, sleep efficiency, and apnea index. These indicators were compared by an analysis of covariance (ANCOVA) between the two groups, controlling for individual differences in the respective measures at baseline. Results The results showed that there were no significant differences in the age [t (89) = -0.541, P = 0.590), BMI [t (89) = -0.925, P = 0.357], educational status [t (89) = 1.802, P = 0.076], years of drinking [t (89) = -0.472, P = 0.638), daily intake [t (89) = 0.892, P = 0.376], types of alcohol [χ2 (1) = 0.071, P = 0.789], scores of CIWA-AR [t (89) = 0.595, P = 0.554], scores of SDS [t (89) = -1.151, P = 0.253), or scores of SAS [t (89) = -1.209, P = 0.230] between the two groups. Moreover, compared with the control group, the total sleep time [F (1.88) = 4.788, P = 0.031) and stable sleep time [F (1.88) = 6.975, P = 0.010] were significantly increased in the treatment group. Furthermore, the average apnea index in the patients who received MBSR was significantly decreased than in the control group [F (1.88) = 5.284, P = 0.024]. Conclusion These results suggest that short-term MBSR could improve sleep quality and may serve as an alternative treatment to hypnotics for sleep disturbance in patients with AUD after withdrawal.
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Affiliation(s)
- Yongmei Wang
- Department of Nursing, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Anhui Mental Health Center, Hefei, China
- Department of Nursing, Hefei Fourth People's Hospital, Hefei, China
| | - Cuiping Chen
- Department of Nursing, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Anhui Mental Health Center, Hefei, China
- Department of Nursing, Hefei Fourth People's Hospital, Hefei, China
| | - Lina Gu
- Anhui Mental Health Center, Hefei, China
- Department of Material Dependence, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Department of Material Dependence, Hefei Fourth People's Hospital, Hefei, China
| | - Yi Zhai
- Anhui Mental Health Center, Hefei, China
- Department of Material Dependence, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Department of Material Dependence, Hefei Fourth People's Hospital, Hefei, China
| | - Yanhong Sun
- Anhui Mental Health Center, Hefei, China
- Department of Pharmacy, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Department of Pharmacy, Hefei Fourth People's Hospital, Hefei, China
| | - Guoqing Gao
- Anhui Mental Health Center, Hefei, China
- Department of Material Dependence, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Department of Material Dependence, Hefei Fourth People's Hospital, Hefei, China
| | - Yayun Xu
- Department of Epidemiology and Biostatistics, School of Public Health, Anhui Medical University, Hefei, China
| | - Liangjun Pang
- Anhui Mental Health Center, Hefei, China
- Department of Material Dependence, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Department of Material Dependence, Hefei Fourth People's Hospital, Hefei, China
| | - Lianyin Xu
- Department of Nursing, Affiliated Psychological Hospital of Anhui Medical University, Hefei, China
- Anhui Mental Health Center, Hefei, China
- Department of Nursing, Hefei Fourth People's Hospital, Hefei, China
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Chan PY, Tay A, Chen D, De Freitas M, Millet C, Nguyen-Duc T, Duke G, Lyall J, Nguyen JT, McNeil J, Hopper I. Ambient intelligence-based monitoring of staff and patient activity in the intensive care unit. Aust Crit Care 2023; 36:92-98. [PMID: 36244918 DOI: 10.1016/j.aucc.2022.08.011] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 08/19/2022] [Accepted: 08/20/2022] [Indexed: 01/24/2023] Open
Abstract
BACKGROUND Caregiver workload in the ICU setting is difficult to numerically quantify. Ambient Intelligence utilises computer vision-guided neural networks to continuously monitor multiple datapoints in video feeds, has become increasingly efficient at automatically tracking various aspects of human movement. OBJECTIVES To assess the feasibility of using Ambient Intelligence to track and quantify allpatient and caregiver activity within a bedspace over the course of an ICU admission and also to establish patient specific factors, and environmental factors such as time ofday, that might contribute to an increased workload in ICU workers. METHODS 5000 images were manually annotated and then used to train You Only LookOnce (YOLOv4), an open-source computer vision algorithm. Comparison of patientmotion and caregiver activity was then performed between these patients. RESULTS The algorithm was deployed on 14 patients comprising 1762800 framesof new, untrained data. There was a strong correlation between the number ofcaregivers in the room and the standardized movement of the patient (p < 0.0001) withmore caregivers associated with more movement. There was a significant difference incaregiver activity throughout the day (p < 0.05), HDU vs. ICU status (p < 0.05), delirious vs. non delirious patients (p < 0.05), and intubated vs. not intubated patients(p < 0.05). Caregiver activity was lowest between 0400 and 0800 (average .71 ± .026caregivers per hour) with statistically significant differences in activity compared to 0800-2400 (p < 0.05). Caregiver activity was highest between 1200 and 1600 (1.02 ± .031 caregivers per hour) with a statistically significant difference in activity comparedto activity from 1600 to 0800 (p < 0.05). The three most dominant predictors of workeractivity were patient motion (Standardized Dominance 78.6%), Mechanical Ventilation(Standardized Dominance 7.9%) and Delirium (Standardized Dominance 6.2%). CONCLUSION Ambient Intelligence could potentially be used to derive a single standardized metricthat could be applied to patients to illustrate their overall workload. This could be usedto predict workflow demands for better staff deployment, monitoring of caregiver workload, and potentially as a tool to predict burnout.
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Affiliation(s)
- Peter Y Chan
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia; School of Public Health and Prevention Medicine, Monash University, Melbourne, Victoria, Australia.
| | - Andrew Tay
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - David Chen
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - Maria De Freitas
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - Coralie Millet
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - Thanh Nguyen-Duc
- School of Public Health and Prevention Medicine, Monash University, Melbourne, Victoria, Australia
| | - Graeme Duke
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - Jessica Lyall
- Department of Intensive Care Medicine, Eastern Health, Melbourne, Victoria, Australia
| | - John T Nguyen
- School of Public Health and Prevention Medicine, Monash University, Melbourne, Victoria, Australia
| | - John McNeil
- School of Public Health and Prevention Medicine, Monash University, Melbourne, Victoria, Australia
| | - Ingrid Hopper
- School of Public Health and Prevention Medicine, Monash University, Melbourne, Victoria, Australia
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Akbarian S, Nelder MP, Russell CB, Cawston T, Moreno L, Patel SN, Allen VG, Dolatabadi E. A Computer Vision Approach to Identifying Ticks Related to Lyme Disease. IEEE JOURNAL OF TRANSLATIONAL ENGINEERING IN HEALTH AND MEDICINE 2022; 10:4900308. [PMID: 35492508 PMCID: PMC9037821 DOI: 10.1109/jtehm.2021.3137956] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/14/2021] [Revised: 11/06/2021] [Accepted: 12/09/2021] [Indexed: 11/27/2022]
Abstract
Background: Lyme disease (caused by Borrelia burgdorferi) is an infectious disease transmitted to humans by a bite from infected blacklegged ticks (Ixodes scapularis) in eastern North America. Lyme disease can be prevented if antibiotic prophylaxis is given to a patient within 72 hours of a blacklegged tick bite. Therefore, recognizing a blacklegged tick could facilitate the management of Lyme disease. Methods: In this work, we build an automated detection tool that can differentiate blacklegged ticks from other tick species using advanced computer vision approaches in real-time. Specially, we use convolution neural network models, trained end-to-end, to classify tick species. Also, advanced knowledge transfer techniques are adopted to improve the performance of convolution neural network models. Results: Our best convolution neural network model achieves 92% accuracy on unseen tick species. Conclusion: Our proposed vision-based approach simplifies tick identification and contributes to the emerging work on public health surveillance of ticks and tick-borne diseases. In addition, it can be integrated with the geography of exposure and potentially be leveraged to inform the risk of Lyme disease infection. This is the first report of using deep learning technologies to classify ticks, providing the basis for automation of tick surveillance, and advancing tick-borne disease ecology and risk management.
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Affiliation(s)
- Sina Akbarian
- Public Health Ontario Toronto ON M5G 1M1 Canada
- Vector Institute for Artificial Intelligence Toronto ON M5G 1M1 Canada
| | - Mark P Nelder
- Enteric, Zoonotic and Vector-Borne Diseases, Health Protection, Operations and ResponsePublic Health Ontario Toronto ON M5G 1M1 Canada
| | - Curtis B Russell
- Enteric, Zoonotic and Vector-Borne Diseases, Health Protection, Operations and ResponsePublic Health Ontario Toronto ON M5G 1M1 Canada
| | - Tania Cawston
- Public Health LaboratoriesPublic Health Ontario Sault Ste. Marie ON P6B 0A9 Canada
| | - Laurent Moreno
- Innovations and Partnerships OfficeUniversity of Toronto Toronto ON M5S 1A1 Canada
| | - Samir N Patel
- Department of Laboratory Medicine and PathobiologyUniversity of Toronto Toronto ON M5S 1A1 Canada
- Medical MicrobiologyPublic Health Ontario Toronto ON M5G 1M1 Canada
| | - Vanessa G Allen
- Department of Laboratory Medicine and PathobiologyUniversity of Toronto Toronto ON M5S 1A1 Canada
- Medical MicrobiologyPublic Health Ontario Toronto ON M5G 1M1 Canada
| | - Elham Dolatabadi
- Vector Institute for Artificial Intelligence Toronto ON M5G 1M1 Canada
- Institute of Health Policy, Management and Evaluation, University of Toronto Toronto ON M5S 1A1 Canada
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